BLASTX nr result

ID: Rheum21_contig00032191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032191
         (362 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568005.1| serine palmitoyltransferase [Arabidopsis thalia...    61   1e-07
ref|XP_006411997.1| hypothetical protein EUTSA_v10025064mg [Eutr...    61   1e-07
ref|XP_006283649.1| hypothetical protein CARUB_v10004706mg [Caps...    61   1e-07
ref|XP_002867012.1| ATLCB1 [Arabidopsis lyrata subsp. lyrata] gi...    61   1e-07
dbj|BAH20117.1| AT4G36480 [Arabidopsis thaliana]                       61   1e-07
emb|CAB16844.1| serine C-palmitoyltransferase like protein [Arab...    61   1e-07
gb|ACH61906.1| serine palmitoyltransferase long chain base subun...    60   3e-07
ref|XP_003589146.1| Serine palmitoyltransferase [Medicago trunca...    58   1e-06
ref|XP_003615765.1| Serine palmitoyltransferase [Medicago trunca...    57   2e-06
ref|XP_003615764.1| Serine palmitoyltransferase [Medicago trunca...    57   2e-06
gb|ACJ85561.1| unknown [Medicago truncatula] gi|388499306|gb|AFK...    57   2e-06
gb|EXB56496.1| Serine palmitoyltransferase 1 [Morus notabilis]         57   3e-06
ref|XP_004490625.1| PREDICTED: long chain base biosynthesis prot...    56   4e-06
ref|XP_003558334.1| PREDICTED: serine palmitoyltransferase 1-lik...    56   4e-06
ref|XP_002318306.2| aminotransferase class 1 and 2 family protei...    56   6e-06
ref|XP_002269418.2| PREDICTED: serine palmitoyltransferase 1 [Vi...    56   6e-06
emb|CBI27714.3| unnamed protein product [Vitis vinifera]               56   6e-06
gb|EAY87933.1| hypothetical protein OsI_09357 [Oryza sativa Indi...    56   6e-06
gb|EOY26294.1| Long-chain base1 isoform 1 [Theobroma cacao] gi|5...    55   7e-06
gb|AFK40647.1| unknown [Medicago truncatula]                           55   7e-06

>ref|NP_568005.1| serine palmitoyltransferase [Arabidopsis thaliana]
           gi|79326362|ref|NP_001031796.1| serine
           palmitoyltransferase [Arabidopsis thaliana]
           gi|75166171|sp|Q94IB8.1|LCB1_ARATH RecName: Full=Long
           chain base biosynthesis protein 1; Short=AtLCB1;
           AltName: Full=Protein EMBRYO DEFECTIVE 2779; AltName:
           Full=Protein FUMONISIN B1 RESISTANT 11
           gi|14488275|dbj|BAB60898.1| serine palmitoyltransferase
           [Arabidopsis thaliana] gi|21539529|gb|AAM53317.1| serine
           C-palmitoyltransferase like protein [Arabidopsis
           thaliana] gi|23197846|gb|AAN15450.1| serine
           C-palmitoyltransferase like protein [Arabidopsis
           thaliana] gi|332661260|gb|AEE86660.1| serine
           palmitoyltransferase [Arabidopsis thaliana]
           gi|332661261|gb|AEE86661.1| serine palmitoyltransferase
           [Arabidopsis thaliana]
          Length = 482

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP TTVNGKDVVNFASANYLGL+GHEKLL+S
Sbjct: 101 GPHTTVNGKDVVNFASANYLGLIGHEKLLES 131


>ref|XP_006411997.1| hypothetical protein EUTSA_v10025064mg [Eutrema salsugineum]
           gi|557113167|gb|ESQ53450.1| hypothetical protein
           EUTSA_v10025064mg [Eutrema salsugineum]
          Length = 482

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP TTVNGKDVVNFASANYLGL+GHEKLL+S
Sbjct: 101 GPHTTVNGKDVVNFASANYLGLIGHEKLLES 131


>ref|XP_006283649.1| hypothetical protein CARUB_v10004706mg [Capsella rubella]
           gi|482552354|gb|EOA16547.1| hypothetical protein
           CARUB_v10004706mg [Capsella rubella]
          Length = 482

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP TTVNGKDVVNFASANYLGL+GHEKLL+S
Sbjct: 101 GPHTTVNGKDVVNFASANYLGLIGHEKLLES 131


>ref|XP_002867012.1| ATLCB1 [Arabidopsis lyrata subsp. lyrata]
           gi|297312848|gb|EFH43271.1| ATLCB1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 482

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP TTVNGKDVVNFASANYLGL+GHEKLL+S
Sbjct: 101 GPHTTVNGKDVVNFASANYLGLIGHEKLLES 131


>dbj|BAH20117.1| AT4G36480 [Arabidopsis thaliana]
          Length = 482

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP TTVNGKDVVNFASANYLGL+GHEKLL+S
Sbjct: 101 GPHTTVNGKDVVNFASANYLGLIGHEKLLES 131


>emb|CAB16844.1| serine C-palmitoyltransferase like protein [Arabidopsis thaliana]
           gi|7270596|emb|CAB80314.1| serine C-palmitoyltransferase
           like protein [Arabidopsis thaliana]
          Length = 475

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP TTVNGKDVVNFASANYLGL+GHEKLL+S
Sbjct: 101 GPHTTVNGKDVVNFASANYLGLIGHEKLLES 131


>gb|ACH61906.1| serine palmitoyltransferase long chain base subunit [Brassica rapa
           subsp. chinensis] gi|197311352|gb|ACH61907.1| serine
           palmitoyltransferase long chain base subunit [Brassica
           rapa subsp. chinensis]
          Length = 482

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP TTVNGKDVVNFASANYLGL+GH+KLL+S
Sbjct: 101 GPHTTVNGKDVVNFASANYLGLIGHQKLLES 131


>ref|XP_003589146.1| Serine palmitoyltransferase [Medicago truncatula]
           gi|355478194|gb|AES59397.1| Serine palmitoyltransferase
           [Medicago truncatula]
          Length = 543

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP T VNGK+VVNFASANYLGL+GH+KLLDS
Sbjct: 101 GPHTIVNGKEVVNFASANYLGLIGHQKLLDS 131


>ref|XP_003615765.1| Serine palmitoyltransferase [Medicago truncatula]
           gi|355517100|gb|AES98723.1| Serine palmitoyltransferase
           [Medicago truncatula]
          Length = 343

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP T VNGK+V+NFASANYLGL+GH+KLLDS
Sbjct: 101 GPHTIVNGKEVINFASANYLGLIGHQKLLDS 131


>ref|XP_003615764.1| Serine palmitoyltransferase [Medicago truncatula]
           gi|355517099|gb|AES98722.1| Serine palmitoyltransferase
           [Medicago truncatula]
          Length = 479

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP T VNGK+V+NFASANYLGL+GH+KLLDS
Sbjct: 101 GPHTIVNGKEVINFASANYLGLIGHQKLLDS 131


>gb|ACJ85561.1| unknown [Medicago truncatula] gi|388499306|gb|AFK37719.1| unknown
           [Medicago truncatula]
          Length = 480

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP T VNGK+V+NFASANYLGL+GH+KLLDS
Sbjct: 102 GPHTIVNGKEVINFASANYLGLIGHQKLLDS 132


>gb|EXB56496.1| Serine palmitoyltransferase 1 [Morus notabilis]
          Length = 603

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP T +NGK+VVNFASANYLGL+GH+KLLDS
Sbjct: 101 GPHTIINGKEVVNFASANYLGLIGHKKLLDS 131


>ref|XP_004490625.1| PREDICTED: long chain base biosynthesis protein 1-like [Cicer
           arietinum]
          Length = 480

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP T VNGK+VVNFASANYLG +GH+KLLDS
Sbjct: 102 GPHTIVNGKEVVNFASANYLGFIGHQKLLDS 132


>ref|XP_003558334.1| PREDICTED: serine palmitoyltransferase 1-like [Brachypodium
           distachyon]
          Length = 483

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/31 (77%), Positives = 30/31 (96%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP TT++GKDVVNFASANYLGL+G+EK++DS
Sbjct: 103 GPHTTIDGKDVVNFASANYLGLIGNEKIIDS 133


>ref|XP_002318306.2| aminotransferase class 1 and 2 family protein [Populus trichocarpa]
           gi|550326346|gb|EEE96526.2| aminotransferase class 1 and
           2 family protein [Populus trichocarpa]
          Length = 485

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP T +NGKDVVNFASANYLGL GHEK +DS
Sbjct: 104 GPHTIINGKDVVNFASANYLGLTGHEKQIDS 134


>ref|XP_002269418.2| PREDICTED: serine palmitoyltransferase 1 [Vitis vinifera]
          Length = 480

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP T +NGK+VVNF SANYLGL+GHEKLL+S
Sbjct: 98  GPHTVINGKEVVNFTSANYLGLIGHEKLLES 128


>emb|CBI27714.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP T +NGK+VVNF SANYLGL+GHEKLL+S
Sbjct: 101 GPHTVINGKEVVNFTSANYLGLIGHEKLLES 131


>gb|EAY87933.1| hypothetical protein OsI_09357 [Oryza sativa Indica Group]
          Length = 481

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/31 (80%), Positives = 30/31 (96%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP TTV+GK+VVNFASANYLGL+G+EK+LDS
Sbjct: 103 GPHTTVDGKEVVNFASANYLGLIGNEKILDS 133


>gb|EOY26294.1| Long-chain base1 isoform 1 [Theobroma cacao]
           gi|508779039|gb|EOY26295.1| Long-chain base1 isoform 1
           [Theobroma cacao] gi|508779040|gb|EOY26296.1| Long-chain
           base1 isoform 1 [Theobroma cacao]
          Length = 485

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP T +NGK+VVNFASANYLG +GHEKLL+S
Sbjct: 101 GPHTIINGKEVVNFASANYLGFIGHEKLLES 131


>gb|AFK40647.1| unknown [Medicago truncatula]
          Length = 480

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +3

Query: 270 GPLTTVNGKDVVNFASANYLGLVGHEKLLDS 362
           GP T  NGK+V+NFASANYLGL+GH+KLLDS
Sbjct: 102 GPHTIFNGKEVINFASANYLGLIGHQKLLDS 132


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