BLASTX nr result
ID: Rheum21_contig00032451
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00032451
(355 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777... 101 1e-19
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja... 94 1e-17
gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group... 94 2e-17
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum] 94 2e-17
gb|ABA93844.2| retrotransposon protein, putative, unclassified [... 94 2e-17
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group] 92 6e-17
ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773... 91 2e-16
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group... 87 2e-15
emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group] 86 5e-15
gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indi... 80 4e-13
gb|EMS54188.1| Putative late blight resistance protein-like prot... 77 2e-12
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi... 77 3e-12
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha... 76 5e-12
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp... 76 5e-12
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 76 5e-12
ref|XP_004499523.1| PREDICTED: uncharacterized protein LOC101509... 75 7e-12
ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578... 73 3e-11
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza... 73 3e-11
gb|ABB47941.2| retrotransposon protein, putative, unclassified [... 73 3e-11
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat... 73 3e-11
>ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777861 [Setaria italica]
Length = 2179
Score = 101 bits (251), Expect = 1e-19
Identities = 57/113 (50%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Frame = -2
Query: 336 QDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINALR 157
+DL +RSVI RCNS G+LYPF ST LWHRRLGH AL
Sbjct: 531 KDLQTRSVIARCNSTGDLYPFFPAPSSTTAALTTAT-----SSTSLWHRRLGHLGHAALF 585
Query: 156 SL-SSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
L SS + + +CHACQLG+ RLPFS S S +I PFDLIHCDLWTS
Sbjct: 586 QLISSNVISCNKHNTDHVCHACQLGRHVRLPFSVSNSRAIHPFDLIHCDLWTS 638
>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
Length = 1250
Score = 94.4 bits (233), Expect = 1e-17
Identities = 51/110 (46%), Positives = 63/110 (57%)
Frame = -2
Query: 330 LISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINALRSL 151
L +R VI RCNS G+LY QS+ LWHRRLGHPS A+++L
Sbjct: 453 LRTRRVILRCNSRGDLYTLPIAAPAIAAHSFLA------QSSTLWHRRLGHPSSAAIQTL 506
Query: 150 SSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
TK LCHAC+LGK +RLPFS S S + PF+L+HCD+WTS
Sbjct: 507 HKLAILPCTKIDHSLCHACKLGKHTRLPFSRSQSSTSSPFELVHCDVWTS 556
>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108709048|gb|ABF96843.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 594
Score = 94.0 bits (232), Expect = 2e-17
Identities = 50/112 (44%), Positives = 62/112 (55%)
Frame = -2
Query: 336 QDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINALR 157
+D +R VI RCNS GELY S+ LWHRRLGHP A+
Sbjct: 443 KDPQTRRVILRCNSHGELYTLPAAAPSIAAHYNLAT------SSTLWHRRLGHPGPTAVT 496
Query: 156 SLSSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
+L +K LCHACQLGK +RLPF+ STS + PF+L+HCD+WTS
Sbjct: 497 TLQHLSAIPRSKTNNSLCHACQLGKHTRLPFNKSTSSTSSPFELVHCDVWTS 548
>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
Length = 826
Score = 94.0 bits (232), Expect = 2e-17
Identities = 53/113 (46%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = -2
Query: 336 QDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINALR 157
+DL +R+VI RCNS G+LYPF LWHRRLGH AL
Sbjct: 557 KDLQTRNVIARCNSSGDLYPFFPPATSATALLAAP--------ASLWHRRLGHLGREALS 608
Query: 156 SLSSTIPFISTKGI-VRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
L S+ K LCHACQLG+ +RLPFS+STS + FDLIHCDLW S
Sbjct: 609 QLVSSSAISCNKDDDYHLCHACQLGRHTRLPFSTSTSRATNNFDLIHCDLWAS 661
>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1099
Score = 93.6 bits (231), Expect = 2e-17
Identities = 52/116 (44%), Positives = 65/116 (56%)
Frame = -2
Query: 348 WLPGQDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSI 169
W P QD +R+ I RCNS G+LYPF E +TDLWHRRLGH
Sbjct: 451 WDP-QDYPTRTEIVRCNSSGDLYPFPADAFSSAASARTFTATE--STTDLWHRRLGHIGH 507
Query: 168 NALRSLSSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
+AL LS +G +CHA QLG+ RLPF+SS + + F+L+HCDLWTS
Sbjct: 508 DALTRLSQASVIPLPRGAAPVCHAYQLGRHVRLPFTSSFTRASAKFELVHCDLWTS 563
>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1480
Score = 92.4 bits (228), Expect = 6e-17
Identities = 48/112 (42%), Positives = 64/112 (57%)
Frame = -2
Query: 336 QDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINALR 157
+DL +R VI RCNS G+LY +S+ LWH RLGHPS A++
Sbjct: 450 KDLPTRRVILRCNSRGDLYTLPTTVPAITAHSFLA------KSSTLWHHRLGHPSPAAVQ 503
Query: 156 SLSSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
+L T+ +LCHAC LGK +RL FS S+S + PF+L+HCD+WTS
Sbjct: 504 TLHKLAILSCTRSNNKLCHACHLGKHTRLSFSKSSSSTSSPFELVHCDVWTS 555
>ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773259 [Setaria italica]
Length = 1950
Score = 90.9 bits (224), Expect = 2e-16
Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Frame = -2
Query: 336 QDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINALR 157
+DL + VI RCNS G+LY S+ LWH+RLGHP+ AL
Sbjct: 1088 KDLRTGRVILRCNSDGDLYTMPAGTPVAPSHAFLAA------SSTLWHQRLGHPAPAALE 1141
Query: 156 SLSSTIPFISTKGIVR-LCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
L+ I +S + R LCH+CQLGK +RLPFSSS S++ PF+L+HCD+WTS
Sbjct: 1142 RLNK-IHVVSCNKVDRSLCHSCQLGKHTRLPFSSSHSITHAPFELVHCDVWTS 1193
>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1679
Score = 87.4 bits (215), Expect = 2e-15
Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Frame = -2
Query: 336 QDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDL-WHRRLGHPSINAL 160
+DL +R+VI R NS G LY STDL WHRRLGH +AL
Sbjct: 655 KDLRTRTVIARFNSSGPLYSLHHALPPPPAATALLA----NSSTDLLWHRRLGHLGHDAL 710
Query: 159 RSLSSTIPFISTKG-IVRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
L++ +P T+G + +CHACQLG+ RLPF+SSTS + F+L HCDLWTS
Sbjct: 711 NRLAAVVPM--TRGDLTGVCHACQLGRHVRLPFASSTSRASTNFELFHCDLWTS 762
>emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group]
Length = 1455
Score = 85.9 bits (211), Expect = 5e-15
Identities = 47/108 (43%), Positives = 58/108 (53%)
Frame = -2
Query: 336 QDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINALR 157
+D +R VI RCNS GELY S+ LWHRRLGHP A+
Sbjct: 524 KDPQTRRVILRCNSHGELYTLPAAAPSIAAHCNLAT------SSTLWHRRLGHPGPTAVT 577
Query: 156 SLSSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCD 13
+L +K LCHACQLGK +RLPF+ STS + PF+L+HCD
Sbjct: 578 TLQHLSAIPRSKTNNSLCHACQLGKHTRLPFNKSTSSTSSPFELVHCD 625
>gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indica Group]
Length = 964
Score = 79.7 bits (195), Expect = 4e-13
Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Frame = -2
Query: 336 QDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINALR 157
+D SR++I CNS+G+LY ++S+ LWH RLGH AL
Sbjct: 660 KDFHSRNMIVWCNSFGDLY--------LVRPTELHYALAARESSVLWHHRLGHLGSEALT 711
Query: 156 SL--SSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
L SS IP + CHACQLG+ RLPF++S + + FDLIHCDLWTS
Sbjct: 712 RLARSSVIPPYRELSV---CHACQLGRHCRLPFNTSFTRATSNFDLIHCDLWTS 762
>gb|EMS54188.1| Putative late blight resistance protein-like protein R1B-14
[Triticum urartu]
Length = 770
Score = 77.0 bits (188), Expect = 2e-12
Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Frame = -2
Query: 336 QDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINALR 157
+DL ++ I R NS G+LY S LWHRRLGHP
Sbjct: 520 KDLQTKMEIARFNSSGDLYTVDNASSSSSHAMLA--------SVGLWHRRLGHPHSGTTT 571
Query: 156 SL--SSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
+L +P+ LCHACQ+GK LPF +S++ S PF+L+HCDLWTS
Sbjct: 572 TLLREFQLPYDRDSHDPSLCHACQMGKHVHLPFGTSSTRSSFPFELLHCDLWTS 625
>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1402
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/72 (48%), Positives = 43/72 (59%)
Frame = -2
Query: 222 EHQQSTDLWHRRLGHPSINALRSLSSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVS 43
+ S ++WHRRLGHP L+ L T K LC ACQLGK +RLPF SS+ S
Sbjct: 459 QQSASDEVWHRRLGHPHPQVLQQLVKTNSISINKTSKSLCEACQLGKSTRLPFVSSSFTS 518
Query: 42 IRPFDLIHCDLW 7
RP + +HCDLW
Sbjct: 519 NRPLERVHCDLW 530
>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
Length = 1392
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Frame = -2
Query: 216 QQSTD--LWHRRLGHPSINALRSLSSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVS 43
QQS+D +WH+RLGHP+ L+ L T + K +C ACQ+GK RLPF +S VS
Sbjct: 453 QQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSNMCEACQMGKVCRLPFVASEFVS 512
Query: 42 IRPFDLIHCDLW 7
RP + IHCDLW
Sbjct: 513 SRPLERIHCDLW 524
>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
Length = 1296
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = -2
Query: 336 QDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINALR 157
+DL +R+ + RC+S G LY ++ + +WHRRLGHPS L
Sbjct: 455 KDLKTRNKLLRCDSSGPLYSVTPSSYPSSHHALAATTSD----SFIWHRRLGHPSSTLLS 510
Query: 156 SLSSTIPFISTK-GIVRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
L S++ K + LC ACQLGK +RLPF +S +++ F+++H D+WTS
Sbjct: 511 HLLSSLSISVPKTDLTSLCQACQLGKHTRLPFFNSNTIASSLFEIVHSDIWTS 563
>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7267767|emb|CAB81170.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1515
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Frame = -2
Query: 216 QQSTD--LWHRRLGHPSINALRSLSSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVS 43
QQS+D +WH+RLGHP+ L+ L T + K +C ACQ+GK RLPF +S VS
Sbjct: 450 QQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSNMCEACQMGKVCRLPFVASEFVS 509
Query: 42 IRPFDLIHCDLW 7
RP + IHCDLW
Sbjct: 510 SRPLERIHCDLW 521
>ref|XP_004499523.1| PREDICTED: uncharacterized protein LOC101509950 [Cicer arietinum]
Length = 370
Score = 75.5 bits (184), Expect = 7e-12
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = -2
Query: 204 DLWHRRLGHPSINALRSLSSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVSIRPFDL 25
DLWH RLGHPS N L + P++S ++C +C L KQSRLPF++S ++S FDL
Sbjct: 237 DLWHLRLGHPSNNVLTHICKHFPYVSFNSY-KICDSCYLAKQSRLPFNASNTISDNAFDL 295
Query: 24 IHCDLW 7
IH D+W
Sbjct: 296 IHMDIW 301
>ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578284 [Solanum tuberosum]
Length = 614
Score = 73.2 bits (178), Expect = 3e-11
Identities = 44/116 (37%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = -2
Query: 342 PGQDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINA 163
P +D + + RC S G+LYP + LWH RLGHP
Sbjct: 471 PVKDFQTGRPVMRCESRGKLYPITNPRAFPSTFAAL--------APSLWHDRLGHPGAPV 522
Query: 162 LRSLSSTIPFISTKGIV--RLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
L SL I I R+CH+C LGK +L F +S S +I PFD+IH DLWTS
Sbjct: 523 LNSLRKN-KLIECNQIKDSRICHSCPLGKHVKLSFYASNSSTIMPFDIIHSDLWTS 577
>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
Length = 1803
Score = 73.2 bits (178), Expect = 3e-11
Identities = 40/112 (35%), Positives = 55/112 (49%)
Frame = -2
Query: 336 QDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINALR 157
+DL ++ V RC+S G+LYP S + WH RLGHP +L
Sbjct: 461 KDLQTQVVKLRCDSPGDLYPLRLPSPHALSATS-------SPSVEHWHLRLGHPGSASLS 513
Query: 156 SLSSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
+ + F K C AC +G RLPF SS+S ++ PF L+H D+WTS
Sbjct: 514 KVLGSFDFQCNKSAPHHCSACHVGTNVRLPFHSSSSQTLFPFQLVHTDVWTS 565
>gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1414
Score = 73.2 bits (178), Expect = 3e-11
Identities = 40/112 (35%), Positives = 55/112 (49%)
Frame = -2
Query: 336 QDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINALR 157
+DL ++ V RC+S G+LYP S + WH RLGHP +L
Sbjct: 461 KDLQTQVVKLRCDSPGDLYPLRLPSPHALSATS-------SPSVEHWHLRLGHPGSASLS 513
Query: 156 SLSSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
+ + F K C AC +G RLPF SS+S ++ PF L+H D+WTS
Sbjct: 514 KVLGSFDFQCNKSAPHHCSACHVGTNVRLPFHSSSSQTLFPFQLVHTDVWTS 565
>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
Length = 1417
Score = 73.2 bits (178), Expect = 3e-11
Identities = 40/112 (35%), Positives = 55/112 (49%)
Frame = -2
Query: 336 QDLISRSVIRRCNSWGELYPFXXXXXXXXXXXXXXXXAEHQQSTDLWHRRLGHPSINALR 157
+DL ++ V RC+S G+LYP S + WH RLGHP +L
Sbjct: 461 KDLQTQVVKLRCDSPGDLYPLRLPSPHALSATS-------SPSVEHWHLRLGHPGSASLS 513
Query: 156 SLSSTIPFISTKGIVRLCHACQLGKQSRLPFSSSTSVSIRPFDLIHCDLWTS 1
+ + F K C AC +G RLPF SS+S ++ PF L+H D+WTS
Sbjct: 514 KVLGSFDFQCNKSAPHHCSACHVGTNVRLPFHSSSSQTLFPFQLVHTDVWTS 565