BLASTX nr result

ID: Rheum21_contig00032062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032062
         (841 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]   114   6e-23
gb|EPS74526.1| hypothetical protein M569_00243, partial [Genlise...   113   1e-22
ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chlo...   112   1e-22
dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]                110   8e-22
ref|XP_006827835.1| hypothetical protein AMTR_s02071p00004290 [A...   100   6e-19
ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chlo...    87   7e-15
gb|EPS74532.1| hypothetical protein M569_00249, partial [Genlise...    86   2e-14
gb|ABR13296.1| unknown protein [Prunus dulcis]                         85   4e-14
emb|CAN81684.1| hypothetical protein VITISV_002124 [Vitis vinifera]    82   2e-13
ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulg...    72   2e-10
tpg|DAA43628.1| TPA: hypothetical protein ZEAMMB73_498562 [Zea m...    49   3e-08
gb|ESW26361.1| hypothetical protein PHAVU_003G113100g [Phaseolus...    58   4e-06

>emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]
          Length = 142

 Score =  114 bits (284), Expect = 6e-23
 Identities = 55/60 (91%), Positives = 57/60 (95%)
 Frame = +3

Query: 3   STQHRSSKGSRRPTKARKPGSFKKRIPIRRVHNRMDKLTLTRQFGIQFGIFLGRFREGIG 182
           STQHRSSKGSRRPTKARK GSF+K IPIRRVHNRMDKLTLTRQFGI FGIFLGR+REGIG
Sbjct: 82  STQHRSSKGSRRPTKARKSGSFRKWIPIRRVHNRMDKLTLTRQFGIHFGIFLGRYREGIG 141


>gb|EPS74526.1| hypothetical protein M569_00243, partial [Genlisea aurea]
          Length = 66

 Score =  113 bits (282), Expect = 1e-22
 Identities = 54/60 (90%), Positives = 57/60 (95%)
 Frame = +3

Query: 3   STQHRSSKGSRRPTKARKPGSFKKRIPIRRVHNRMDKLTLTRQFGIQFGIFLGRFREGIG 182
           STQHRSSKGSRRPTK RKPGSF+KRIPIRRVHN MDKLTLTRQFGI+F IFLGR+REGIG
Sbjct: 5   STQHRSSKGSRRPTKVRKPGSFRKRIPIRRVHNCMDKLTLTRQFGIKFDIFLGRYREGIG 64


>ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
           sativus]
          Length = 117

 Score =  112 bits (281), Expect = 1e-22
 Identities = 57/66 (86%), Positives = 62/66 (93%)
 Frame = +3

Query: 642 HENMTELVLVTLRDGVEEGRRFSNKGRDPMTSKELNEEPYEVKISCTVL*SGSKGDLSVN 821
           +EN+TELV VTLRDG+EEGRRFSN+ +DPMTSKELNEEPYEVKIS TVL SGSKGDLSVN
Sbjct: 2   NENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISRTVLSSGSKGDLSVN 61

Query: 822 FSTITP 839
           FSTITP
Sbjct: 62  FSTITP 67


>dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]
          Length = 174

 Score =  110 bits (274), Expect = 8e-22
 Identities = 55/61 (90%), Positives = 58/61 (95%), Gaps = 1/61 (1%)
 Frame = +3

Query: 3   STQHRSSKGSRRPTKARKPGSFKKRIPIRRVHNRMDKLTLTRQFG-IQFGIFLGRFREGI 179
           STQHRSSKGSRRPTKARKPGS +K IPIRRVHNRMDKLTLTRQFG IQFGIFLGR+R+GI
Sbjct: 113 STQHRSSKGSRRPTKARKPGSVRKWIPIRRVHNRMDKLTLTRQFGMIQFGIFLGRYRKGI 172

Query: 180 G 182
           G
Sbjct: 173 G 173


>ref|XP_006827835.1| hypothetical protein AMTR_s02071p00004290 [Amborella trichopoda]
           gi|548832465|gb|ERM95251.1| hypothetical protein
           AMTR_s02071p00004290 [Amborella trichopoda]
          Length = 140

 Score =  100 bits (249), Expect = 6e-19
 Identities = 53/73 (72%), Positives = 59/73 (80%)
 Frame = +3

Query: 621 VERVQLKHENMTELVLVTLRDGVEEGRRFSNKGRDPMTSKELNEEPYEVKISCTVL*SGS 800
           +E VQL+HEN TELVLVT RDGVEEGRRFS++ +DP+TSKELNEEPYE         S S
Sbjct: 1   MESVQLEHENATELVLVTPRDGVEEGRRFSSEEKDPITSKELNEEPYE---------SDS 51

Query: 801 KGDLSVNFSTITP 839
           KGDLSVNFSTITP
Sbjct: 52  KGDLSVNFSTITP 64


>ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
           sativus]
          Length = 127

 Score = 87.0 bits (214), Expect = 7e-15
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = +3

Query: 687 VEEGRRFSNKGRDPMTSKELNEEPYEVKISCTVL*SGSKGDLSVNFSTITP 839
           +EEGRRFSN+ +DPMTSKELNEEPYEV+IS TVL SG KGDLSVNFSTITP
Sbjct: 1   MEEGRRFSNEEKDPMTSKELNEEPYEVQISRTVLSSGCKGDLSVNFSTITP 51


>gb|EPS74532.1| hypothetical protein M569_00249, partial [Genlisea aurea]
          Length = 64

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 43/58 (74%), Positives = 49/58 (84%)
 Frame = +3

Query: 615 LKVERVQLKHENMTELVLVTLRDGVEEGRRFSNKGRDPMTSKELNEEPYEVKISCTVL 788
           +K   VQL+HE +T+LVLVTLRD VEEGR FS+  +DPM SKELNEEPYEVKISCTVL
Sbjct: 7   IKNGSVQLEHETVTKLVLVTLRDRVEEGRVFSSAEKDPMNSKELNEEPYEVKISCTVL 64


>gb|ABR13296.1| unknown protein [Prunus dulcis]
          Length = 97

 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 69/147 (46%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
 Frame = -1

Query: 778 HEIFTSYGSSFNSFEVIGSLPLFENLLPSSTPSRRVTRTNSVMFS-CFN*TRSTFNYSRE 602
           HEIFTSYGSSFNSFEVIGS   FENL P STP RRVTRTNSV FS  +N   ST      
Sbjct: 1   HEIFTSYGSSFNSFEVIGSFSSFENLFPYSTPFRRVTRTNSVTFSFIWNLGSST------ 54

Query: 601 DSSFYQTYADPITIF**EQEIFLDQSPCPSFFEN*KDPFQV*ICFHLESGXXXXXXXXXX 422
             SF  TY     IF             PS F      F     + L S           
Sbjct: 55  --SFLFTYF--FIIF-------------PSLF------FFYFFFYSLPS----------- 80

Query: 421 XXXXXXXXXXXLKSHRFDPVESDPFSH 341
                      LKSHRFDPVESDPFSH
Sbjct: 81  ----------FLKSHRFDPVESDPFSH 97


>emb|CAN81684.1| hypothetical protein VITISV_002124 [Vitis vinifera]
          Length = 187

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = +3

Query: 621 VERVQLKHENMTELVLVTLRDGVEEGRRFSNKGRDPMTSKELNEEPYE 764
           +E VQL+HEN+TELVLVTLRDGVEEG+RFSN+  DPMTSKELNEE YE
Sbjct: 1   MESVQLEHENVTELVLVTLRDGVEEGKRFSNEENDPMTSKELNEEXYE 48


>ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435087|ref|YP_004222305.1| hypothetical
           protein BevumaM_p070 [Beta vulgaris subsp. maritima]
           gi|346683178|ref|YP_004842110.1| hypothetical protein
           BemaM_p065 [Beta macrocarpa] gi|9049278|dbj|BAA99288.1|
           orf114a [Beta vulgaris subsp. vulgaris]
           gi|317905640|emb|CBJ14041.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439820|emb|CBJ17532.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|345500096|emb|CBX24914.1| hypothetical protein [Beta
           macrocarpa] gi|384977899|emb|CBL54123.1| hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 114

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 33/35 (94%), Positives = 33/35 (94%)
 Frame = -1

Query: 106 MRLCTLRIGILFLKDPGFRALVGLRDPFDDLCCVE 2
           MRLCTLRIGI FL DPGFRALVGLRDPFDDLCCVE
Sbjct: 1   MRLCTLRIGIHFLTDPGFRALVGLRDPFDDLCCVE 35


>tpg|DAA43628.1| TPA: hypothetical protein ZEAMMB73_498562 [Zea mays]
          Length = 120

 Score = 49.3 bits (116), Expect(2) = 3e-08
 Identities = 23/29 (79%), Positives = 24/29 (82%)
 Frame = -3

Query: 209 CMNRYYYIPSNSFPKPPKENPELDPKLTG 123
           CMNRYY   SN FPK PK+NPELDPKLTG
Sbjct: 95  CMNRYY---SNFFPKLPKKNPELDPKLTG 120



 Score = 35.8 bits (81), Expect(2) = 3e-08
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 264 LFLYSYPIGTAFKSIENF 211
           LFLY YP+GTAF SIENF
Sbjct: 75  LFLYPYPLGTAFASIENF 92


>gb|ESW26361.1| hypothetical protein PHAVU_003G113100g [Phaseolus vulgaris]
          Length = 92

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 26/40 (65%), Positives = 30/40 (75%)
 Frame = +1

Query: 1   LQHNIGHRKDLGDPPKHESQDLSKKGFLSEECITAWISSH 120
           LQ+NIGHRKDL DPP HES DL +  F+ E C+T  ISSH
Sbjct: 53  LQYNIGHRKDLEDPPTHESWDLPENRFIFEGCVTTCISSH 92


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