BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032017
         (274 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily p...   123   3e-26
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ...   123   3e-26
ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr...   122   5e-26
ref|XP_002306741.1| pentatricopeptide repeat-containing family p...   120   1e-25
ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Caps...   117   1e-24
gb|ESW13851.1| hypothetical protein PHAVU_008G231600g [Phaseolus...   117   2e-24
ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi...   116   3e-24
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi...   116   4e-24
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,...   116   4e-24
ref|NP_181820.1| pentatricopeptide repeat-containing protein [Ar...   115   5e-24
gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis...   115   6e-24
ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutr...   115   6e-24
ref|XP_002880012.1| pentatricopeptide repeat-containing protein ...   114   2e-23
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_004250818.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20

>gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 538

 Score =  123 bits (308), Expect = 3e-26
 Identities = 58/90 (64%), Positives = 73/90 (81%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +EE IRPSE TMVSLLNACA LGA+ QG+W+++Y+   +   ELN IV+TA+++MYCKCG
Sbjct: 247 QEEHIRPSEFTMVSLLNACACLGAITQGKWIHDYILKQN--FELNGIVVTAIIDMYCKCG 304

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
             + A +VF TSPK+GLSCWNSMILGLA N
Sbjct: 305 NAEKALQVFTTSPKEGLSCWNSMILGLATN 334


>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518779|gb|AET00403.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  123 bits (308), Expect = 3e-26
 Identities = 56/88 (63%), Positives = 72/88 (81%)
 Frame = +3

Query: 9   EGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCGEV 188
           EG   SE TMVSLLNACAHLGAL+ G+WV++Y+  NH   ELN IV+TA+++MYCKCG V
Sbjct: 257 EGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNH--FELNVIVVTAIIDMYCKCGSV 314

Query: 189 KGARKVFDTSPKKGLSCWNSMILGLANN 272
           + A +VF+T P++GLSCWNS+I+GLA N
Sbjct: 315 ENAVEVFETCPRRGLSCWNSIIIGLAMN 342


>ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cicer arietinum]
          Length = 536

 Score =  122 bits (307), Expect = 4e-26
 Identities = 57/89 (64%), Positives = 72/89 (80%)
 Frame = +3

Query: 6   EEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCGE 185
           EE + PSE TMVSLLNACAHLGAL+ G+WV++Y+  N    ELN IV+TA+++MYCKCG 
Sbjct: 251 EERVEPSEFTMVSLLNACAHLGALQHGKWVHDYIKRN--DFELNVIVLTAIIDMYCKCGS 308

Query: 186 VKGARKVFDTSPKKGLSCWNSMILGLANN 272
           V+ A +VFDT P +GLSCWNS+I+GLA N
Sbjct: 309 VENAIQVFDTYPGRGLSCWNSIIIGLAMN 337


>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Citrus sinensis]
          Length = 534

 Score =  122 bits (306), Expect = 5e-26
 Identities = 57/90 (63%), Positives = 72/90 (80%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +E+ I+PSE TMVSLLNACA LGA+ QGEW++N+L  N    ELN IV+TA+++MYCKCG
Sbjct: 245 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN--CFELNTIVVTAIIDMYCKCG 302

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
             + A +VF+T PKKGLSCWNSM+ GLA N
Sbjct: 303 CPERALQVFNTVPKKGLSCWNSMVFGLAMN 332


>ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
           gi|557539373|gb|ESR50417.1| hypothetical protein
           CICLE_v10031197mg [Citrus clementina]
          Length = 534

 Score =  122 bits (306), Expect = 5e-26
 Identities = 57/90 (63%), Positives = 72/90 (80%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +E+ I+PSE TMVSLLNACA LGA+ QGEW++N+L  N    ELN IV+TA+++MYCKCG
Sbjct: 245 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN--CFELNTIVVTAIIDMYCKCG 302

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
             + A +VF+T PKKGLSCWNSM+ GLA N
Sbjct: 303 CPERALQVFNTVPKKGLSCWNSMVFGLAMN 332


>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222856190|gb|EEE93737.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 509

 Score =  120 bits (302), Expect = 1e-25
 Identities = 57/88 (64%), Positives = 73/88 (82%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +EEGI+PSE TMVSLLNACA LGAL QGEW+++Y+  N+ +  LN IVITA+++MY KCG
Sbjct: 221 QEEGIKPSEFTMVSLLNACACLGALRQGEWIHDYIVKNNFA--LNSIVITAIIDMYSKCG 278

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLA 266
            +  A +VF ++PKKGLSCWNS+ILGLA
Sbjct: 279 SIDKALQVFKSAPKKGLSCWNSLILGLA 306


>ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum tuberosum]
          Length = 522

 Score =  117 bits (294), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 69/90 (76%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +EE I+PSE T+VSLLNAC HLGALEQG W+Y Y+  N+   ELN IV+TA+++MYCKCG
Sbjct: 244 QEENIKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKNN--VELNVIVVTAIIDMYCKCG 301

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
            V+ A  VF +   KGLS WNSMILGLA N
Sbjct: 302 NVEMAWHVFISISNKGLSSWNSMILGLATN 331


>ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Capsella rubella]
           gi|565472276|ref|XP_006293940.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
           gi|482562647|gb|EOA26837.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
           gi|482562648|gb|EOA26838.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
          Length = 555

 Score =  117 bits (294), Expect = 1e-24
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +E  ++P   TMVSLLNACA+LGA EQG W++ Y+  N    ELN IVITA++ MYCKCG
Sbjct: 245 QERNVKPDGFTMVSLLNACAYLGANEQGRWIHEYIARNR--FELNSIVITALIEMYCKCG 302

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
            ++   KVF+ +PKK LSCWNSMILGLANN
Sbjct: 303 CIEEGLKVFECAPKKQLSCWNSMILGLANN 332


>gb|ESW13851.1| hypothetical protein PHAVU_008G231600g [Phaseolus vulgaris]
          Length = 525

 Score =  117 bits (293), Expect = 2e-24
 Identities = 53/90 (58%), Positives = 72/90 (80%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +EEG+ PSE TMVSLL+ACAHLGAL+ GEWV++Y+     + +LN IV+TA+++MYCKCG
Sbjct: 246 QEEGVEPSEFTMVSLLSACAHLGALQHGEWVHDYI--KRGNFKLNVIVLTAIIDMYCKCG 303

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
            ++ A +VF  SP +GL CWNS+I+GLA N
Sbjct: 304 SIEKAVEVFAASPTRGLPCWNSIIIGLALN 333


>ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum lycopersicum]
          Length = 522

 Score =  117 bits (293), Expect = 2e-24
 Identities = 56/90 (62%), Positives = 69/90 (76%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +EE ++PSE T+VSLLNAC HLGALEQG W+Y Y+  N+   ELN IV+TA+++MYCKC 
Sbjct: 244 QEENVKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKNN--VELNVIVVTAIIDMYCKCA 301

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
            V+ A  VF +S  KGLS WNSMILGLA N
Sbjct: 302 NVEMAWHVFVSSSNKGLSSWNSMILGLATN 331


>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 550

 Score =  116 bits (291), Expect = 3e-24
 Identities = 52/90 (57%), Positives = 71/90 (78%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +++ I+PSE TMVSLLNA A LGA+ QGEW++ Y+  NH   +LNPIV+TA++NMY KCG
Sbjct: 245 QKQKIKPSEFTMVSLLNASAQLGAIRQGEWIHEYIRKNH--IQLNPIVVTAIINMYSKCG 302

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
            ++ A  VF+ +P+ GLSCWNS+I+GLA N
Sbjct: 303 SIEKAVHVFEAAPRTGLSCWNSIIMGLATN 332


>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Glycine max]
          Length = 534

 Score =  116 bits (290), Expect = 4e-24
 Identities = 54/88 (61%), Positives = 70/88 (79%)
 Frame = +3

Query: 9   EGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCGEV 188
           E + PSE TMVSLL+ACAHLGAL+ GEWV++Y+   H   ELN IV+TA+++MYCKCG +
Sbjct: 250 ERVEPSEFTMVSLLSACAHLGALKHGEWVHDYVKRGH--FELNVIVLTAIIDMYCKCGVI 307

Query: 189 KGARKVFDTSPKKGLSCWNSMILGLANN 272
             A +VF+ SP +GLSCWNS+I+GLA N
Sbjct: 308 VKAIEVFEASPTRGLSCWNSIIIGLALN 335


>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  116 bits (290), Expect = 4e-24
 Identities = 54/88 (61%), Positives = 69/88 (78%)
 Frame = +3

Query: 9   EGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCGEV 188
           E I PSE TMVSLLNACA LGA+ QGEW+++Y+       ELNPIV+TA+++MY KCG +
Sbjct: 248 ERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKK--KFELNPIVVTAIIDMYSKCGSI 305

Query: 189 KGARKVFDTSPKKGLSCWNSMILGLANN 272
             A +VF ++P++GLSCWNSMILGLA N
Sbjct: 306 DKAVQVFQSAPRRGLSCWNSMILGLAMN 333


>ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g42920, chloroplastic; Flags: Precursor
           gi|4512663|gb|AAD21717.1| hypothetical protein
           [Arabidopsis thaliana] gi|20197867|gb|AAM15291.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|110738441|dbj|BAF01146.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255093|gb|AEC10187.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 559

 Score =  115 bits (289), Expect = 5e-24
 Identities = 53/90 (58%), Positives = 69/90 (76%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +E+ ++P   TMVSLLNACA+LGA EQG W++ Y+  N    ELN IV+TA+++MYCKCG
Sbjct: 250 QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNR--FELNSIVVTALIDMYCKCG 307

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
            ++    VF+ +PKK LSCWNSMILGLANN
Sbjct: 308 CIEEGLNVFECAPKKQLSCWNSMILGLANN 337


>gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis]
           gi|587904202|gb|EXB92403.1| hypothetical protein
           L484_021387 [Morus notabilis]
          Length = 530

 Score =  115 bits (288), Expect = 6e-24
 Identities = 54/88 (61%), Positives = 66/88 (75%)
 Frame = +3

Query: 9   EGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCGEV 188
           EGI+ SE TMVSLLNA   LGA+ QGEW++ Y+  N    ELN IV+TA+++MYCKCG V
Sbjct: 252 EGIKASEFTMVSLLNASGRLGAIRQGEWIHEYITKN--GIELNVIVVTAIIDMYCKCGSV 309

Query: 189 KGARKVFDTSPKKGLSCWNSMILGLANN 272
             A  VF T+PK GLSCWNSM++GLA N
Sbjct: 310 NKALSVFKTAPKLGLSCWNSMVMGLAMN 337


>ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutrema salsugineum]
           gi|557112734|gb|ESQ53018.1| hypothetical protein
           EUTSA_v10017572mg [Eutrema salsugineum]
          Length = 546

 Score =  115 bits (288), Expect = 6e-24
 Identities = 52/90 (57%), Positives = 69/90 (76%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +E  ++P   TMVSLLNACA+LGA EQG W++ Y+  N    ELN IVITA+++MYCKCG
Sbjct: 249 QERNVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVKNR--FELNSIVITALIDMYCKCG 306

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
            ++   +VF+++P K LSCWNSM+LGLANN
Sbjct: 307 CIEEGLRVFESAPNKQLSCWNSMVLGLANN 336


>ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325851|gb|EFH56271.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 542

 Score =  114 bits (284), Expect = 2e-23
 Identities = 54/90 (60%), Positives = 67/90 (74%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +E  ++P   TMVSLLNACA+LGA EQG W++ Y+  N    ELN IVITA+++MYCKCG
Sbjct: 250 QERDVKPDGFTMVSLLNACAYLGASEQGRWIHKYIVRNR--FELNSIVITALIDMYCKCG 307

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
             +   KVF+ +P K LSCWNSMILGLANN
Sbjct: 308 CFEEGLKVFECAPTKQLSCWNSMILGLANN 337


>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Vitis vinifera]
           gi|302143555|emb|CBI22116.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score =  109 bits (273), Expect = 3e-22
 Identities = 53/90 (58%), Positives = 70/90 (77%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +EE I+PSE TMVSLLNA A LGAL+QGEW+++Y+  N+   ELN IV  ++++MYCKCG
Sbjct: 249 QEERIKPSEFTMVSLLNASARLGALKQGEWIHDYIRKNN--FELNVIVTASIIDMYCKCG 306

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
            +  A +VF+ +P KGLS WN+MILGLA N
Sbjct: 307 SIGEAFQVFEMAPLKGLSSWNTMILGLAMN 336


>ref|XP_004250818.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum lycopersicum]
          Length = 199

 Score =  104 bits (260), Expect = 1e-20
 Identities = 49/90 (54%), Positives = 64/90 (71%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +EE  +PSE T+VSLLNAC HLGAL++G W+Y Y+  N+   ELN I++TA+++MYC CG
Sbjct: 2   KEENTKPSEFTLVSLLNACGHLGALDKGNWIYMYVKKNN--VELNVIIVTAIIDMYCNCG 59

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
               A  VF +   +GLS WNSMILGL  N
Sbjct: 60  NFDMASHVFVSLSNEGLSSWNSMILGLDTN 89


>ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
           gi|449530724|ref|XP_004172343.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
          Length = 543

 Score =  104 bits (259), Expect = 1e-20
 Identities = 50/90 (55%), Positives = 66/90 (73%)
 Frame = +3

Query: 3   REEGIRPSEHTMVSLLNACAHLGALEQGEWVYNYLCNNHDSSELNPIVITAVVNMYCKCG 182
           +EE I+PSE TMVSLLNA A +GAL QG W++ Y+  N+   +LN IV+TA+++MYCKCG
Sbjct: 248 QEERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKNN--LQLNAIVVTAIIDMYCKCG 305

Query: 183 EVKGARKVFDTSPKKGLSCWNSMILGLANN 272
            +  A +VF+  P + LS WNSMI GLA N
Sbjct: 306 SIGNALQVFEKIPCRSLSSWNSMIFGLAVN 335