BLASTX nr result
ID: Rheum21_contig00032338
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00032338
(436 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO21746.1| gag-pol polyprotein [Panicum virgatum] 193 2e-47
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 190 2e-46
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 189 4e-46
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group] 189 4e-46
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 188 6e-46
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 188 7e-46
dbj|BAH80072.1| putative unclassified retrotransposon protein [O... 188 7e-46
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group] 188 7e-46
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 188 7e-46
gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japoni... 188 7e-46
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group] 188 7e-46
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group] 188 7e-46
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 188 7e-46
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 187 1e-45
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group] 187 1e-45
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 187 2e-45
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 187 2e-45
gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-... 186 2e-45
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 186 2e-45
gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-... 186 2e-45
>gb|ABO21746.1| gag-pol polyprotein [Panicum virgatum]
Length = 276
Score = 193 bits (491), Expect = 2e-47
Identities = 97/145 (66%), Positives = 106/145 (73%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS S +HL HL V LR LYANL KC F TD FLGYV++
Sbjct: 68 KFVVVYFDDILIYSKSHEEHLDHLRAVFDALRAASLYANLEKCIFCTDRVAFLGYVVTPQ 127
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD KI AIR WPTP T T VRSFLGLAGFYRRFVR+FSTIAAPLHELTKKG W
Sbjct: 128 GIEVDGAKIDAIRSWPTPQTITQVRSFLGLAGFYRRFVRDFSTIAAPLHELTKKGVSFHW 187
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
+ D AF+ LKE L +APLLQLPD
Sbjct: 188 GPAQDQAFDTLKERLTSAPLLQLPD 212
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 190 bits (482), Expect = 2e-46
Identities = 89/145 (61%), Positives = 107/145 (73%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
+FVVVYFDDIL+YS S+ DH HL V LR + L+ NL KC F TD +FLGYV++
Sbjct: 893 RFVVVYFDDILIYSRSIEDHHGHLRAVFDALRDERLFGNLEKCTFCTDRVSFLGYVVTPQ 952
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI WP PTT T VRSFLGLAGFYRRFV++FSTIAAPLHELTK+ TW
Sbjct: 953 GIEVDQAKVEAIHSWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTW 1012
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
+ NAF+ LK+ L +APLLQLPD
Sbjct: 1013 AAAQRNAFDTLKDKLTHAPLLQLPD 1037
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 189 bits (479), Expect = 4e-46
Identities = 89/145 (61%), Positives = 106/145 (73%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
+FVVVYFDDIL+YS S+ DH HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 893 RFVVVYFDDILIYSRSIEDHHGHLRAVFDALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 952
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI WP PTT T VRSFLGLAGFYRRFV++FSTIAAPLHELTK+ TW
Sbjct: 953 GIEVDQAKVEAIHSWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTW 1012
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
+ NAF+ LK+ L +APLLQLPD
Sbjct: 1013 AAAQRNAFDTLKDKLTHAPLLQLPD 1037
>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
Length = 1170
Score = 189 bits (479), Expect = 4e-46
Identities = 89/145 (61%), Positives = 106/145 (73%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
+FVVVYFDDIL+YS S+ DH HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 526 RFVVVYFDDILIYSRSIEDHHGHLRAVFDALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 585
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI WP PTT T VRSFLGLAGFYRRFV++FSTIAAPLHELTK+ TW
Sbjct: 586 GIEVDQAKVEAIHSWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTW 645
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
+ NAF+ LK+ L +APLLQLPD
Sbjct: 646 AAAQRNAFDTLKDKLTHAPLLQLPD 670
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 188 bits (478), Expect = 6e-46
Identities = 88/145 (60%), Positives = 116/145 (80%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
+FV+VYFDDILVYS SL +H+ HL++VL+ LRK++LYANL KC F TD FLG+V+S D
Sbjct: 1057 RFVIVYFDDILVYSKSLEEHVEHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGFVVSTD 1116
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G++VDEEK+ AIR+WP+P + VRSF GLAGFYRRFV++FST+AAPL E+ KK W
Sbjct: 1117 GVKVDEEKVKAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKW 1176
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
+++ ++AF ALKE L +AP+L LPD
Sbjct: 1177 EQAQEDAFQALKEKLTHAPVLSLPD 1201
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 188 bits (477), Expect = 7e-46
Identities = 89/145 (61%), Positives = 108/145 (74%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS S+ +H HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 1198 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 1257
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI+ WPTP T + VRSFLGLAGFYRRFV++FSTIAAPL+ LTKKG TW
Sbjct: 1258 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 1317
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
S +NAF+ LK+ L +APLLQLPD
Sbjct: 1318 GTSQENAFHMLKDKLTHAPLLQLPD 1342
>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 848
Score = 188 bits (477), Expect = 7e-46
Identities = 89/145 (61%), Positives = 108/145 (74%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS S+ +H HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 229 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 288
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI+ WPTP T + VRSFLGLAGFYRRFV++FSTIAAPL+ LTKKG TW
Sbjct: 289 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 348
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
S +NAF+ LK+ L +APLLQLPD
Sbjct: 349 GTSQENAFHMLKDKLTHAPLLQLPD 373
>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
Length = 1667
Score = 188 bits (477), Expect = 7e-46
Identities = 89/145 (61%), Positives = 108/145 (74%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS S+ +H HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 788 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 847
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI+ WPTP T + VRSFLGLAGFYRRFV++FSTIAAPL+ LTKKG TW
Sbjct: 848 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 907
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
S +NAF+ LK+ L +APLLQLPD
Sbjct: 908 GTSQENAFHMLKDKLTHAPLLQLPD 932
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 188 bits (477), Expect = 7e-46
Identities = 89/145 (61%), Positives = 108/145 (74%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS S+ +H HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 1207 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 1266
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI+ WPTP T + VRSFLGLAGFYRRFV++FSTIAAPL+ LTKKG TW
Sbjct: 1267 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 1326
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
S +NAF+ LK+ L +APLLQLPD
Sbjct: 1327 GTSQENAFHMLKDKLTHAPLLQLPD 1351
>gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1234
Score = 188 bits (477), Expect = 7e-46
Identities = 89/145 (61%), Positives = 108/145 (74%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS S+ +H HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 681 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 740
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI+ WPTP T + VRSFLGLAGFYRRFV++FSTIAAPL+ LTKKG TW
Sbjct: 741 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 800
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
S +NAF+ LK+ L +APLLQLPD
Sbjct: 801 GTSQENAFHMLKDKLTHAPLLQLPD 825
>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
Length = 1667
Score = 188 bits (477), Expect = 7e-46
Identities = 89/145 (61%), Positives = 108/145 (74%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS S+ +H HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 788 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 847
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI+ WPTP T + VRSFLGLAGFYRRFV++FSTIAAPL+ LTKKG TW
Sbjct: 848 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 907
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
S +NAF+ LK+ L +APLLQLPD
Sbjct: 908 GTSQENAFHMLKDKLTHAPLLQLPD 932
>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
Length = 2388
Score = 188 bits (477), Expect = 7e-46
Identities = 89/145 (61%), Positives = 108/145 (74%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS S+ +H HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 701 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 760
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI+ WPTP T + VRSFLGLAGFYRRFV++FSTIAAPL+ LTKKG TW
Sbjct: 761 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 820
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
S +NAF+ LK+ L +APLLQLPD
Sbjct: 821 GTSQENAFHMLKDKLTHAPLLQLPD 845
Score = 109 bits (272), Expect = 4e-22
Identities = 52/104 (50%), Positives = 65/104 (62%)
Frame = +1
Query: 124 KCRFATDTTNFLGYVISKDGLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNF 303
KC F FLG+VIS G+ VD E + A+ DW P T T +RSFLGLAG+YRRF+ NF
Sbjct: 1673 KCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENF 1732
Query: 304 STIAAPLHELTKKGAVVTWKESHDNAFNALKEALCNAPLLQLPD 435
S IA P+ +L KK W + AF LKE L ++P+L LPD
Sbjct: 1733 SKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPD 1776
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 188 bits (477), Expect = 7e-46
Identities = 89/145 (61%), Positives = 108/145 (74%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS S+ +H HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 959 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLKKCTFCTDRVSFLGYVVTPQ 1018
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI+ WPTP T + VRSFLGLAGFYRRFV++FSTIAAPL+ LTKKG TW
Sbjct: 1019 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 1078
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
S +NAF+ LK+ L +APLLQLPD
Sbjct: 1079 GTSQENAFHMLKDKLTHAPLLQLPD 1103
Score = 96.3 bits (238), Expect = 4e-18
Identities = 53/141 (37%), Positives = 78/141 (55%)
Frame = +1
Query: 13 VYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKDGLRV 192
++ DD VY + L +L+ VLQ ++++L N KC F LG+ +S+ G+
Sbjct: 2060 IFMDDFSVYGKTFGHCLQNLDKVLQRCQEKDLVLNWEKCHFMVREGIVLGHRVSERGIEF 2119
Query: 193 DEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTWKESH 372
D KI I P P +RSFLG A FYRRF+++FSTIA PL L K + ++
Sbjct: 2120 DRAKIDVIDQLPPPVNIKGIRSFLGHADFYRRFIKDFSTIARPLTNLLAKDTPFEFDDAC 2179
Query: 373 DNAFNALKEALCNAPLLQLPD 435
+F LK+AL + P++Q PD
Sbjct: 2180 LKSFEILKKALDSGPIIQPPD 2200
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 187 bits (476), Expect = 1e-45
Identities = 89/145 (61%), Positives = 108/145 (74%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS S+ +H HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 865 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 924
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI+ WPTP T + VRSFLGLAGFYRRFV++FSTIAAPL+ LTKKG TW
Sbjct: 925 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTW 984
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
S +NAF+ LK+ L +APLLQLPD
Sbjct: 985 GTSQENAFHMLKDKLTHAPLLQLPD 1009
Score = 156 bits (395), Expect = 2e-36
Identities = 79/145 (54%), Positives = 95/145 (65%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVV+ DDILVYS S DH HL LVL LR+ +LYA LSKC F FLG+VIS
Sbjct: 1657 KFVVVFIDDILVYSQSEEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAK 1716
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD E + A+ DW P T T +RSFLGLAG+YRRF+ NFS IA P+ +L KK W
Sbjct: 1717 GVAVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVW 1776
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
+ AF LKE L ++P+L LPD
Sbjct: 1777 SPQCEKAFQTLKEKLVSSPVLILPD 1801
>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
Length = 1431
Score = 187 bits (476), Expect = 1e-45
Identities = 89/145 (61%), Positives = 108/145 (74%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS S+ +H HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 810 KFVVVYFDDILIYSKSMGEHFKHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 869
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI+ WPTP T + VRSFLGLAGFYRRFV++FSTIAAPL+ LTKKG TW
Sbjct: 870 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 929
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
S +NAF+ LK+ L +APLLQLPD
Sbjct: 930 GTSQENAFHMLKDKLTHAPLLQLPD 954
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 187 bits (474), Expect = 2e-45
Identities = 88/145 (60%), Positives = 105/145 (72%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
+FVVVYFDDIL+YS S+ DH HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 206 RFVVVYFDDILIYSRSIEDHHGHLRAVFDALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 265
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI WP PTT T VRSFLGLAGFYR FV++FSTIAAPLHELTK+ TW
Sbjct: 266 GIEVDQAKVEAIHSWPVPTTITQVRSFLGLAGFYRHFVKDFSTIAAPLHELTKRNVTFTW 325
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
+ NAF+ LK+ L +APLLQLPD
Sbjct: 326 AAAQRNAFDTLKDKLTHAPLLQLPD 350
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 187 bits (474), Expect = 2e-45
Identities = 88/145 (60%), Positives = 106/145 (73%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
+FVVVYFDDIL+YS S+ DH HL V LR L+ NL KC F TD +FL YV++
Sbjct: 893 RFVVVYFDDILIYSRSIEDHHGHLRAVFDALRDARLFGNLEKCTFCTDRVSFLSYVVTPQ 952
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI +WP PTT T VRSFLGLAGFYRRFV++FSTIAAPLHELTK+ TW
Sbjct: 953 GIEVDQAKVEAIHNWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTW 1012
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
+ NAF+ LK+ L +APLLQLPD
Sbjct: 1013 AAAQRNAFDTLKDKLTHAPLLQLPD 1037
>gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77550404|gb|ABA93201.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1297
Score = 186 bits (473), Expect = 2e-45
Identities = 88/145 (60%), Positives = 107/145 (73%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS S+ +H HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 751 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 810
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI+ WPTP T + VRSFLGLAGFYRRFV++FSTI APL+ LTKKG TW
Sbjct: 811 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTITAPLNALTKKGVPFTW 870
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
S +NAF+ LK+ L +APLLQLPD
Sbjct: 871 GTSQENAFHMLKDKLTHAPLLQLPD 895
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 186 bits (473), Expect = 2e-45
Identities = 89/145 (61%), Positives = 108/145 (74%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS +L +H+ H++ VL LRK++LYANL KC F TD FLG+V+S
Sbjct: 868 KFVVVYFDDILIYSKTLEEHVAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGL 927
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G++VDE K+ AI+DWPTP + V+SF GLAGFYRRFVR FSTIAAPL+ELTKKG W
Sbjct: 928 GIQVDESKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQW 987
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
E + AF LK+ L PLL LPD
Sbjct: 988 GEPQEKAFQELKKRLSEGPLLVLPD 1012
>gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
Length = 1238
Score = 186 bits (473), Expect = 2e-45
Identities = 88/145 (60%), Positives = 107/145 (73%)
Frame = +1
Query: 1 KFVVVYFDDILVYSLSLPDHLTHLELVLQCLRKQELYANLSKCRFATDTTNFLGYVISKD 180
KFVVVYFDDIL+YS S+ +H HL V LR L+ NL KC F TD +FLGYV++
Sbjct: 729 KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 788
Query: 181 GLRVDEEKIAAIRDWPTPTTPTMVRSFLGLAGFYRRFVRNFSTIAAPLHELTKKGAVVTW 360
G+ VD+ K+ AI+ WPTP T + VRSFLGLAGFYRRFV++FSTI APL+ LTKKG TW
Sbjct: 789 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTITAPLNALTKKGVPFTW 848
Query: 361 KESHDNAFNALKEALCNAPLLQLPD 435
S +NAF+ LK+ L +APLLQLPD
Sbjct: 849 GTSQENAFHMLKDKLTHAPLLQLPD 873