BLASTX nr result
ID: Rheum21_contig00032368
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00032368
(273 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004248491.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
ref|XP_006360029.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_006407066.1| hypothetical protein EUTSA_v10020856mg [Eutr... 72 1e-10
ref|XP_004488692.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_006477941.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
ref|XP_006442285.1| hypothetical protein CICLE_v10020422mg [Citr... 69 6e-10
gb|EOY13642.1| Pentatricopeptide repeat (PPR) superfamily protei... 69 8e-10
ref|XP_002298921.2| hypothetical protein POPTR_0001s38850g [Popu... 68 1e-09
ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp.... 68 1e-09
ref|XP_006299283.1| hypothetical protein CARUB_v10015437mg [Caps... 67 2e-09
ref|XP_004301959.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
gb|EXC11739.1| hypothetical protein L484_020794 [Morus notabilis] 66 4e-09
ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containi... 66 5e-09
ref|XP_006849944.1| hypothetical protein AMTR_s00022p00130870 [A... 65 7e-09
ref|NP_188076.1| pentatricopeptide repeat-containing protein [Ar... 64 2e-08
ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08
gb|EPS67170.1| hypothetical protein M569_07606 [Genlisea aurea] 63 5e-08
ref|XP_003581673.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera] 63 5e-08
ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [S... 62 6e-08
>ref|XP_004248491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Solanum lycopersicum]
Length = 387
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +3
Query: 3 RRSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMW 182
+R +AK M +M+ + PSF+S+K++ L + L+ D DWVLKQMVR+GFVPRMGMW
Sbjct: 303 KRFLEAKNFMSVMIDKRVNPSFESYKVIVHGLCDGKLVGDLDWVLKQMVRHGFVPRMGMW 362
Query: 183 CKAL 194
K L
Sbjct: 363 KKIL 366
>ref|XP_006360029.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Solanum tuberosum]
Length = 387
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/64 (50%), Positives = 45/64 (70%)
Frame = +3
Query: 3 RRSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMW 182
+R +AK M +M+ + PSF+S+K++ L + L+ D DWVLKQM+R+GFVPRMGMW
Sbjct: 303 KRYLEAKDFMAVMIDKRVNPSFESYKVIVHGLCDGKLVGDLDWVLKQMMRHGFVPRMGMW 362
Query: 183 CKAL 194
K L
Sbjct: 363 RKIL 366
>ref|XP_006407066.1| hypothetical protein EUTSA_v10020856mg [Eutrema salsugineum]
gi|557108212|gb|ESQ48519.1| hypothetical protein
EUTSA_v10020856mg [Eutrema salsugineum]
Length = 404
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/64 (48%), Positives = 46/64 (71%)
Frame = +3
Query: 3 RRSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMW 182
+R+ +AK++M M+S G +PSF S+K + + L E +E+ DWVL+QMV +GFVP+ GMW
Sbjct: 316 KRNLEAKEMMSQMISWGMRPSFVSYKKMVLGLCETKSVEEMDWVLRQMVNHGFVPKTGMW 375
Query: 183 CKAL 194
K L
Sbjct: 376 WKVL 379
>ref|XP_004488692.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cicer arietinum]
Length = 398
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/60 (50%), Positives = 46/60 (76%)
Frame = +3
Query: 3 RRSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMW 182
+R +AK+++ MV++G+ PS+DS+K L + +EGL+E+ +W +K MVR GFVPRMGMW
Sbjct: 316 KRFCEAKEVVEKMVAKGFVPSYDSYKGLILGYCKEGLVEEVEWGVKGMVRMGFVPRMGMW 375
>ref|XP_006477941.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Citrus sinensis]
Length = 404
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +3
Query: 3 RRSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMW 182
+R +AK+++G M+ PSF S+K L L + L+ED DWVLK+MV+ GFVPRMGMW
Sbjct: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVPRMGMW 376
>ref|XP_006442285.1| hypothetical protein CICLE_v10020422mg [Citrus clementina]
gi|557544547|gb|ESR55525.1| hypothetical protein
CICLE_v10020422mg [Citrus clementina]
Length = 404
Score = 68.9 bits (167), Expect = 6e-10
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +3
Query: 3 RRSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMW 182
+R +AK+++G M+ PSF S+K L L + L+ED DWVLK MV+ GFVPRMGMW
Sbjct: 317 KRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKTMVQQGFVPRMGMW 376
>gb|EOY13642.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 408
Score = 68.6 bits (166), Expect = 8e-10
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +3
Query: 6 RSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMWC 185
R +AK++MG M+ PSFDS+K L +E L+ + DW LKQMV+ GFVP+MGMW
Sbjct: 325 RFMEAKELMGRMILERVSPSFDSYKKLIHGFCKEKLVREVDWALKQMVQQGFVPKMGMWT 384
Query: 186 KALE 197
+ ++
Sbjct: 385 QMVK 388
>ref|XP_002298921.2| hypothetical protein POPTR_0001s38850g [Populus trichocarpa]
gi|550349209|gb|EEE83726.2| hypothetical protein
POPTR_0001s38850g [Populus trichocarpa]
Length = 292
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = +3
Query: 15 DAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMWCKAL 194
+ K+ M M+ +G PSF S+K L L +E LL D DWVLKQM R GFVP+MGMW + +
Sbjct: 209 EGKEFMVRMIGQGVDPSFVSYKKLVHGLCKERLLRDLDWVLKQMARQGFVPKMGMWVQMV 268
Query: 195 EKM 203
+ +
Sbjct: 269 QSV 271
>ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328724|gb|EFH59143.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 409
Score = 67.8 bits (164), Expect = 1e-09
Identities = 29/64 (45%), Positives = 46/64 (71%)
Frame = +3
Query: 3 RRSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMW 182
+R+ +AK++M M+S G +PSF S+K + + L E + + DWVL++MV +GFVP+ GMW
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVAEMDWVLRKMVNHGFVPKTGMW 380
Query: 183 CKAL 194
KA+
Sbjct: 381 WKAV 384
>ref|XP_006299283.1| hypothetical protein CARUB_v10015437mg [Capsella rubella]
gi|482567992|gb|EOA32181.1| hypothetical protein
CARUB_v10015437mg [Capsella rubella]
Length = 408
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/62 (46%), Positives = 44/62 (70%)
Frame = +3
Query: 3 RRSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMW 182
+R+ +AK++M M+S G +PSF S+K + + L E + + DWVL+QMV +GFVP+ GMW
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVAELDWVLRQMVNHGFVPKTGMW 380
Query: 183 CK 188
K
Sbjct: 381 WK 382
>ref|XP_004301959.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 399
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +3
Query: 3 RRSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMW 182
+R +AK+ M MVS+ PSF S+K L L +E +E+ DWVL+QM R GFVP+MGMW
Sbjct: 311 QRFVEAKEFMIRMVSKRVGPSFVSYKQLIQGLCKENKVEELDWVLRQMTRQGFVPKMGMW 370
>gb|EXC11739.1| hypothetical protein L484_020794 [Morus notabilis]
Length = 405
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/66 (45%), Positives = 42/66 (63%)
Frame = +3
Query: 6 RSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMWC 185
R ++A ++M ++S G PS SFK L L EE +ED DW LKQM + GFVP+M MW
Sbjct: 321 RFSEANEVMSRIISMGSSPSIKSFKCLIHGLCEENRMEDIDWALKQMGKQGFVPKMWMWK 380
Query: 186 KALEKM 203
+ L+ +
Sbjct: 381 EILQSL 386
>ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
gi|449503658|ref|XP_004162112.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 65.9 bits (159), Expect = 5e-09
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +3
Query: 15 DAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMW 182
+A+ M M+S G PSF S+K L L ++ L ED DWVLKQMV GFVP++GMW
Sbjct: 321 EARDCMHRMISEGMDPSFVSYKKLLSGLCKKKLTEDVDWVLKQMVMQGFVPKVGMW 376
>ref|XP_006849944.1| hypothetical protein AMTR_s00022p00130870 [Amborella trichopoda]
gi|548853542|gb|ERN11525.1| hypothetical protein
AMTR_s00022p00130870 [Amborella trichopoda]
Length = 404
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = +3
Query: 15 DAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMWCKAL 194
+A +++ LMVS+G PSF S+KML L + LL D D VL QM+ GF+PRMG W + L
Sbjct: 328 EANKLLSLMVSKGIFPSFLSYKMLIDGLCDMDLLRDVDAVLTQMINQGFIPRMGTWMRIL 387
Query: 195 EKM 203
E +
Sbjct: 388 ESL 390
>ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g14580, mitochondrial; Flags: Precursor
gi|9294380|dbj|BAB02390.1| unnamed protein product
[Arabidopsis thaliana] gi|119935972|gb|ABM06049.1|
At3g14580 [Arabidopsis thaliana]
gi|332642020|gb|AEE75541.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = +3
Query: 3 RRSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMW 182
+R+ +AK++M M+S G +PSF S+K + + L E + + DWVL+QMV +GFVP+ MW
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Query: 183 CKALE 197
K ++
Sbjct: 381 WKVVQ 385
>ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Vitis vinifera]
Length = 393
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +3
Query: 6 RSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMWC 185
R AK+ M M+ G PSF S+KM+ L +E L+ D W+LKQMV GFVP MW
Sbjct: 312 RFGKAKEFMCQMIDEGVSPSFVSYKMMIYGLCKENLVADVVWILKQMVEQGFVPERWMWR 371
Query: 186 KALEKM 203
+ L+ M
Sbjct: 372 RILQTM 377
>gb|EPS67170.1| hypothetical protein M569_07606 [Genlisea aurea]
Length = 393
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = +3
Query: 3 RRSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMW 182
+R +AKQ+MG M+ +G PSF+S+K++ E ++D W L QMV GFV RMGMW
Sbjct: 311 KRYEEAKQLMGKMMGKGINPSFESYKLIIRGFCCENAVDDVVWGLNQMVSSGFVARMGMW 370
>ref|XP_003581673.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Brachypodium distachyon]
Length = 392
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/69 (43%), Positives = 40/69 (57%)
Frame = +3
Query: 3 RRSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMW 182
R +AK ++ +M + G +PSF S+K+L L LED + KQMV GF+PRMG W
Sbjct: 296 RNFTEAKDLVCMMSAEGLRPSFSSYKLLIDGLCSVNCLEDGHLIFKQMVDQGFIPRMGTW 355
Query: 183 CKALEKMPL 209
K L M L
Sbjct: 356 TKLLTSMSL 364
>emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
Length = 393
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +3
Query: 6 RSADAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMWC 185
R AK+ M M+ G PSF S+KM+ L +E L+ D W+LKQMV GFVP MW
Sbjct: 312 RFGKAKEFMCQMIDEGVSPSFVSYKMVIYGLCKENLVADVVWILKQMVEQGFVPERWMWR 371
Query: 186 KALEKM 203
+ L+ M
Sbjct: 372 RILQTM 377
>ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
gi|241938290|gb|EES11435.1| hypothetical protein
SORBIDRAFT_06g028710 [Sorghum bicolor]
Length = 363
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = +3
Query: 15 DAKQIMGLMVSRGWKPSFDSFKMLFMALSEEGLLEDADWVLKQMVRYGFVPRMGMWCKAL 194
+AK ++ M + G +PSF S+K+L L E ++DA VLKQMV GFVPRMG W K L
Sbjct: 300 EAKSLVSTMSTEGVRPSFQSYKLLIDGLCSEDCVDDAHLVLKQMVGQGFVPRMGTWTKLL 359