BLASTX nr result
ID: Rheum21_contig00031894
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00031894
(515 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004232626.1| PREDICTED: pentatricopeptide repeat-containi... 112 4e-23
gb|EMJ12567.1| hypothetical protein PRUPE_ppa002507mg [Prunus pe... 110 1e-22
ref|XP_006363176.1| PREDICTED: pentatricopeptide repeat-containi... 108 6e-22
ref|XP_004295517.1| PREDICTED: pentatricopeptide repeat-containi... 108 7e-22
ref|XP_002304600.2| hypothetical protein POPTR_0003s15360g [Popu... 107 2e-21
ref|XP_002297917.1| hypothetical protein POPTR_0001s12190g [Popu... 106 3e-21
ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_006468575.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_006448599.1| hypothetical protein CICLE_v10014519mg [Citr... 100 3e-19
emb|CBI27232.3| unnamed protein product [Vitis vinifera] 99 4e-19
gb|ESW10855.1| hypothetical protein PHAVU_009G243700g [Phaseolus... 99 8e-19
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,... 97 2e-18
ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata] g... 97 3e-18
ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
ref|XP_006283284.1| hypothetical protein CARUB_v10004320mg [Caps... 92 7e-17
ref|NP_193742.1| pentatricopeptide repeat-containing protein [Ar... 92 9e-17
ref|XP_006404148.1| hypothetical protein EUTSA_v10010168mg [Eutr... 91 1e-16
gb|EXB83265.1| hypothetical protein L484_011559 [Morus notabilis] 84 2e-14
ref|XP_006855880.1| hypothetical protein AMTR_s00037p00138240 [A... 81 1e-13
gb|EOX96827.1| Pentatricopeptide repeat (PPR) superfamily protei... 81 1e-13
>ref|XP_004232626.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Solanum lycopersicum]
Length = 717
Score = 112 bits (281), Expect = 4e-23
Identities = 59/84 (70%), Positives = 66/84 (78%)
Frame = +1
Query: 259 ETDPEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKREKRVFR 438
ET+ E ISD+ FK PKLGS+K GDSTFY+LIEK A+ DF S+EK+FGRMK EKRVF
Sbjct: 113 ETEVEVPISDKLFKEAPKLGSFKLGDSTFYSLIEKYANSEDFTSLEKVFGRMKCEKRVFI 172
Query: 439 EKSFIFVFRAYGKAHLPELAAGLF 510
EKSFI VFRAYGKA LPE A LF
Sbjct: 173 EKSFILVFRAYGKARLPEKAVELF 196
>gb|EMJ12567.1| hypothetical protein PRUPE_ppa002507mg [Prunus persica]
Length = 664
Score = 110 bits (276), Expect = 1e-22
Identities = 56/94 (59%), Positives = 69/94 (73%)
Frame = +1
Query: 229 NKACESEDEIETDPEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFG 408
N+A ++E + EP IS+E FK G KLGSYK GDSTFY+LIE A+ DF S+E++
Sbjct: 50 NQALQTEPVNNDETEPPISNEIFKKGTKLGSYKSGDSTFYSLIENYANLGDFRSLEQVLD 109
Query: 409 RMKREKRVFREKSFIFVFRAYGKAHLPELAAGLF 510
RMKRE+RVF E+SFI +FRAYGKAHLP A LF
Sbjct: 110 RMKRERRVFIEQSFILMFRAYGKAHLPNKAVELF 143
>ref|XP_006363176.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like isoform X1 [Solanum tuberosum]
gi|565395083|ref|XP_006363177.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X2 [Solanum tuberosum]
Length = 717
Score = 108 bits (271), Expect = 6e-22
Identities = 57/84 (67%), Positives = 65/84 (77%)
Frame = +1
Query: 259 ETDPEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKREKRVFR 438
+T+ E ISD+ FK PKLGS+K GDSTFY+LIEK A+ DF S+EK+F RMK EKRVF
Sbjct: 113 KTEVEVPISDKLFKEAPKLGSFKLGDSTFYSLIEKYANSGDFTSLEKVFDRMKCEKRVFI 172
Query: 439 EKSFIFVFRAYGKAHLPELAAGLF 510
EKSFI VFRAYGKA LPE A LF
Sbjct: 173 EKSFILVFRAYGKARLPEKAVELF 196
>ref|XP_004295517.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Fragaria vesca subsp. vesca]
Length = 647
Score = 108 bits (270), Expect = 7e-22
Identities = 52/82 (63%), Positives = 62/82 (75%)
Frame = +1
Query: 265 DPEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKREKRVFREK 444
+P+P IS+E F+ GP G+YK GDSTFY+LIE A DFGS+EK+ RMKRE+RVF E
Sbjct: 43 EPDPPISEEIFRKGPNFGAYKSGDSTFYSLIENYASLGDFGSLEKVLDRMKRERRVFVEG 102
Query: 445 SFIFVFRAYGKAHLPELAAGLF 510
SFI VFRA+GKAHLP A LF
Sbjct: 103 SFIAVFRAFGKAHLPNQAVDLF 124
>ref|XP_002304600.2| hypothetical protein POPTR_0003s15360g [Populus trichocarpa]
gi|550343237|gb|EEE79579.2| hypothetical protein
POPTR_0003s15360g [Populus trichocarpa]
Length = 672
Score = 107 bits (267), Expect = 2e-21
Identities = 55/92 (59%), Positives = 67/92 (72%)
Frame = +1
Query: 235 ACESEDEIETDPEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRM 414
A + E IE DP ISD+ FK GPK+GSYK GDSTFY+LI+ A+ DF S+EK+ RM
Sbjct: 60 ASDREHGIEHDPP--ISDKIFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRM 117
Query: 415 KREKRVFREKSFIFVFRAYGKAHLPELAAGLF 510
+ EKRV EK F+ +F+AYGKAHLPE A GLF
Sbjct: 118 RCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLF 149
>ref|XP_002297917.1| hypothetical protein POPTR_0001s12190g [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| hypothetical protein
POPTR_0001s12190g [Populus trichocarpa]
Length = 670
Score = 106 bits (265), Expect = 3e-21
Identities = 52/89 (58%), Positives = 65/89 (73%)
Frame = +1
Query: 244 SEDEIETDPEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKRE 423
++ E +P+P ISD+ FK GPK+GSY+ GDSTFY+LI A+ DF S+EK+ RMK E
Sbjct: 60 TDQENGIEPDPPISDKIFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCE 119
Query: 424 KRVFREKSFIFVFRAYGKAHLPELAAGLF 510
KRV EK FI +F+AYGKAHLPE A LF
Sbjct: 120 KRVIFEKCFIVIFKAYGKAHLPEKAVDLF 148
>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 103 bits (257), Expect = 2e-20
Identities = 50/78 (64%), Positives = 61/78 (78%)
Frame = +1
Query: 280 ISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKREKRVFREKSFIFV 459
I D+ FK ++GSYK GDSTFY+LIE A+ DFG++ ++F RMKRE+RVF EK+FI V
Sbjct: 46 IPDQIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILV 105
Query: 460 FRAYGKAHLPELAAGLFG 513
FRAYGKAHLPE A LFG
Sbjct: 106 FRAYGKAHLPEKAIELFG 123
>ref|XP_006468575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Citrus sinensis]
Length = 664
Score = 100 bits (250), Expect = 2e-19
Identities = 53/94 (56%), Positives = 64/94 (68%)
Frame = +1
Query: 229 NKACESEDEIETDPEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFG 408
NK E+E + E SDE F PKLGSY+ GDSTFY+LI+ A+ DF S+E +
Sbjct: 48 NKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLY 107
Query: 409 RMKREKRVFREKSFIFVFRAYGKAHLPELAAGLF 510
RM+REKRV EKSFIF+F+AYGKAHL E A LF
Sbjct: 108 RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
>ref|XP_006448599.1| hypothetical protein CICLE_v10014519mg [Citrus clementina]
gi|557551210|gb|ESR61839.1| hypothetical protein
CICLE_v10014519mg [Citrus clementina]
Length = 664
Score = 100 bits (248), Expect = 3e-19
Identities = 53/94 (56%), Positives = 64/94 (68%)
Frame = +1
Query: 229 NKACESEDEIETDPEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFG 408
NK E+E + E SDE F PKLGSY+ GDSTFY+LI+ A+ DF S+E +
Sbjct: 48 NKHMETEPQGNAKSEQPFSDEVFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLC 107
Query: 409 RMKREKRVFREKSFIFVFRAYGKAHLPELAAGLF 510
RM+REKRV EKSFIF+F+AYGKAHL E A LF
Sbjct: 108 RMRREKRVALEKSFIFIFKAYGKAHLVEEAVRLF 141
>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 99.4 bits (246), Expect = 4e-19
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = +1
Query: 295 FKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKREKRVFREKSFIFVFRAYG 474
FK ++GSYK GDSTFY+LIE A+ DFG++ ++F RMKRE+RVF EK+FI VFRAYG
Sbjct: 67 FKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYG 126
Query: 475 KAHLPELAAGLFG 513
KAHLPE A LFG
Sbjct: 127 KAHLPEKAIELFG 139
>gb|ESW10855.1| hypothetical protein PHAVU_009G243700g [Phaseolus vulgaris]
Length = 645
Score = 98.6 bits (244), Expect = 8e-19
Identities = 47/81 (58%), Positives = 61/81 (75%)
Frame = +1
Query: 268 PEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKREKRVFREKS 447
P+P S E FK G K+GSYK GD +FY+LI+ A DFGS+E++ +MKRE+RVF E++
Sbjct: 42 PQPHPSAEIFKSGTKMGSYKLGDLSFYSLIQNHASTLDFGSLEEVLQQMKRERRVFVERN 101
Query: 448 FIFVFRAYGKAHLPELAAGLF 510
FI +F+AYGKAHLPE A LF
Sbjct: 102 FIVMFKAYGKAHLPEKAVDLF 122
>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 653
Score = 97.4 bits (241), Expect = 2e-18
Identities = 51/94 (54%), Positives = 62/94 (65%)
Frame = +1
Query: 229 NKACESEDEIETDPEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFG 408
N E+ E E+ P ISD+ F PK+GS+K GDSTFY+LIE A DF S+EK+
Sbjct: 40 NNDLENGSEPESSP---ISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLN 96
Query: 409 RMKREKRVFREKSFIFVFRAYGKAHLPELAAGLF 510
RM+ E RVF EKSF +F+AYGKAHLP A LF
Sbjct: 97 RMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELF 130
>ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 96.7 bits (239), Expect = 3e-18
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = +1
Query: 253 EIETDPEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKREKRV 432
E+ET E IS++ FK PK+GS+K GDST ++IE A+ DF S+EK+ R++ E RV
Sbjct: 50 EVETPLEAPISEQMFKSAPKMGSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRV 109
Query: 433 FREKSFIFVFRAYGKAHLPELAAGLF 510
E+SFI VFRAYGKAHLPE A LF
Sbjct: 110 IIERSFIVVFRAYGKAHLPEKAVDLF 135
>ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like isoform X1 [Glycine max]
gi|571476386|ref|XP_006586943.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X2 [Glycine max]
gi|571476388|ref|XP_006586944.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X3 [Glycine max]
gi|571476390|ref|XP_006586945.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X4 [Glycine max]
gi|571476393|ref|XP_006586946.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X5 [Glycine max]
gi|571476395|ref|XP_006586947.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X6 [Glycine max]
Length = 642
Score = 94.4 bits (233), Expect = 1e-17
Identities = 46/80 (57%), Positives = 59/80 (73%)
Frame = +1
Query: 271 EPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKREKRVFREKSF 450
+P S E FK G ++GSYK GD +FY+LIE A DF S+E++ +MKRE+RVF EK+F
Sbjct: 40 KPHPSSEIFKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNF 99
Query: 451 IFVFRAYGKAHLPELAAGLF 510
I +F+AYGKAHLPE A LF
Sbjct: 100 IVMFKAYGKAHLPEKAVDLF 119
>ref|XP_006283284.1| hypothetical protein CARUB_v10004320mg [Capsella rubella]
gi|482551989|gb|EOA16182.1| hypothetical protein
CARUB_v10004320mg [Capsella rubella]
Length = 660
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/86 (53%), Positives = 57/86 (66%)
Frame = +1
Query: 253 EIETDPEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKREKRV 432
E+E E IS+ FK PK+GSYK GDST ++IE A+ DF S+E++ R++ E RV
Sbjct: 50 EVENPSEAPISENMFKSAPKMGSYKLGDSTLSSMIENYANSGDFASVEQVLSRVRLENRV 109
Query: 433 FREKSFIFVFRAYGKAHLPELAAGLF 510
E SFI VFRAYGKAHLP A LF
Sbjct: 110 ISEHSFIVVFRAYGKAHLPGKAVDLF 135
>ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated
salt-inducible-like protein [Arabidopsis thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated
salt-inducible-like protein [Arabidopsis thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025
[Arabidopsis thaliana] gi|332658871|gb|AEE84271.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 660
Score = 91.7 bits (226), Expect = 9e-17
Identities = 46/89 (51%), Positives = 61/89 (68%)
Frame = +1
Query: 244 SEDEIETDPEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKRE 423
S + +E E IS++ FK PK+GS+K GDST ++IE A+ DF S+EK+ R++ E
Sbjct: 47 SMEVVENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLE 106
Query: 424 KRVFREKSFIFVFRAYGKAHLPELAAGLF 510
RV E+SFI VFRAYGKAHLP+ A LF
Sbjct: 107 NRVIIERSFIVVFRAYGKAHLPDKAVDLF 135
>ref|XP_006404148.1| hypothetical protein EUTSA_v10010168mg [Eutrema salsugineum]
gi|557105267|gb|ESQ45601.1| hypothetical protein
EUTSA_v10010168mg [Eutrema salsugineum]
Length = 696
Score = 91.3 bits (225), Expect = 1e-16
Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Frame = +1
Query: 223 TPNKACESEDEIETDPEPL-ISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEK 399
+P + E+E + +P IS++ F+ PK+GSYK GDST ++IE A+ DF S+EK
Sbjct: 77 SPKPSMETEQQHTENPSAAPISEKMFESAPKMGSYKLGDSTLSSMIENYANSGDFASVEK 136
Query: 400 IFGRMKREKRVFREKSFIFVFRAYGKAHLPELAAGLF 510
+ R++ E R+ RE SFI +FRAYGKAHLPE LF
Sbjct: 137 LLSRIRLENRMIREHSFIVLFRAYGKAHLPEKTIELF 173
>gb|EXB83265.1| hypothetical protein L484_011559 [Morus notabilis]
Length = 699
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = +1
Query: 307 PKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKREKRVFREKSFIFVFRAYGKAHL 486
P GSYK GDSTFY+LI A DF S+EK+ R+K E+RV EK FI +FRAYGKAHL
Sbjct: 58 PDSGSYKLGDSTFYSLIHNYASSADFRSLEKVLDRIKSERRVLVEKCFIVIFRAYGKAHL 117
Query: 487 PELAAGLF 510
P A LF
Sbjct: 118 PNKAVDLF 125
>ref|XP_006855880.1| hypothetical protein AMTR_s00037p00138240 [Amborella trichopoda]
gi|548859701|gb|ERN17347.1| hypothetical protein
AMTR_s00037p00138240 [Amborella trichopoda]
Length = 649
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +1
Query: 259 ETDPEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKREKRVFR 438
E + EP +++E F+ P +G YK GDSTF++L++ AD DF + ++F RMKRE RVF
Sbjct: 47 EDEEEPPVAEEIFRGAPTMGPYKQGDSTFFSLVQTYADSGDFVLLNQVFTRMKRENRVFT 106
Query: 439 EKSFIFVFRAYGKAHLPELAAGLF 510
EK FI V +A+G+A E A +F
Sbjct: 107 EKLFILVIKAHGRAGSYESAIKVF 130
>gb|EOX96827.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 636
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/81 (50%), Positives = 53/81 (65%)
Frame = +1
Query: 268 PEPLISDEFFKLGPKLGSYKHGDSTFYTLIEKCADCCDFGSIEKIFGRMKREKRVFREKS 447
P PL SD+ F P+ GS++ GDST Y+LI A DF S+ + RMK + RVF EK
Sbjct: 34 PTPL-SDQLFNSAPQSGSFRLGDSTCYSLIHHYAHKVDFASLHDVLCRMKLQNRVFIEKY 92
Query: 448 FIFVFRAYGKAHLPELAAGLF 510
F+ +F+AYG+AHLPE A LF
Sbjct: 93 FLLIFKAYGRAHLPEKAVDLF 113