BLASTX nr result
ID: Rheum21_contig00032287
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00032287
(288 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 66 4e-09
ref|XP_006586315.1| PREDICTED: uncharacterized protein LOC102664... 66 5e-09
ref|XP_004253303.1| PREDICTED: uncharacterized protein LOC101255... 66 5e-09
ref|XP_004229147.1| PREDICTED: uncharacterized protein LOC101247... 66 5e-09
ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, part... 63 3e-08
ref|XP_004240331.1| PREDICTED: uncharacterized protein LOC101255... 62 6e-08
ref|XP_004253503.1| PREDICTED: uncharacterized protein LOC101243... 62 8e-08
dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606... 62 8e-08
ref|XP_002329612.1| predicted protein [Populus trichocarpa] 61 2e-07
ref|XP_002313562.1| predicted protein [Populus trichocarpa] 61 2e-07
ref|XP_004253231.1| PREDICTED: uncharacterized protein LOC101248... 59 5e-07
ref|XP_004234905.1| PREDICTED: uncharacterized protein LOC101258... 59 5e-07
ref|XP_002331075.1| predicted protein [Populus trichocarpa] 59 5e-07
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 59 5e-07
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript... 59 5e-07
ref|XP_006357282.1| PREDICTED: uncharacterized protein LOC102605... 59 7e-07
ref|XP_002332211.1| predicted protein [Populus trichocarpa] 59 7e-07
ref|XP_006595463.1| PREDICTED: uncharacterized protein LOC102660... 59 9e-07
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 59 9e-07
ref|XP_004239564.1| PREDICTED: uncharacterized protein LOC101259... 58 1e-06
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 66.2 bits (160), Expect = 4e-09
Identities = 27/90 (30%), Positives = 53/90 (58%)
Frame = -1
Query: 285 WNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFRC 106
W+ +W K + P+ +F W++ +HT+D+L+ G + C+LCN+ ES +HL+FRC
Sbjct: 986 WHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCNDLDESREHLFFRC 1045
Query: 105 KYSKEVMQIVLSWGNIGRRFNDVYEWVNCM 16
++S E+ + N+ N ++++C+
Sbjct: 1046 QFSSEIWSFFMRALNL----NPPPQFMHCL 1071
>ref|XP_006586315.1| PREDICTED: uncharacterized protein LOC102664837 [Glycine max]
Length = 97
Score = 65.9 bits (159), Expect = 5e-09
Identities = 30/73 (41%), Positives = 40/73 (54%)
Frame = -1
Query: 285 WNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFRC 106
W + PR S +W+ G + TKD+L G+ Q+ IC LCN ES DHL+F C
Sbjct: 10 WRHLFYRNYARPRASHTTWLACHGRLATKDRLCRFGLIQEKICSLCNEVDESHDHLFFAC 69
Query: 105 KYSKEVMQIVLSW 67
SK+V VL+W
Sbjct: 70 SESKKVWSEVLNW 82
>ref|XP_004253303.1| PREDICTED: uncharacterized protein LOC101255781 [Solanum
lycopersicum]
Length = 174
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/93 (31%), Positives = 50/93 (53%)
Frame = -1
Query: 288 EWNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFR 109
EW C ++ P+ +F W+++ + T D+L G+T D C+LC N ES DH++ +
Sbjct: 49 EWRCLMFKNAARPKATFTLWILLNRKLATVDRLAKWGLTLDKTCVLCKNMDESLDHMFLQ 108
Query: 108 CKYSKEVMQIVLSWGNIGRRFNDVYEWVNCMKI 10
C Y+ EV + +L IG N + W +++
Sbjct: 109 CHYTGEVWERLLKL--IGNHNNRPWTWAQFIQL 139
>ref|XP_004229147.1| PREDICTED: uncharacterized protein LOC101247059 [Solanum
lycopersicum]
Length = 133
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = -1
Query: 285 WNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFRC 106
W C ++ P+ F W+++ + T D+L G+T D C+LC N ES DH++ +C
Sbjct: 18 WKCLMFKNTERPKAIFTLWILMYRKLATVDRLAKWGLTHDTACVLCTNMDESLDHMFLQC 77
Query: 105 KYSKEVMQIVLSW----GNIGRRFNDVYEWV 25
Y EV + VL+W N + + WV
Sbjct: 78 HYVGEVWERVLAWDGLHNNRAKTWTQFVHWV 108
>ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, partial [Capsella rubella]
gi|482569649|gb|EOA33837.1| hypothetical protein
CARUB_v10021318mg, partial [Capsella rubella]
Length = 290
Score = 63.2 bits (152), Expect = 3e-08
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Frame = -1
Query: 285 WNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFRC 106
W +W K P+ +F SW++I+ + T+D+L+ G+ C+LC + +ES HL+F C
Sbjct: 113 WFKSVWFKERIPKHAFISWVVIRNRLTTRDRLRGWGMNVPSECLLCTSSAESRLHLFFEC 172
Query: 105 KYSKEVMQIVLSWGNIG--RRFNDVYEWVNCMKIMK 4
YS EV + ++ F D+ WV + K
Sbjct: 173 AYSHEVWSSFFTHPSLSPPAMFEDIVAWVRSSRSKK 208
>ref|XP_004240331.1| PREDICTED: uncharacterized protein LOC101255200 [Solanum
lycopersicum]
Length = 138
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = -1
Query: 288 EWNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFR 109
EW C + P+ +F W+++ + T D+L G+ D C+LC + ES DH++ +
Sbjct: 22 EWRCLMNKNAARPKATFTLWILLNRKLATVDRLAKWGMALDKTCVLCKSADESIDHMFIQ 81
Query: 108 CKYSKEVMQIVLSW----GNIGRRFNDVYEW 28
C+Y+ EV + +L W N R + +W
Sbjct: 82 CQYAGEVWERLLRWIDNHSNRPRTWTQFIQW 112
>ref|XP_004253503.1| PREDICTED: uncharacterized protein LOC101243694 [Solanum
lycopersicum]
Length = 177
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/91 (31%), Positives = 46/91 (50%)
Frame = -1
Query: 288 EWNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFR 109
EW ++ P+ F W+++ + T D+L G+ D C+LC ES DHL+ +
Sbjct: 17 EWKGLMFKNAARPKAIFTLWILLNRKLATIDRLAKWGVVHDPTCVLCKGADESLDHLFLQ 76
Query: 108 CKYSKEVMQIVLSWGNIGRRFNDVYEWVNCM 16
C Y++EV + VL+W G N W+ M
Sbjct: 77 CHYAEEVWERVLTWA--GFYNNRPRTWIQFM 105
>dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1|
orf147a [Beta vulgaris subsp. vulgaris]
Length = 147
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = -1
Query: 252 PRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFRCKYSKEVMQIVL 73
P+ +F +W+ I + T D+L+ GI D +C+LC N E+ DHL+F C++S E+ +L
Sbjct: 12 PKCTFITWLTILDRLATCDRLQKFGIVCDQLCVLCGNVDETRDHLFFVCEFSYEIWSSLL 71
Query: 72 SWGNIGRRFND 40
W I R D
Sbjct: 72 CWLGIQRTAGD 82
>ref|XP_002329612.1| predicted protein [Populus trichocarpa]
Length = 1046
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/88 (35%), Positives = 46/88 (52%)
Frame = -1
Query: 288 EWNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFR 109
EW+ +W K PR SF WM+++ + T+DKL GI + C LC +E +HL+F
Sbjct: 874 EWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFE 933
Query: 108 CKYSKEVMQIVLSWGNIGRRFNDVYEWV 25
C Y+K + V +I R EW+
Sbjct: 934 CSYTKAIWWDVCDRCDIPRMTKGWDEWI 961
>ref|XP_002313562.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/88 (35%), Positives = 46/88 (52%)
Frame = -1
Query: 288 EWNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFR 109
EW+ +W K PR SF WM+++ + T+DKL GI + C LC +E +HL+F
Sbjct: 159 EWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFE 218
Query: 108 CKYSKEVMQIVLSWGNIGRRFNDVYEWV 25
C Y+K + V +I R EW+
Sbjct: 219 CSYTKAIWWDVCDRCDIPRMTKGWDEWI 246
>ref|XP_004253231.1| PREDICTED: uncharacterized protein LOC101248660 [Solanum
lycopersicum]
Length = 187
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Frame = -1
Query: 288 EWNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFR 109
EW C ++ P+ F W+++ + T D+L G+ D C++C ES +HL+
Sbjct: 34 EWRCLLFKNPARPKACFTLWILMNRKLATVDRLTKWGMILDRGCVMCKRAEESMEHLFIH 93
Query: 108 CKYSKEVMQIVLSWGNI----GRRFNDVYEWVNCMK 13
C Y++ + + +L W N+ + + D +W C+K
Sbjct: 94 CHYAEAIWERLLRWINVQINMPKSWTDFIQW--CVK 127
>ref|XP_004234905.1| PREDICTED: uncharacterized protein LOC101258732 [Solanum
lycopersicum]
Length = 177
Score = 59.3 bits (142), Expect = 5e-07
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = -1
Query: 288 EWNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFR 109
EW ++ P+ F W+++ + T ++ G+ D IC++C ES DHL+ +
Sbjct: 17 EWKGLMFKNAARPKAIFTLWILLNRKLATIHRIAKWGVAHDPICVMCKGADESLDHLFLQ 76
Query: 108 CKYSKEVMQIVLSW 67
C Y++EV + VL+W
Sbjct: 77 CHYAEEVWERVLTW 90
>ref|XP_002331075.1| predicted protein [Populus trichocarpa]
Length = 517
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = -1
Query: 288 EWNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFR 109
EW+ +W K PR SF WM ++ + T+DKL GI + C LC +E +HL+F
Sbjct: 341 EWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFE 400
Query: 108 CKYSKEVMQIVLSWGNIGRRFNDVYEWV 25
C Y+K + V +I R EW+
Sbjct: 401 CSYTKAIWWDVCDRCDIPRMTKGWDEWI 428
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = -1
Query: 285 WNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFRC 106
W +W +TP+ SF W+ ++ + T D++KA Q C LCNN E+ DHL+F C
Sbjct: 1354 WYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCTLCNNAEETRDHLFFSC 1413
Query: 105 KYSKEVMQ 82
+Y+ V +
Sbjct: 1414 QYTSYVWE 1421
>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 323
Score = 59.3 bits (142), Expect = 5e-07
Identities = 23/66 (34%), Positives = 39/66 (59%)
Frame = -1
Query: 285 WNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFRC 106
W +W K P+ +F W+ +HT+D+L G+ +C+LCN E+ DHL+F+C
Sbjct: 154 WQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFFQC 213
Query: 105 KYSKEV 88
++S E+
Sbjct: 214 QFSNEI 219
>ref|XP_006357282.1| PREDICTED: uncharacterized protein LOC102605115 [Solanum tuberosum]
Length = 201
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/73 (32%), Positives = 41/73 (56%)
Frame = -1
Query: 285 WNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFRC 106
W C ++ P+ F W+ ++ ++T D+LK G+ + C+LC ES DH++ RC
Sbjct: 42 WKCLMFQNFARPKAVFTMWLQLQNRLNTTDRLKKWGLDIELKCVLCRLHLESRDHMYTRC 101
Query: 105 KYSKEVMQIVLSW 67
YS++V +L W
Sbjct: 102 PYSQQVWSKLLQW 114
>ref|XP_002332211.1| predicted protein [Populus trichocarpa]
Length = 1386
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = -1
Query: 288 EWNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFR 109
EW+ +W K PR SF WM ++ + T+DKL GI + C LC +E +HL+F
Sbjct: 1214 EWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFE 1273
Query: 108 CKYSKEVMQIVLSWGNIGRRFNDVYEWV 25
C Y+K + V +I R EW+
Sbjct: 1274 CSYTKAIWWDVCDRCDIPRMTKGWDEWI 1301
>ref|XP_006595463.1| PREDICTED: uncharacterized protein LOC102660851 [Glycine max]
Length = 199
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = -1
Query: 252 PRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFRCKYSKEVMQIVL 73
P WM+ G + T D+L G+ Q+ IC LC +ES HL+F C +K V VL
Sbjct: 52 PLAKLTLWMVCHGRLPTMDRLHRFGMIQETICKLCKEKNESLTHLFFECGMTKTVWDQVL 111
Query: 72 SWGNIGRR---FNDVYEWV 25
W N+ R +N+ +W+
Sbjct: 112 HWLNLNHRIKGWNEELDWI 130
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/89 (35%), Positives = 44/89 (49%)
Frame = -1
Query: 288 EWNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFR 109
EW ++G PR +F W+ G + TKD+L G+ D C C+ ES +HL+F
Sbjct: 342 EWKNLLYGNTARPRANFILWLACHGRLSTKDRLCKYGMIDDKSCCFCSE-EESMNHLFFV 400
Query: 108 CKYSKEVMQIVLSWGNIGRRFNDVYEWVN 22
C SK V VL W I +D +W N
Sbjct: 401 CDNSKRVWMEVLQWVQIR---HDPSDWPN 426
>ref|XP_004239564.1| PREDICTED: uncharacterized protein LOC101259935 [Solanum
lycopersicum]
Length = 189
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Frame = -1
Query: 288 EWNCWIWGKINTPRVSFNSWMIIKGGVHTKDKLKAMGITQDDICILCNNCSESPDHLWFR 109
EW C ++ P+ F W+++ + T D+L G+ C++C ES +HL+ +
Sbjct: 34 EWRCLMFKNAARPKAGFTLWILMNRKLATVDRLTKWGMALHRDCVMCKRAEESMEHLFIQ 93
Query: 108 CKYSKEVMQIVLSW----GNIGRRFNDVYEWVNCMK 13
C Y++ + + +L W N+ + + + +W C+K
Sbjct: 94 CHYAEAIWERLLRWINVHSNMPKSWTEFIQW--CVK 127