BLASTX nr result

ID: Rheum21_contig00032458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032458
         (296 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71290.1| hypothetical protein VITISV_019350 [Vitis vinifera]    70   2e-10
emb|CBI23675.3| unnamed protein product [Vitis vinifera]               70   4e-10
ref|XP_002281751.1| PREDICTED: uncharacterized protein LOC100258...    70   4e-10
ref|XP_006354465.1| PREDICTED: uncharacterized protein LOC102581...    59   9e-07
ref|XP_004247932.1| PREDICTED: uncharacterized protein LOC101263...    55   7e-06

>emb|CAN71290.1| hypothetical protein VITISV_019350 [Vitis vinifera]
          Length = 937

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 44/76 (57%), Positives = 50/76 (65%)
 Frame = -3

Query: 294 GAGGKVTAAMPNCKPLTPLSDKSKALLSTSSTNRSTGKEKPRSVSRGPAVSRKPEMRAMP 115
           GAGGKVTA  P+ K LTP+SDK+       S   S GKE PR  SR PAV++KP +RAMP
Sbjct: 14  GAGGKVTAMRPS-KTLTPVSDKAPIETFRKS---SAGKENPRPTSRLPAVTQKPAIRAMP 69

Query: 114 RIDKSSAFGSIGGDGE 67
           RIDK SA    G DGE
Sbjct: 70  RIDKLSA--GNGSDGE 83


>emb|CBI23675.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 44/76 (57%), Positives = 49/76 (64%)
 Frame = -3

Query: 294 GAGGKVTAAMPNCKPLTPLSDKSKALLSTSSTNRSTGKEKPRSVSRGPAVSRKPEMRAMP 115
           GAGGKVTA  P+ K LTP+SDK+       S   S GKE PR  SR PAV +KP +RAMP
Sbjct: 14  GAGGKVTAMRPS-KTLTPVSDKAPIETFRKS---SAGKENPRPTSRLPAVMQKPAIRAMP 69

Query: 114 RIDKSSAFGSIGGDGE 67
           RIDK SA    G DGE
Sbjct: 70  RIDKLSA--GNGSDGE 83


>ref|XP_002281751.1| PREDICTED: uncharacterized protein LOC100258054 [Vitis vinifera]
          Length = 986

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 44/76 (57%), Positives = 49/76 (64%)
 Frame = -3

Query: 294 GAGGKVTAAMPNCKPLTPLSDKSKALLSTSSTNRSTGKEKPRSVSRGPAVSRKPEMRAMP 115
           GAGGKVTA  P+ K LTP+SDK+       S   S GKE PR  SR PAV +KP +RAMP
Sbjct: 14  GAGGKVTAMRPS-KTLTPVSDKAPIETFRKS---SAGKENPRPTSRLPAVMQKPAIRAMP 69

Query: 114 RIDKSSAFGSIGGDGE 67
           RIDK SA    G DGE
Sbjct: 70  RIDKLSA--GNGSDGE 83


>ref|XP_006354465.1| PREDICTED: uncharacterized protein LOC102581990 [Solanum tuberosum]
          Length = 957

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 43/92 (46%), Positives = 52/92 (56%), Gaps = 18/92 (19%)
 Frame = -3

Query: 294 GAGGKV-------TAAMPNCKPLTPLSDKSKALLSTS--STNRSTGKEKPRSVSRGPAV- 145
           GAG K+       TAA    K LTPLS KS A+ S+   S  RS GKE PR  SR  A  
Sbjct: 15  GAGAKINAPPYTTTAAARPSKSLTPLSSKSSAVNSSDGESLRRSIGKENPRPTSRVRAAT 74

Query: 144 ---SRKPEMRAMPRIDK-----SSAFGSIGGD 73
              S+KP +RAMPRIDK     ++A G+ GG+
Sbjct: 75  ASTSQKPALRAMPRIDKAASGTATATGAEGGE 106


>ref|XP_004247932.1| PREDICTED: uncharacterized protein LOC101263160 [Solanum
           lycopersicum]
          Length = 956

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 17/90 (18%)
 Frame = -3

Query: 291 AGGKV------TAAMPNCKPLTPLSDKSKALLSTSSTN--RSTGKEKPRSVSRGPAVS-- 142
           AG K+      T A P+ K LTPLS+KS ++ S    N  RSTGKE PR  SR  A +  
Sbjct: 17  AGAKINVPPSTTTARPS-KSLTPLSNKSSSVNSIGGENLRRSTGKENPRPTSRVRAATAS 75

Query: 141 --RKPEMRAMPRIDK-----SSAFGSIGGD 73
             +KP +RAMPRIDK     ++A G+ GG+
Sbjct: 76  TNQKPVLRAMPRIDKAASGTATATGAEGGE 105


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