BLASTX nr result
ID: Rheum21_contig00032593
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00032593
(296 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006442194.1| hypothetical protein CICLE_v10020011mg [Citr... 80 4e-13
ref|XP_006442193.1| hypothetical protein CICLE_v10020011mg [Citr... 80 4e-13
emb|CBI24939.3| unnamed protein product [Vitis vinifera] 80 4e-13
ref|XP_006492786.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
gb|EXB68332.1| hypothetical protein L484_004678 [Morus notabilis] 71 2e-10
ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_002517779.1| pentatricopeptide repeat-containing protein,... 70 4e-10
gb|EMJ20528.1| hypothetical protein PRUPE_ppa019225mg, partial [... 67 2e-09
gb|EXB68330.1| hypothetical protein L484_004676 [Morus notabilis] 67 3e-09
gb|ESW14490.1| hypothetical protein PHAVU_008G285500g [Phaseolus... 66 4e-09
gb|EOX96641.1| Tetratricopeptide repeat-like superfamily protein... 64 3e-08
gb|EOX96640.1| Tetratricopeptide repeat-like superfamily protein... 64 3e-08
ref|XP_004308684.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
ref|XP_006344375.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_004244962.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_004244961.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_003599420.1| Pentatricopeptide repeat-containing protein ... 60 4e-07
ref|XP_002877905.1| pentatricopeptide repeat-containing protein ... 56 4e-06
>ref|XP_006442194.1| hypothetical protein CICLE_v10020011mg [Citrus clementina]
gi|557544456|gb|ESR55434.1| hypothetical protein
CICLE_v10020011mg [Citrus clementina]
Length = 338
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKMLEMQNRSGTKLI 181
GD++KM +LF +MKE +C PD++TFATMIQAY A GMTE AQ++++KM+ M+ SG KLI
Sbjct: 277 GDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAMKENSGKKLI 336
>ref|XP_006442193.1| hypothetical protein CICLE_v10020011mg [Citrus clementina]
gi|557544455|gb|ESR55433.1| hypothetical protein
CICLE_v10020011mg [Citrus clementina]
Length = 471
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKMLEMQNRSGTKLI 181
GD++KM +LF +MKE +C PD++TFATMIQAY A GMTE AQ++++KM+ M+ SG KLI
Sbjct: 410 GDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAMKENSGKKLI 469
>emb|CBI24939.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 79.7 bits (195), Expect = 4e-13
Identities = 35/61 (57%), Positives = 49/61 (80%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKMLEMQNRSGTKLI 181
GD+++M +LF MKE CKPD++TFATMIQAY A+GM E AQ+++ M+ +N+SGT+LI
Sbjct: 424 GDVERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLEVNMITTKNKSGTRLI 483
Query: 182 G 184
G
Sbjct: 484 G 484
>ref|XP_006492786.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Citrus sinensis]
Length = 471
Score = 77.4 bits (189), Expect = 2e-12
Identities = 35/60 (58%), Positives = 48/60 (80%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKMLEMQNRSGTKLI 181
GD++KM +LF +MKE +C PD++TFA MIQAY A GMTE AQ++++KM+ M+ SG KLI
Sbjct: 410 GDVEKMGELFLAMKERHCVPDNITFAVMIQAYHALGMTEAAQNLENKMIAMKENSGKKLI 469
>ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Vitis vinifera]
Length = 538
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/58 (55%), Positives = 46/58 (79%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKMLEMQNRSGTK 175
GD+++M +LF MKE CKPD++TFATMIQAY A+GM E AQ+++ M+ +N+SGT+
Sbjct: 424 GDVERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLEVNMITTKNKSGTR 481
>gb|EXB68332.1| hypothetical protein L484_004678 [Morus notabilis]
Length = 488
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKMLEMQNRSG 169
GD+ M +LFS+MKE C PDS+TFATMI AY A GM E AQD++SKM+ + SG
Sbjct: 426 GDVKSMRQLFSAMKERKCYPDSITFATMIHAYNALGMMEAAQDLESKMIATDDDSG 481
>ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 70.1 bits (170), Expect = 3e-10
Identities = 30/61 (49%), Positives = 46/61 (75%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKMLEMQNRSGTKLI 181
G+L KM +LF +M+E C+PD++TFA MIQ+Y +GMTE Q++++ M+ ++ GTKLI
Sbjct: 420 GNLKKMGELFLAMRERKCEPDNITFACMIQSYNTQGMTEAVQNLENMMISAKSSLGTKLI 479
Query: 182 G 184
G
Sbjct: 480 G 480
>ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543051|gb|EEF44586.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 486
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKMLEMQNRSG 169
GD+DKM +LF M+E C PD+VTFATMIQAY+ +GMTE AQ ++ ML + SG
Sbjct: 424 GDVDKMAELFLEMRERECMPDNVTFATMIQAYRGQGMTEAAQALEKMMLAAKGNSG 479
>gb|EMJ20528.1| hypothetical protein PRUPE_ppa019225mg, partial [Prunus persica]
Length = 473
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/49 (59%), Positives = 40/49 (81%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKML 148
GD+ K+++LF +MKE C PD +TFATMIQAY A+GMTE A+D+Q +M+
Sbjct: 419 GDVRKVSELFLAMKEKKCLPDHITFATMIQAYNARGMTEAAEDLQKRMI 467
>gb|EXB68330.1| hypothetical protein L484_004676 [Morus notabilis]
Length = 445
Score = 66.6 bits (161), Expect = 3e-09
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKML 148
GD+ M +LFS+MKE C PD +TFATMI AY A GM E AQD++SKM+
Sbjct: 392 GDVKSMRQLFSAMKERKCYPDGITFATMIHAYNALGMMEAAQDLESKMI 440
>gb|ESW14490.1| hypothetical protein PHAVU_008G285500g [Phaseolus vulgaris]
gi|561015630|gb|ESW14491.1| hypothetical protein
PHAVU_008G285500g [Phaseolus vulgaris]
Length = 433
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKMLEMQNRSGTKLI 181
GDL KM +LF +M+E C+PD++TFA+MI AY +GMTE AQ +++ M+ +N KLI
Sbjct: 372 GDLKKMCELFMAMRERKCEPDNITFASMILAYNTQGMTEAAQKLENMMISAKNNLDIKLI 431
>gb|EOX96641.1| Tetratricopeptide repeat-like superfamily protein isoform 2
[Theobroma cacao] gi|508704746|gb|EOX96642.1|
Tetratricopeptide repeat-like superfamily protein
isoform 2 [Theobroma cacao] gi|508704747|gb|EOX96643.1|
Tetratricopeptide repeat-like superfamily protein
isoform 2 [Theobroma cacao]
Length = 492
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKMLEMQNRS 166
GDL KM +LF M+E C PD++TFATMIQAY GM E AQ++++K++ S
Sbjct: 425 GDLKKMGELFLMMEEKKCMPDNITFATMIQAYNTHGMIEAAQNLENKLISTNKNS 479
>gb|EOX96640.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao]
Length = 549
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKMLEMQNRS 166
GDL KM +LF M+E C PD++TFATMIQAY GM E AQ++++K++ S
Sbjct: 458 GDLKKMGELFLMMEEKKCMPDNITFATMIQAYNTHGMIEAAQNLENKLISTNKNS 512
>ref|XP_004308684.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Fragaria vesca subsp. vesca]
Length = 462
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 6/59 (10%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKML------EMQN 160
GD++KM +LF +M+E C PD +TFATMIQA KA GMT A+D++ +M+ EM+N
Sbjct: 404 GDINKMGELFLTMEEKKCVPDHITFATMIQACKALGMTAAAEDLKKRMITTIDHSEMEN 462
>ref|XP_006344375.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Solanum tuberosum]
Length = 482
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKML 148
GD+++M LF MK CKPD +TF+TMIQAY ++GMTE A D+++K++
Sbjct: 400 GDIERMVALFLEMKVRKCKPDYITFSTMIQAYNSQGMTEAAMDLKTKII 448
>ref|XP_004244962.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like isoform 2 [Solanum lycopersicum]
Length = 454
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKML 148
GD+++M LF MK CKPD +TF+TMIQAY ++GMTE A D++++M+
Sbjct: 401 GDIERMVALFLEMKVRKCKPDYITFSTMIQAYNSQGMTEAAMDLKTEMI 449
>ref|XP_004244961.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like isoform 1 [Solanum lycopersicum]
Length = 466
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKML 148
GD+++M LF MK CKPD +TF+TMIQAY ++GMTE A D++++M+
Sbjct: 401 GDIERMVALFLEMKVRKCKPDYITFSTMIQAYNSQGMTEAAMDLKTEMI 449
>ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/49 (55%), Positives = 38/49 (77%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKML 148
G++ KM +LF MKE C PD +TFATMI+A KA+GMTE AQ +++K++
Sbjct: 423 GNVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEDAQRLENKLI 471
>ref|XP_003599420.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488468|gb|AES69671.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 511
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKMLEMQNRSGTKLI 181
GDL KM +LF +M+ C+PD TF MIQAY +G+TE A+++++ M+ ++ SG
Sbjct: 428 GDLKKMGELFLAMRARKCEPDRTTFTCMIQAYNTQGITEAAKNLETMMISAKDSSGMLQF 487
Query: 182 GK*FFL*SHYVL 217
+ F YVL
Sbjct: 488 LQSFLWCKFYVL 499
>ref|XP_002877905.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297323743|gb|EFH54164.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 439
Score = 56.2 bits (134), Expect = 4e-06
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +2
Query: 2 GDLDKMNKLFSSMKEYNCKPDSVTFATMIQAYKAKGMTETAQDIQSKML 148
GDL M +L+ M+E CKPD +TFATMI+ YKA G+ + Q+++ +M+
Sbjct: 379 GDLATMKELYIQMEERKCKPDKITFATMIKTYKAHGIFDAVQELEKQMI 427