BLASTX nr result

ID: Rheum21_contig00032573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032573
         (291 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350000.1| PREDICTED: chlorophyll a-b binding protein 8...   148   6e-34
ref|XP_004251826.1| PREDICTED: chlorophyll a-b binding protein 8...   148   6e-34
gb|AAF44703.1|AF241525_1 chlorophyll a/b-binding protein type II...   148   6e-34
prf||1609235A chlorophyll a/b binding protein                         148   8e-34
sp|P27522.1|CB13_SOLLC RecName: Full=Chlorophyll a-b binding pro...   148   8e-34
ref|XP_006360010.1| PREDICTED: chlorophyll a-b binding protein 8...   148   8e-34
ref|XP_004248217.1| PREDICTED: chlorophyll a-b binding protein 8...   148   8e-34
gb|AGV54446.1| chlorophyll A/B binding protein 8 [Phaseolus vulg...   145   4e-33
sp|Q32904.1|CB23_PEA RecName: Full=Chlorophyll a-b binding prote...   144   9e-33
ref|XP_003545381.1| PREDICTED: chlorophyll a-b binding protein 3...   144   9e-33
pdb|3LW5|3 Chain 3, Improved Model Of Plant Photosystem I             144   9e-33
gb|ACU23907.1| unknown [Glycine max]                                  144   9e-33
ref|NP_001276264.1| chlorophyll a-b binding protein 3, chloropla...   144   9e-33
ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8...   144   1e-32
pdb|2WSC|3 Chain 3, Improved Model Of Plant Photosystem I gi|268...   144   1e-32
ref|XP_004491629.1| PREDICTED: chlorophyll a-b binding protein 3...   142   3e-32
gb|AFK45661.1| unknown [Medicago truncatula]                          142   3e-32
ref|XP_003618083.1| Chlorophyll a-b binding protein [Medicago tr...   142   3e-32
ref|XP_003618082.1| Chlorophyll a-b binding protein [Medicago tr...   142   3e-32
gb|EPS72213.1| hypothetical protein M569_02545 [Genlisea aurea]       142   5e-32

>ref|XP_006350000.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
           [Solanum tuberosum]
          Length = 273

 Score =  148 bits (374), Expect = 6e-34
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL
Sbjct: 133 PWFQTGVIPPAGTYNYWADGYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 192

Query: 110 GGSGDPAY 87
           GGSGDPAY
Sbjct: 193 GGSGDPAY 200


>ref|XP_004251826.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
           [Solanum lycopersicum]
          Length = 273

 Score =  148 bits (374), Expect = 6e-34
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL
Sbjct: 133 PWFQTGVIPPAGTYNYWADGYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 192

Query: 110 GGSGDPAY 87
           GGSGDPAY
Sbjct: 193 GGSGDPAY 200


>gb|AAF44703.1|AF241525_1 chlorophyll a/b-binding protein type III [Alonsoa meridionalis]
          Length = 193

 Score =  148 bits (374), Expect = 6e-34
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL
Sbjct: 62  PWFQTGVIPPAGTYNYWADGYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 121

Query: 110 GGSGDPAY 87
           GGSGDPAY
Sbjct: 122 GGSGDPAY 129


>prf||1609235A chlorophyll a/b binding protein
          Length = 273

 Score =  148 bits (373), Expect = 8e-34
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = -2

Query: 287 WFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG 108
           WF+TGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG
Sbjct: 134 WFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG 193

Query: 107 GSGDPAY 87
           GSGDPAY
Sbjct: 194 GSGDPAY 200


>sp|P27522.1|CB13_SOLLC RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
           AltName: Full=LHCI type III CAB-8; Flags: Precursor
           gi|19182|emb|CAA33330.1| Type III chlorophyll
           a/b-binding protein [Solanum lycopersicum]
          Length = 273

 Score =  148 bits (373), Expect = 8e-34
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = -2

Query: 287 WFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG 108
           WF+TGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG
Sbjct: 134 WFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG 193

Query: 107 GSGDPAY 87
           GSGDPAY
Sbjct: 194 GSGDPAY 200


>ref|XP_006360010.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
           [Solanum tuberosum]
          Length = 273

 Score =  148 bits (373), Expect = 8e-34
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = -2

Query: 287 WFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG 108
           WF+TGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG
Sbjct: 134 WFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG 193

Query: 107 GSGDPAY 87
           GSGDPAY
Sbjct: 194 GSGDPAY 200


>ref|XP_004248217.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
           [Solanum lycopersicum]
          Length = 273

 Score =  148 bits (373), Expect = 8e-34
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = -2

Query: 287 WFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG 108
           WF+TGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG
Sbjct: 134 WFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG 193

Query: 107 GSGDPAY 87
           GSGDPAY
Sbjct: 194 GSGDPAY 200


>gb|AGV54446.1| chlorophyll A/B binding protein 8 [Phaseolus vulgaris]
           gi|543177716|gb|AGV54878.1| chlorophyll A/B binding
           protein 3 chloroplastic-like isoform 1 [Phaseolus
           vulgaris] gi|558695564|gb|AHA84135.1| chlorophyll
           a/b-binding protein type III precursor [Phaseolus
           vulgaris] gi|561015677|gb|ESW14538.1| hypothetical
           protein PHAVU_008G289700g [Phaseolus vulgaris]
          Length = 276

 Score =  145 bits (367), Expect = 4e-33
 Identities = 63/68 (92%), Positives = 67/68 (98%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TGV+PPAGTYNYWAD+YTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL
Sbjct: 136 PWFRTGVVPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 195

Query: 110 GGSGDPAY 87
           GGSG+PAY
Sbjct: 196 GGSGEPAY 203


>sp|Q32904.1|CB23_PEA RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic;
           AltName: Full=LHCII type III CAB-3; Flags: Precursor
           gi|309673|gb|AAA84545.1| light harvesting protein [Pisum
           sativum]
          Length = 275

 Score =  144 bits (364), Expect = 9e-33
 Identities = 64/67 (95%), Positives = 66/67 (98%)
 Frame = -2

Query: 287 WFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG 108
           WF+TGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKG G
Sbjct: 136 WFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFG 195

Query: 107 GSGDPAY 87
           GSG+PAY
Sbjct: 196 GSGNPAY 202


>ref|XP_003545381.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
           isoform 1 [Glycine max]
          Length = 276

 Score =  144 bits (364), Expect = 9e-33
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TGV PPAGTYNYWAD+YTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL
Sbjct: 136 PWFRTGVFPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 195

Query: 110 GGSGDPAY 87
           GGSG+PAY
Sbjct: 196 GGSGEPAY 203


>pdb|3LW5|3 Chain 3, Improved Model Of Plant Photosystem I
          Length = 172

 Score =  144 bits (364), Expect = 9e-33
 Identities = 64/67 (95%), Positives = 66/67 (98%)
 Frame = -2

Query: 287 WFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG 108
           WF+TGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKG G
Sbjct: 53  WFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFG 112

Query: 107 GSGDPAY 87
           GSG+PAY
Sbjct: 113 GSGNPAY 119


>gb|ACU23907.1| unknown [Glycine max]
          Length = 276

 Score =  144 bits (364), Expect = 9e-33
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TGV PPAGTYNYWAD+YTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL
Sbjct: 136 PWFRTGVFPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 195

Query: 110 GGSGDPAY 87
           GGSG+PAY
Sbjct: 196 GGSGEPAY 203


>ref|NP_001276264.1| chlorophyll a-b binding protein 3, chloroplastic-like [Glycine max]
           gi|255640167|gb|ACU20374.1| unknown [Glycine max]
          Length = 276

 Score =  144 bits (364), Expect = 9e-33
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TGV PPAGTYNYWAD+YTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL
Sbjct: 136 PWFRTGVFPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 195

Query: 110 GGSGDPAY 87
           GGSG+PAY
Sbjct: 196 GGSGEPAY 203


>ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
           [Cucumis sativus] gi|449532766|ref|XP_004173351.1|
           PREDICTED: chlorophyll a-b binding protein 8,
           chloroplastic-like [Cucumis sativus]
          Length = 273

 Score =  144 bits (363), Expect = 1e-32
 Identities = 65/68 (95%), Positives = 65/68 (95%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWFKTGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEK L
Sbjct: 133 PWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFL 192

Query: 110 GGSGDPAY 87
           GGSGDPAY
Sbjct: 193 GGSGDPAY 200


>pdb|2WSC|3 Chain 3, Improved Model Of Plant Photosystem I
           gi|268612178|pdb|2WSE|3 Chain 3, Improved Model Of Plant
           Photosystem I gi|268612196|pdb|2WSF|3 Chain 3, Improved
           Model Of Plant Photosystem I
          Length = 276

 Score =  144 bits (363), Expect = 1e-32
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TG IPPAGTYNYWAD+YTLFV EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL
Sbjct: 136 PWFRTGFIPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 195

Query: 110 GGSGDPAY 87
           GGSG+PAY
Sbjct: 196 GGSGEPAY 203


>ref|XP_004491629.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
           [Cicer arietinum]
          Length = 276

 Score =  142 bits (359), Expect = 3e-32
 Identities = 63/68 (92%), Positives = 65/68 (95%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRR QDW  PGSMGKQYFLGLEKGL
Sbjct: 136 PWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGL 195

Query: 110 GGSGDPAY 87
           GGSG+PAY
Sbjct: 196 GGSGEPAY 203


>gb|AFK45661.1| unknown [Medicago truncatula]
          Length = 277

 Score =  142 bits (359), Expect = 3e-32
 Identities = 62/68 (91%), Positives = 65/68 (95%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TGVIPPAGTYNYWADNYTLFV+EMA MGFAEHRRFQDW  PGSMGKQYFLGLEKGL
Sbjct: 137 PWFQTGVIPPAGTYNYWADNYTLFVMEMAFMGFAEHRRFQDWYNPGSMGKQYFLGLEKGL 196

Query: 110 GGSGDPAY 87
           GGSG+PAY
Sbjct: 197 GGSGEPAY 204


>ref|XP_003618083.1| Chlorophyll a-b binding protein [Medicago truncatula]
           gi|355519418|gb|AET01042.1| Chlorophyll a-b binding
           protein [Medicago truncatula]
          Length = 573

 Score =  142 bits (359), Expect = 3e-32
 Identities = 62/68 (91%), Positives = 65/68 (95%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TGVIPPAGTYNYWADNYTLFV+EMA MGFAEHRRFQDW  PGSMGKQYFLGLEKGL
Sbjct: 137 PWFQTGVIPPAGTYNYWADNYTLFVMEMAFMGFAEHRRFQDWYNPGSMGKQYFLGLEKGL 196

Query: 110 GGSGDPAY 87
           GGSG+PAY
Sbjct: 197 GGSGEPAY 204



 Score =  140 bits (353), Expect = 2e-31
 Identities = 61/68 (89%), Positives = 64/68 (94%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TGVIPPAGTYNYWADNYTLFV+EMA MGFAEHRR QDW  PGSMGKQYFLGLEKGL
Sbjct: 433 PWFQTGVIPPAGTYNYWADNYTLFVMEMAFMGFAEHRRLQDWYNPGSMGKQYFLGLEKGL 492

Query: 110 GGSGDPAY 87
           GGSG+PAY
Sbjct: 493 GGSGEPAY 500


>ref|XP_003618082.1| Chlorophyll a-b binding protein [Medicago truncatula]
           gi|355519417|gb|AET01041.1| Chlorophyll a-b binding
           protein [Medicago truncatula]
          Length = 557

 Score =  142 bits (359), Expect = 3e-32
 Identities = 62/68 (91%), Positives = 65/68 (95%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TGVIPPAGTYNYWADNYTLFV+EMA MGFAEHRRFQDW  PGSMGKQYFLGLEKGL
Sbjct: 137 PWFQTGVIPPAGTYNYWADNYTLFVMEMAFMGFAEHRRFQDWYNPGSMGKQYFLGLEKGL 196

Query: 110 GGSGDPAY 87
           GGSG+PAY
Sbjct: 197 GGSGEPAY 204



 Score =  140 bits (353), Expect = 2e-31
 Identities = 61/68 (89%), Positives = 64/68 (94%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWF+TGVIPPAGTYNYWADNYTLFV+EMA MGFAEHRR QDW  PGSMGKQYFLGLEKGL
Sbjct: 417 PWFQTGVIPPAGTYNYWADNYTLFVMEMAFMGFAEHRRLQDWYNPGSMGKQYFLGLEKGL 476

Query: 110 GGSGDPAY 87
           GGSG+PAY
Sbjct: 477 GGSGEPAY 484


>gb|EPS72213.1| hypothetical protein M569_02545 [Genlisea aurea]
          Length = 526

 Score =  142 bits (358), Expect = 5e-32
 Identities = 62/68 (91%), Positives = 66/68 (97%)
 Frame = -2

Query: 290 PWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGL 111
           PWFKTGVIPPAGTY+YWAD YTLFV E+ALMGFAEHRR+QDW+KPGSMGKQYFLGLEKGL
Sbjct: 386 PWFKTGVIPPAGTYSYWADPYTLFVFELALMGFAEHRRYQDWSKPGSMGKQYFLGLEKGL 445

Query: 110 GGSGDPAY 87
           GGSGDPAY
Sbjct: 446 GGSGDPAY 453


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