BLASTX nr result
ID: Rheum21_contig00031998
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00031998 (320 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002608372.1| orf333 [Vitis vinifera] gi|209954169|emb|CAQ... 86 7e-30 emb|CAN61459.1| hypothetical protein VITISV_029798 [Vitis vinifera] 110 2e-22 emb|CAP16621.1| polyprotein [Musa acuminata subsp. malaccensis] 98 1e-18 emb|CAP16620.1| polyprotein [Musa acuminata subsp. malaccensis] 97 3e-18 ref|XP_004252075.1| PREDICTED: uncharacterized protein LOC101245... 96 5e-18 emb|CAN76063.1| hypothetical protein VITISV_040632 [Vitis vinifera] 95 8e-18 emb|CAN71787.1| hypothetical protein VITISV_031913 [Vitis vinifera] 95 1e-17 emb|CAN69702.1| hypothetical protein VITISV_020318 [Vitis vinifera] 94 2e-17 emb|CAN73574.1| hypothetical protein VITISV_008296 [Vitis vinifera] 93 3e-17 emb|CAD12894.1| reverse transcriptase, partial [Brassica napus] 92 7e-17 ref|XP_004243118.1| PREDICTED: uncharacterized protein LOC101244... 91 2e-16 emb|CAN75210.1| hypothetical protein VITISV_005867 [Vitis vinifera] 83 4e-14 gb|ABA91307.1| retrotransposon protein, putative, Ty3-gypsy subc... 82 6e-14 gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subc... 82 7e-14 gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subc... 82 7e-14 gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subc... 82 7e-14 emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group] 82 7e-14 emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group] 82 7e-14 gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subc... 82 9e-14 gb|ABC94893.1| polyprotein [Oryza australiensis] 82 9e-14 >ref|YP_002608372.1| orf333 [Vitis vinifera] gi|209954169|emb|CAQ77616.1| orf333 [Vitis vinifera] gi|239764769|gb|ACS15238.1| ORF333 [Vitis vinifera] Length = 221 Score = 85.5 bits (210), Expect(2) = 7e-30 Identities = 40/42 (95%), Positives = 41/42 (97%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLD 194 RYGAYEF+VM FGLTNAPATFCTLMNQVVRDYLENFVVVYLD Sbjct: 140 RYGAYEFLVMPFGLTNAPATFCTLMNQVVRDYLENFVVVYLD 181 Score = 70.9 bits (172), Expect(2) = 7e-30 Identities = 35/42 (83%), Positives = 37/42 (88%) Frame = -1 Query: 203 LSRLVIYSSSLEEHSVHLRKVFTRLREHELYVVEMLF*SNKD 78 L +VIYSSS EEHSVHLRKVFTRLREHELYVVEMLF N+D Sbjct: 180 LDDIVIYSSSFEEHSVHLRKVFTRLREHELYVVEMLFCLNED 221 >emb|CAN61459.1| hypothetical protein VITISV_029798 [Vitis vinifera] Length = 169 Score = 110 bits (274), Expect = 2e-22 Identities = 64/109 (58%), Positives = 73/109 (66%), Gaps = 4/109 (3%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLDLSFTALVWKSIQCI*ERC 140 RYGAYEF+VM FGLTNAPATFCTLMNQVVRDYLENFVVVYLD +++ S Sbjct: 62 RYGAYEFLVMPFGLTNAPATFCTLMNQVVRDYLENFVVVYLD---DIVIYSS-------- 110 Query: 139 LPGCGNTNCMSSKCSFDQTK----MKFLGHVIEHGRIRMDPAKVQAIQE 5 + + + F + + LGHVIEHGRIRMDPAKVQAIQE Sbjct: 111 ---SFEEHSVHLRKVFTRLREHELYVLLGHVIEHGRIRMDPAKVQAIQE 156 >emb|CAP16621.1| polyprotein [Musa acuminata subsp. malaccensis] Length = 365 Score = 97.8 bits (242), Expect = 1e-18 Identities = 55/110 (50%), Positives = 75/110 (68%), Gaps = 5/110 (4%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLD--LSFTALVWKSIQCI*E 146 RYGA+EF+VM FGLTNAPATFCTLMNQ+ ++YL+ FVVVYLD + ++ + + ++ + Sbjct: 67 RYGAFEFLVMPFGLTNAPATFCTLMNQLFKEYLDKFVVVYLDDIVVYSQTLEEHVKHL-- 124 Query: 145 RCLPGCGNTNCM---SSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 R + N + KC F QT++ FLGH I G IRMD +KVQA+ E Sbjct: 125 RTIFKVLRENTLFVKREKCYFAQTEILFLGHRIGDGSIRMDKSKVQAVAE 174 >emb|CAP16620.1| polyprotein [Musa acuminata subsp. malaccensis] Length = 365 Score = 96.7 bits (239), Expect = 3e-18 Identities = 54/110 (49%), Positives = 75/110 (68%), Gaps = 5/110 (4%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLD--LSFTALVWKSIQCI*E 146 RYGA+EF+V+ FGLTNAPATFCTLMNQ+ ++YL+ FVVVYLD + ++ + + ++ + Sbjct: 67 RYGAFEFLVLPFGLTNAPATFCTLMNQLFKEYLDKFVVVYLDDIVVYSQTLEEHVKHL-- 124 Query: 145 RCLPGCGNTNCM---SSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 R + N + KC F QT++ FLGH I G IRMD +KVQA+ E Sbjct: 125 RTIFKVLRENTLFVKREKCYFAQTEILFLGHRIGDGSIRMDKSKVQAVAE 174 >ref|XP_004252075.1| PREDICTED: uncharacterized protein LOC101245034 [Solanum lycopersicum] Length = 3347 Score = 95.9 bits (237), Expect = 5e-18 Identities = 52/106 (49%), Positives = 71/106 (66%), Gaps = 3/106 (2%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLD--LSFTALVWKSIQCI*E 146 RYG+YEF+VM FGLTNAPATFC LMN V+ DYL++FVVVYLD + ++ + + + + Sbjct: 1075 RYGSYEFLVMPFGLTNAPATFCNLMNNVLFDYLDDFVVVYLDDIVIYSRTLEEHVNHLSL 1134 Query: 145 RCLPGCGNTNCMS-SKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAI 11 T + KC F Q ++KFLGH++ ++RMDP KVQAI Sbjct: 1135 NLSQLRKYTLYVKMEKCEFAQQEIKFLGHLVSKNQVRMDPKKVQAI 1180 >emb|CAN76063.1| hypothetical protein VITISV_040632 [Vitis vinifera] Length = 1453 Score = 95.1 bits (235), Expect = 8e-18 Identities = 55/110 (50%), Positives = 69/110 (62%), Gaps = 5/110 (4%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLD--LSFTALVW---KSIQC 155 RYG+YEF+VM FGLTNAPATFC LMN V+ DYL+ FVVVYLD + ++ + K ++ Sbjct: 681 RYGSYEFLVMPFGLTNAPATFCNLMNDVLFDYLDXFVVVYLDDIVVYSKTLTEHEKHLRL 740 Query: 154 I*ERCLPGCGNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 + +R KC F Q ++ FLGH I G IRMD KVQAI E Sbjct: 741 VFQRLRE--NRLYVKPEKCEFAQEEITFLGHKISAGLIRMDKGKVQAIME 788 >emb|CAN71787.1| hypothetical protein VITISV_031913 [Vitis vinifera] Length = 1667 Score = 94.7 bits (234), Expect = 1e-17 Identities = 55/110 (50%), Positives = 69/110 (62%), Gaps = 5/110 (4%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLD--LSFTALVW---KSIQC 155 RYG+YEF+VM FGLTNAPATFC LMN V+ DYL+ FVVVYLD + ++ + K ++ Sbjct: 656 RYGSYEFLVMPFGLTNAPATFCNLMNDVLFDYLDAFVVVYLDDIVVYSKTLTEHEKHLRL 715 Query: 154 I*ERCLPGCGNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 + +R KC F Q ++ FLGH I G IRMD KVQAI E Sbjct: 716 VFQRLRE--NRLYVKPEKCEFAQEEITFLGHKISAGLIRMDKGKVQAIME 763 >emb|CAN69702.1| hypothetical protein VITISV_020318 [Vitis vinifera] Length = 1454 Score = 94.0 bits (232), Expect = 2e-17 Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 3/108 (2%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLD---LSFTALVWKSIQCI* 149 RYG+YEF+VM FGLTNAPATFCTLMN++ YL+ FVVVYLD + L + + I Sbjct: 666 RYGSYEFLVMSFGLTNAPATFCTLMNKIFHPYLDKFVVVYLDDIVIYSNTLKEHAERAIR 725 Query: 148 ERCLPGCGNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 E+ KC F + ++ FLGH I G++ MD +KV+AIQE Sbjct: 726 EK------------EKCLFAKEEVSFLGHRIRDGKLMMDDSKVKAIQE 761 >emb|CAN73574.1| hypothetical protein VITISV_008296 [Vitis vinifera] Length = 1027 Score = 93.2 bits (230), Expect = 3e-17 Identities = 56/111 (50%), Positives = 65/111 (58%), Gaps = 6/111 (5%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLDLSFTALVWKSIQCI*ERC 140 RYG+YEF+VM FGLTNAPATFC LMN V+ DYL+ FVVVYLD +V+ E+ Sbjct: 212 RYGSYEFLVMPFGLTNAPATFCNLMNDVLFDYLDAFVVVYLD---DIVVYSKTLTEHEKH 268 Query: 139 LPGC------GNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 L KC F Q ++ FLGH I G IRMD KVQAI E Sbjct: 269 LRLXFXRLRENRLYVKPEKCEFAQEEITFLGHKISAGLIRMDKGKVQAIME 319 >emb|CAD12894.1| reverse transcriptase, partial [Brassica napus] Length = 296 Score = 92.0 bits (227), Expect = 7e-17 Identities = 50/109 (45%), Positives = 74/109 (67%), Gaps = 4/109 (3%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLD--LSFTALVWKSIQCI*E 146 RYG++E++VM FGLTNAPATFCTLMNQ+++ YL+ FVV YLD + ++ + + ++ + Sbjct: 63 RYGSFEWLVMPFGLTNAPATFCTLMNQILQPYLDRFVVAYLDDIVIYSNSMEEHVEHLQT 122 Query: 145 --RCLPGCGNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 R L KC+F +++FLGHVI HG+++MD KV+AI E Sbjct: 123 VFRVLRE-NELFVKREKCTFATEEVQFLGHVIGHGKLKMDEPKVKAIME 170 >ref|XP_004243118.1| PREDICTED: uncharacterized protein LOC101244681 [Solanum lycopersicum] Length = 1368 Score = 90.9 bits (224), Expect = 2e-16 Identities = 51/115 (44%), Positives = 67/115 (58%), Gaps = 12/115 (10%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLD------------LSFTAL 176 RYG+YEF+VM FGLTNAP TFC LMN V+ DYL++FVVVYLD ++ +L Sbjct: 908 RYGSYEFLVMPFGLTNAPETFCNLMNNVLFDYLDDFVVVYLDDIVIYSRTLEEHVNHLSL 967 Query: 175 VWKSIQCI*ERCLPGCGNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAI 11 V ++ KC F ++KFLGH++ ++RMDP KVQAI Sbjct: 968 VLSQLRKY---------MRYVKMEKCEFAIQEIKFLGHLVSKNQVRMDPKKVQAI 1013 >emb|CAN75210.1| hypothetical protein VITISV_005867 [Vitis vinifera] Length = 1137 Score = 82.8 bits (203), Expect = 4e-14 Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 6/105 (5%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLDLSFTALVWKSIQCI*ERC 140 RYG+YEF+VM FGLTNAPATFCTLMN++ YL+ FVVVYLD +++ + E Sbjct: 657 RYGSYEFLVMSFGLTNAPATFCTLMNKIFHPYLDKFVVVYLD---DIVIYSNTLKEHEEH 713 Query: 139 LPGC------GNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAK 23 L KCSF + ++ FLGH I G++ MD ++ Sbjct: 714 LRKVFKILRQNKLYVKKEKCSFAKEEVSFLGHRIRDGKLMMDDSQ 758 >gb|ABA91307.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1284 Score = 82.4 bits (202), Expect = 6e-14 Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 8/113 (7%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLDLSFTALVW--------KS 164 RYG YEF VM FGLTNAPA F LMN+V DYL+ FVVV++D L++ + Sbjct: 655 RYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFID---DILIYSKDEEEHAEH 711 Query: 163 IQCI*ERCLPGCGNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 ++ + ++ SKC F ++ FLGHVI G + +DPAKV+A+ E Sbjct: 712 LRLVLQKLRK--HKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVME 762 >gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1470 Score = 82.0 bits (201), Expect = 7e-14 Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 8/113 (7%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLDLSFTALVW--------KS 164 RYG YEF VM FGLTNAPA F LMN+V DYL+ FVVV++D L++ + Sbjct: 655 RYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFID---DILIYSKDEEEHAEH 711 Query: 163 IQCI*ERCLPGCGNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 ++ + ++ SKC F ++ FLGHVI G + +DPAKV+A+ E Sbjct: 712 LRLVLQKLRK--HKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTE 762 >gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1710 Score = 82.0 bits (201), Expect = 7e-14 Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 8/113 (7%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLDLSFTALVW--------KS 164 RYG YEF VM FGLTNAPA F LMN+V DYL+ FVVV++D L++ + Sbjct: 1018 RYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFID---DILIYSKDEEEHAEH 1074 Query: 163 IQCI*ERCLPGCGNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 ++ + ++ SKC F ++ FLGHVI G + +DPAKV+A+ E Sbjct: 1075 LRLVLQKLRK--HKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTE 1125 >gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1470 Score = 82.0 bits (201), Expect = 7e-14 Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 8/113 (7%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLDLSFTALVW--------KS 164 RYG YEF VM FGLTNAPA F LMN+V DYL+ FVVV++D L++ + Sbjct: 655 RYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFID---DILIYSKDEEEHAEH 711 Query: 163 IQCI*ERCLPGCGNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 ++ + ++ SKC F ++ FLGHVI G + +DPAKV+A+ E Sbjct: 712 LRLVLQKLRK--HKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTE 762 >emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group] Length = 1470 Score = 82.0 bits (201), Expect = 7e-14 Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 8/113 (7%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLDLSFTALVW--------KS 164 RYG YEF VM FGLTNAPA F LMN+V DYL+ FVVV++D L++ + Sbjct: 655 RYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFID---DILIYSKDEEEHAEH 711 Query: 163 IQCI*ERCLPGCGNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 ++ + ++ SKC F ++ FLGHVI G + +DPAKV+A+ E Sbjct: 712 LRLVLQKLRK--HKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTE 762 >emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group] Length = 1470 Score = 82.0 bits (201), Expect = 7e-14 Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 8/113 (7%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLDLSFTALVW--------KS 164 RYG YEF VM FGLTNAPA F LMN+V DYL+ FVVV++D L++ + Sbjct: 655 RYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFID---DILIYSKDEEEHAEH 711 Query: 163 IQCI*ERCLPGCGNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 ++ + ++ SKC F ++ FLGHVI G + +DPAKV+A+ E Sbjct: 712 LRLVLQKLRK--HKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTE 762 >gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1226 Score = 81.6 bits (200), Expect = 9e-14 Identities = 48/111 (43%), Positives = 65/111 (58%), Gaps = 8/111 (7%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLDLSFTALVW--------KS 164 RYG YEF VM FGLTNAPA F LMN+V DYL+ FVVV++D L++ + Sbjct: 504 RYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFID---DILIYSKDEEEHVEH 560 Query: 163 IQCI*ERCLPGCGNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAI 11 ++ + E+ SKC F ++ FLGHVI G + +DPAKV+A+ Sbjct: 561 LRLVLEKLRK--HKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAV 609 >gb|ABC94893.1| polyprotein [Oryza australiensis] Length = 1469 Score = 81.6 bits (200), Expect = 9e-14 Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 8/113 (7%) Frame = -2 Query: 319 RYGAYEFVVMLFGLTNAPATFCTLMNQVVRDYLENFVVVYLDLSFTALVW--------KS 164 RYG YEF VM FGLTNAPA F LMN+V +YL+ FVVV++D L++ + Sbjct: 654 RYGLYEFTVMSFGLTNAPAYFMNLMNKVFMEYLDKFVVVFID---DILIYSKNDEEHAEH 710 Query: 163 IQCI*ERCLPGCGNTNCMSSKCSFDQTKMKFLGHVIEHGRIRMDPAKVQAIQE 5 ++ + E+ SKC F ++ FLGHV+ G + +DPAKV+A+ E Sbjct: 711 LRLVLEKLRE--HRLYAKFSKCEFWLKEVAFLGHVVSAGGVAVDPAKVEAVME 761