BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032559
         (267 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK40099.1|AF339908_1 RNA helicase SDE3 [Arabidopsis thaliana]     105   5e-21
gb|AAF79736.1|AC005106_17 T25N20.11 [Arabidopsis thaliana]            105   5e-21
ref|NP_172037.1| putative RNA helicase SDE3 [Arabidopsis thalian...   105   5e-21
ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis...   105   6e-21
emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]   105   6e-21
gb|EOY11173.1| P-loop containing nucleoside triphosphate hydrola...   100   2e-19
gb|EOY11170.1| P-loop containing nucleoside triphosphate hydrola...   100   2e-19
gb|EOY11169.1| P-loop containing nucleoside triphosphate hydrola...   100   2e-19
gb|EOY11168.1| P-loop containing nucleoside triphosphate hydrola...   100   2e-19
ref|XP_006418024.1| hypothetical protein EUTSA_v10006684mg [Eutr...   100   2e-19
ref|XP_003610776.1| hypothetical protein MTR_5g006890 [Medicago ...   100   3e-19
ref|XP_002332671.1| hypothetical protein POPTRDRAFT_789212 [Popu...   100   3e-19
ref|XP_006379846.1| RNA helicase SDE3 family protein [Populus tr...    99   5e-19
ref|XP_006306654.1| hypothetical protein CARUB_v10008170mg, part...    99   6e-19
ref|XP_002517101.1| ATP-dependent helicase NAM7, putative [Ricin...    99   8e-19
gb|EOY05735.1| P-loop containing nucleoside triphosphate hydrola...    97   3e-18
ref|XP_006419983.1| hypothetical protein CICLE_v10004283mg [Citr...    96   5e-18
ref|XP_003595606.1| hypothetical protein MTR_2g049990 [Medicago ...    96   7e-18
ref|XP_006489428.1| PREDICTED: probable RNA helicase SDE3-like i...    95   9e-18
ref|XP_006489427.1| PREDICTED: probable RNA helicase SDE3-like i...    95   9e-18

>gb|AAK40099.1|AF339908_1 RNA helicase SDE3 [Arabidopsis thaliana]
          Length = 1002

 Score =  105 bits (263), Expect = 5e-21
 Identities = 49/86 (56%), Positives = 69/86 (80%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           +D+YV G RP+K     F+ +LPLY+IP EIR +IENKE P+ + +GLT RNYA+Y+ TL
Sbjct: 193 VDDYVKGSRPSKVVERSFRNRLPLYEIPKEIREMIENKEFPDDLNEGLTARNYANYYKTL 252

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKG 5
           LIMEEL++EEDM+AY ME V+++++G
Sbjct: 253 LIMEELQLEEDMRAYDMENVSMKRRG 278


>gb|AAF79736.1|AC005106_17 T25N20.11 [Arabidopsis thaliana]
          Length = 1048

 Score =  105 bits (263), Expect = 5e-21
 Identities = 49/86 (56%), Positives = 69/86 (80%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           +D+YV G RP+K     F+ +LPLY+IP EIR +IENKE P+ + +GLT RNYA+Y+ TL
Sbjct: 212 VDDYVKGSRPSKVVERSFRNRLPLYEIPKEIREMIENKEFPDDLNEGLTARNYANYYKTL 271

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKG 5
           LIMEEL++EEDM+AY ME V+++++G
Sbjct: 272 LIMEELQLEEDMRAYDMENVSMKRRG 297


>ref|NP_172037.1| putative RNA helicase SDE3 [Arabidopsis thaliana]
           gi|50401594|sp|Q8GYD9.1|SDE3_ARATH RecName:
           Full=Probable RNA helicase SDE3; AltName: Full=Silencing
           defective protein 3 gi|26450472|dbj|BAC42350.1| unknown
           protein [Arabidopsis thaliana]
           gi|332189722|gb|AEE27843.1| putative RNA helicase SDE3
           [Arabidopsis thaliana]
          Length = 1002

 Score =  105 bits (263), Expect = 5e-21
 Identities = 49/86 (56%), Positives = 69/86 (80%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           +D+YV G RP+K     F+ +LPLY+IP EIR +IENKE P+ + +GLT RNYA+Y+ TL
Sbjct: 193 VDDYVKGSRPSKVVERSFRNRLPLYEIPKEIREMIENKEFPDDLNEGLTARNYANYYKTL 252

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKG 5
           LIMEEL++EEDM+AY ME V+++++G
Sbjct: 253 LIMEELQLEEDMRAYDMENVSMKRRG 278


>ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis vinifera]
           gi|297737082|emb|CBI26283.3| unnamed protein product
           [Vitis vinifera]
          Length = 877

 Score =  105 bits (262), Expect = 6e-21
 Identities = 47/86 (54%), Positives = 65/86 (75%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           +  YV G RPA+P    F+ +LP Y IP ++R ++E K+IP+ + +GLTR NY SYF TL
Sbjct: 189 VQEYVVGSRPARPNTRSFRYRLPQYVIPNDVRELVEGKQIPDTILEGLTRDNYESYFKTL 248

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKG 5
           LIMEE+R+EEDM++Y ME VT+R+KG
Sbjct: 249 LIMEEIRMEEDMRSYDMERVTMRRKG 274


>emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]
          Length = 877

 Score =  105 bits (262), Expect = 6e-21
 Identities = 47/86 (54%), Positives = 65/86 (75%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           +  YV G RPA+P    F+ +LP Y IP ++R ++E K+IP+ + +GLTR NY SYF TL
Sbjct: 189 VQEYVVGSRPARPNARSFRYRLPQYVIPNDVRELVEGKQIPDTILEGLTRDNYESYFKTL 248

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKG 5
           LIMEE+R+EEDM++Y ME VT+R+KG
Sbjct: 249 LIMEEIRMEEDMRSYDMERVTMRRKG 274


>gb|EOY11173.1| P-loop containing nucleoside triphosphate hydrolases superfamily
           protein isoform 6 [Theobroma cacao]
          Length = 847

 Score =  100 bits (250), Expect = 2e-19
 Identities = 44/86 (51%), Positives = 64/86 (74%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           +D YV   RPA+     +K KL  Y IP  +R +IENK +P+V+ +GLT+ NYA++FSTL
Sbjct: 192 VDEYVVSSRPARTTSRGYKSKLSEYPIPKNLREIIENKHVPDVIAEGLTKENYAAFFSTL 251

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKG 5
           L+MEEL +EE+M+++ MECV +R+KG
Sbjct: 252 LVMEELHLEEEMRSHSMECVMMRRKG 277


>gb|EOY11170.1| P-loop containing nucleoside triphosphate hydrolases superfamily
           protein isoform 3 [Theobroma cacao]
          Length = 808

 Score =  100 bits (250), Expect = 2e-19
 Identities = 44/86 (51%), Positives = 64/86 (74%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           +D YV   RPA+     +K KL  Y IP  +R +IENK +P+V+ +GLT+ NYA++FSTL
Sbjct: 192 VDEYVVSSRPARTTSRGYKSKLSEYPIPKNLREIIENKHVPDVIAEGLTKENYAAFFSTL 251

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKG 5
           L+MEEL +EE+M+++ MECV +R+KG
Sbjct: 252 LVMEELHLEEEMRSHSMECVMMRRKG 277


>gb|EOY11169.1| P-loop containing nucleoside triphosphate hydrolases superfamily
           protein isoform 2 [Theobroma cacao]
           gi|508719275|gb|EOY11172.1| P-loop containing nucleoside
           triphosphate hydrolases superfamily protein isoform 2
           [Theobroma cacao]
          Length = 776

 Score =  100 bits (250), Expect = 2e-19
 Identities = 44/86 (51%), Positives = 64/86 (74%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           +D YV   RPA+     +K KL  Y IP  +R +IENK +P+V+ +GLT+ NYA++FSTL
Sbjct: 192 VDEYVVSSRPARTTSRGYKSKLSEYPIPKNLREIIENKHVPDVIAEGLTKENYAAFFSTL 251

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKG 5
           L+MEEL +EE+M+++ MECV +R+KG
Sbjct: 252 LVMEELHLEEEMRSHSMECVMMRRKG 277


>gb|EOY11168.1| P-loop containing nucleoside triphosphate hydrolases superfamily
           protein isoform 1 [Theobroma cacao]
           gi|508719274|gb|EOY11171.1| P-loop containing nucleoside
           triphosphate hydrolases superfamily protein isoform 1
           [Theobroma cacao]
          Length = 882

 Score =  100 bits (250), Expect = 2e-19
 Identities = 44/86 (51%), Positives = 64/86 (74%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           +D YV   RPA+     +K KL  Y IP  +R +IENK +P+V+ +GLT+ NYA++FSTL
Sbjct: 192 VDEYVVSSRPARTTSRGYKSKLSEYPIPKNLREIIENKHVPDVIAEGLTKENYAAFFSTL 251

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKG 5
           L+MEEL +EE+M+++ MECV +R+KG
Sbjct: 252 LVMEELHLEEEMRSHSMECVMMRRKG 277


>ref|XP_006418024.1| hypothetical protein EUTSA_v10006684mg [Eutrema salsugineum]
           gi|557095795|gb|ESQ36377.1| hypothetical protein
           EUTSA_v10006684mg [Eutrema salsugineum]
          Length = 994

 Score =  100 bits (249), Expect = 2e-19
 Identities = 49/86 (56%), Positives = 66/86 (76%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           MD YVTG RP+K     F  +LP Y+IP EIR +IE KEIP  + +GLT +NYA+Y+ TL
Sbjct: 193 MDVYVTGSRPSKVVERRFINRLPRYEIPKEIREMIEMKEIPSDLEEGLTAKNYANYYKTL 252

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKG 5
           LIMEE+++EEDM+AY ME V++R++G
Sbjct: 253 LIMEEIQLEEDMRAYDMENVSMRRRG 278


>ref|XP_003610776.1| hypothetical protein MTR_5g006890 [Medicago truncatula]
           gi|355512111|gb|AES93734.1| hypothetical protein
           MTR_5g006890 [Medicago truncatula]
          Length = 940

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 42/86 (48%), Positives = 64/86 (74%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           +DN+V G RP       +  +LP Y++P +IR ++E  ++P+VV  GLTRR+YASYF TL
Sbjct: 189 VDNFVPGSRPLAKSNRKYVNRLPRYEVPKDIRLLLEGNQVPQVVEDGLTRRSYASYFKTL 248

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKG 5
           +IMEE+++E+DM  Y MEC+T+R++G
Sbjct: 249 IIMEEIQLEDDMSTYDMECITMRRRG 274


>ref|XP_002332671.1| hypothetical protein POPTRDRAFT_789212 [Populus trichocarpa]
          Length = 894

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 51/87 (58%), Positives = 69/87 (79%), Gaps = 2/87 (2%)
 Frame = -3

Query: 259 DNYVT-GVRPAK-PGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFST 86
           D +V+ G RPA+ PGR  +K +LP Y IP +IR +IE K+IP+V+  GLT  NYASYF T
Sbjct: 191 DTFVSAGSRPARAPGRA-YKNRLPRYDIPKDIRALIERKQIPDVIMGGLTIDNYASYFKT 249

Query: 85  LLIMEELRIEEDMKAYYMECVTLRQKG 5
           LLIMEE+++EEDM+++ MECVT+R+KG
Sbjct: 250 LLIMEEIQLEEDMRSHDMECVTMRRKG 276


>ref|XP_006379846.1| RNA helicase SDE3 family protein [Populus trichocarpa]
           gi|550333146|gb|ERP57643.1| RNA helicase SDE3 family
           protein [Populus trichocarpa]
          Length = 894

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 50/87 (57%), Positives = 69/87 (79%), Gaps = 2/87 (2%)
 Frame = -3

Query: 259 DNYVT-GVRPAK-PGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFST 86
           D +++ G RPA+ PGR  +K +LP Y IP +IR +IE K+IP+V+  GLT  NYASYF T
Sbjct: 191 DTFISAGSRPARAPGRA-YKNRLPRYDIPKDIRALIERKQIPDVIMGGLTIDNYASYFKT 249

Query: 85  LLIMEELRIEEDMKAYYMECVTLRQKG 5
           LLIMEE+++EEDM+++ MECVT+R+KG
Sbjct: 250 LLIMEEIQLEEDMRSHDMECVTMRRKG 276


>ref|XP_006306654.1| hypothetical protein CARUB_v10008170mg, partial [Capsella rubella]
           gi|482575365|gb|EOA39552.1| hypothetical protein
           CARUB_v10008170mg, partial [Capsella rubella]
          Length = 1034

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 47/86 (54%), Positives = 66/86 (76%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           +D+YV G RP+K     FK +LP Y+IP EIR +IE KE+P+ + +GLT  NYA+Y+  L
Sbjct: 228 VDDYVMGSRPSKAVERRFKNRLPRYEIPKEIREMIEKKEMPDDLNEGLTANNYANYYKYL 287

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKG 5
           LIMEEL++EEDM+AY ME V+L+++G
Sbjct: 288 LIMEELQLEEDMRAYDMENVSLKRRG 313


>ref|XP_002517101.1| ATP-dependent helicase NAM7, putative [Ricinus communis]
           gi|223543736|gb|EEF45264.1| ATP-dependent helicase NAM7,
           putative [Ricinus communis]
          Length = 882

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 47/87 (54%), Positives = 61/87 (70%)
 Frame = -3

Query: 265 TMDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFST 86
           T+D YV G RP +      K +LP Y IP E+R +IE+K+ P+ V  GLTR NYASYF T
Sbjct: 190 TVDTYVAGSRPMRKAGWALKNRLPRYDIPMEVRELIESKQTPDAVTGGLTRENYASYFKT 249

Query: 85  LLIMEELRIEEDMKAYYMECVTLRQKG 5
           LLIMEE+ +EEDM++Y ME V +R+ G
Sbjct: 250 LLIMEEIHMEEDMRSYDMEGVRMRRMG 276


>gb|EOY05735.1| P-loop containing nucleoside triphosphate hydrolases superfamily
           protein [Theobroma cacao]
          Length = 876

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 44/87 (50%), Positives = 65/87 (74%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           +D +VTG RPA+     FK +LP Y IP +IR ++E+K+ P+V+  GLT+ NYAS+F  L
Sbjct: 191 VDAFVTGSRPARVMDRGFKNRLPRYDIPKDIRELVESKQTPDVIHAGLTKDNYASFFKHL 250

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKGR 2
           LI+EEL++EEDM+AY ME + +R+ G+
Sbjct: 251 LILEELQLEEDMRAYNMENINMRKNGK 277


>ref|XP_006419983.1| hypothetical protein CICLE_v10004283mg [Citrus clementina]
           gi|557521856|gb|ESR33223.1| hypothetical protein
           CICLE_v10004283mg [Citrus clementina]
          Length = 874

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 45/87 (51%), Positives = 64/87 (73%)
 Frame = -3

Query: 265 TMDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFST 86
           ++D YV G RPA+     ++ +LP Y IP +IR +IE K+IP+ +  GLT +NY S+F T
Sbjct: 187 SVDKYVVGSRPARYRGQIYQNRLPRYDIPNDIRELIERKQIPDAITDGLTLKNYTSFFKT 246

Query: 85  LLIMEELRIEEDMKAYYMECVTLRQKG 5
           LLIMEE++++EDM+AY ME VTL +KG
Sbjct: 247 LLIMEEIQLKEDMRAYDMENVTLMRKG 273


>ref|XP_003595606.1| hypothetical protein MTR_2g049990 [Medicago truncatula]
           gi|355484654|gb|AES65857.1| hypothetical protein
           MTR_2g049990 [Medicago truncatula]
          Length = 940

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 41/86 (47%), Positives = 63/86 (73%)
 Frame = -3

Query: 262 MDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFSTL 83
           +DN+V G RP       +  +LP Y++P +IR ++E  ++P+VV  GLTRR+YASYF TL
Sbjct: 189 VDNFVPGSRPLAKSNRKYVNRLPRYEVPKDIRLLLEGNQVPQVVEDGLTRRSYASYFKTL 248

Query: 82  LIMEELRIEEDMKAYYMECVTLRQKG 5
           +IMEE+++E+DM  Y ME +T+R++G
Sbjct: 249 IIMEEIQLEDDMSTYDMEYITMRRRG 274


>ref|XP_006489428.1| PREDICTED: probable RNA helicase SDE3-like isoform X2 [Citrus
           sinensis] gi|568872547|ref|XP_006489429.1| PREDICTED:
           probable RNA helicase SDE3-like isoform X3 [Citrus
           sinensis] gi|568872549|ref|XP_006489430.1| PREDICTED:
           probable RNA helicase SDE3-like isoform X4 [Citrus
           sinensis]
          Length = 874

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 45/87 (51%), Positives = 63/87 (72%)
 Frame = -3

Query: 265 TMDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFST 86
           ++D YV G RPA+     ++ +LP Y IP  IR +IE K+IP+ +  GLT +NY S+F T
Sbjct: 187 SVDKYVVGSRPARYRGQIYQNRLPRYDIPNHIRELIERKQIPDAITDGLTLKNYTSFFKT 246

Query: 85  LLIMEELRIEEDMKAYYMECVTLRQKG 5
           LLIMEE++++EDM+AY ME VTL +KG
Sbjct: 247 LLIMEEIQLKEDMRAYDMENVTLMRKG 273


>ref|XP_006489427.1| PREDICTED: probable RNA helicase SDE3-like isoform X1 [Citrus
           sinensis]
          Length = 891

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 45/87 (51%), Positives = 63/87 (72%)
 Frame = -3

Query: 265 TMDNYVTGVRPAKPGRLPFKKKLPLYKIPPEIRNVIENKEIPEVVFQGLTRRNYASYFST 86
           ++D YV G RPA+     ++ +LP Y IP  IR +IE K+IP+ +  GLT +NY S+F T
Sbjct: 204 SVDKYVVGSRPARYRGQIYQNRLPRYDIPNHIRELIERKQIPDAITDGLTLKNYTSFFKT 263

Query: 85  LLIMEELRIEEDMKAYYMECVTLRQKG 5
           LLIMEE++++EDM+AY ME VTL +KG
Sbjct: 264 LLIMEEIQLKEDMRAYDMENVTLMRKG 290