BLASTX nr result

ID: Rheum21_contig00032143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032143
         (474 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006856524.1| hypothetical protein AMTR_s00046p00133890 [A...    65   1e-08
ref|XP_006453084.1| hypothetical protein CICLE_v10007427mg [Citr...    63   3e-08
emb|CAN68892.1| hypothetical protein VITISV_029859 [Vitis vinifera]    60   4e-07
ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex su...    57   2e-06

>ref|XP_006856524.1| hypothetical protein AMTR_s00046p00133890 [Amborella trichopoda]
           gi|548860405|gb|ERN17991.1| hypothetical protein
           AMTR_s00046p00133890 [Amborella trichopoda]
          Length = 842

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
 Frame = +2

Query: 122 DVLNYVGRAFGVGHMINQTDHGSMGHLPL-NLLAKXXXXXXXXXXXXXXXXXXXXXANAL 298
           DV+ Y+ +AFG G+MINQ D GS     L N + K                      NA 
Sbjct: 202 DVIYYLEKAFGFGYMINQGDGGSSSQQQLSNQVPKASSTPTTNLVAVDSNSDSNVTGNAS 261

Query: 299 ENSMSKTLSDETMDSETLLSRLDMSRTILLRTSN-LPSSNDL 421
           E ++++TLSDET+D E LLS LD+S   L RTS+ LP S DL
Sbjct: 262 EGTLARTLSDETLDYENLLSTLDISGQNLSRTSSGLPFSTDL 303


>ref|XP_006453084.1| hypothetical protein CICLE_v10007427mg [Citrus clementina]
           gi|568840927|ref|XP_006474416.1| PREDICTED: CCR4-NOT
           transcription complex subunit 10-like [Citrus sinensis]
           gi|557556310|gb|ESR66324.1| hypothetical protein
           CICLE_v10007427mg [Citrus clementina]
          Length = 854

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 44/106 (41%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
 Frame = +2

Query: 110 FLLQDVLNYVGRAFGVGHMINQTDHGSMGHLPLNLLAKXXXXXXXXXXXXXXXXXXXXXA 289
           F   DVL Y+ +AFGVG  +NQ D GSMG    NLLAK                      
Sbjct: 202 FRSADVLIYLEKAFGVG-CVNQVDSGSMGQQSTNLLAKYSSVPSNSSTADASNSDLAATV 260

Query: 290 NALENSMSKTLSDETMDSETL--LSRLDMSRTILLRTSNLPSSNDL 421
           NA EN++S+TLS+ET++ +T+  LS L++S   L R   L SSN+L
Sbjct: 261 NASENALSRTLSEETLEDDTVLALSSLEISGQNLTRPVGL-SSNEL 305


>emb|CAN68892.1| hypothetical protein VITISV_029859 [Vitis vinifera]
          Length = 701

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
 Frame = +2

Query: 116 LQDVLNYVGRAFGVGHMINQTDHGSMGHLPL-NLLAKXXXXXXXXXXXXXXXXXXXXXAN 292
           +Q+++NY+ +AF VG+  +Q D+ S       NL+ K                      N
Sbjct: 47  VQEIINYLEKAFCVGYTASQGDNVSTAQQQSSNLVVKSSSIPSNSTVPDASNSDSVASLN 106

Query: 293 ALENSMSKTLSDETMDSETLLSRLDMSRTILLRTSNLPSSNDL 421
           + EN +S+TLS+ET+D ET+ S LD+    L R + LPS NDL
Sbjct: 107 SSENPLSRTLSEETLDYETMFSALDIGGQNLTRPAGLPSLNDL 149


>ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Vitis
           vinifera]
          Length = 857

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
 Frame = +2

Query: 122 DVLNYVGRAFGVGHMINQTDHGSMGHLPL-NLLAKXXXXXXXXXXXXXXXXXXXXXANAL 298
           +++NY+ +AF VG+  +Q D+ S       NL+ K                      N+ 
Sbjct: 205 EIINYLEKAFCVGYTASQGDNVSTAQQQSSNLVVKSSSIPSNSTVPDASNSDSVASLNSS 264

Query: 299 ENSMSKTLSDETMDSETLLSRLDMSRTILLRTSNLPSSNDL 421
           EN +S+TLS+ET+D ET+ S LD+    L R + LPS NDL
Sbjct: 265 ENPLSRTLSEETLDYETMFSALDIGGQNLTRPAGLPSLNDL 305


Top