BLASTX nr result

ID: Rheum21_contig00031829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00031829
         (215 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     130   2e-28
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g...   130   2e-28
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|...   130   2e-28
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   129   3e-28
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  128   7e-28
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]     125   4e-27
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   125   6e-27
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc...   125   6e-27
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   125   6e-27
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]         125   6e-27
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         125   8e-27
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   125   8e-27
gb|ADB27475.1| gag-pol polyprotein [Cenchrus setaceus]                125   8e-27
dbj|BAH80072.1| putative unclassified retrotransposon protein [O...   125   8e-27
gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japoni...   125   8e-27
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]        125   8e-27
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]        125   8e-27
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]        125   8e-27
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  125   8e-27
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]                124   2e-26

>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  130 bits (326), Expect = 2e-28
 Identities = 57/71 (80%), Positives = 65/71 (91%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            LYAL+R L+TWQHYLWP+EFVIHSDH A+ YLK QA LNRRHA+WVEF+ETFPYVV +KK
Sbjct: 1060 LYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYVVKYKK 1119

Query: 183  GKENVVADALS 215
            GKEN+VADALS
Sbjct: 1120 GKENIVADALS 1130


>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
           gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
           Japonica Group]
          Length = 681

 Score =  130 bits (326), Expect = 2e-28
 Identities = 57/71 (80%), Positives = 65/71 (91%)
 Frame = +3

Query: 3   LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
           LYAL+R L+TWQHYLWP+EFVIHSDH A+ YLK QA LNRRHA+WVEF+ETFPYVV +KK
Sbjct: 28  LYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYVVKYKK 87

Query: 183 GKENVVADALS 215
           GKEN+VADALS
Sbjct: 88  GKENIVADALS 98


>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 681

 Score =  130 bits (326), Expect = 2e-28
 Identities = 57/71 (80%), Positives = 65/71 (91%)
 Frame = +3

Query: 3   LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
           LYAL+R L+TWQHYLWP+EFVIHSDH A+ YLK QA LNRRHA+WVEF+ETFPYVV +KK
Sbjct: 28  LYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYVVKYKK 87

Query: 183 GKENVVADALS 215
           GKEN+VADALS
Sbjct: 88  GKENIVADALS 98


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  129 bits (325), Expect = 3e-28
 Identities = 55/71 (77%), Positives = 66/71 (92%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            LYAL+R L+TWQHYLWP+EFVIHSDH ++ ++KSQA LNRRHA+WVEF+ETFPYV+ HKK
Sbjct: 1101 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKHKK 1160

Query: 183  GKENVVADALS 215
            GKENV+ADALS
Sbjct: 1161 GKENVIADALS 1171


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  128 bits (322), Expect = 7e-28
 Identities = 54/71 (76%), Positives = 66/71 (92%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            LYAL+R L+TWQHYLWP+EFVIHSDH ++ ++KSQA LNRRHA+WVEF+ETFPYV+ HKK
Sbjct: 1116 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKHKK 1175

Query: 183  GKENVVADALS 215
            GK+NV+ADALS
Sbjct: 1176 GKDNVIADALS 1186


>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1154

 Score =  125 bits (315), Expect = 4e-27
 Identities = 54/71 (76%), Positives = 66/71 (92%)
 Frame = +3

Query: 3   LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
           LYAL+R L+TWQHYLWP+EFVIHS+H A+ YL+ QA+LNRRHA+WVEF+E+FPY+V +KK
Sbjct: 694 LYALVRALETWQHYLWPKEFVIHSNHEALKYLRGQANLNRRHAKWVEFIESFPYIVRYKK 753

Query: 183 GKENVVADALS 215
           GKENVVADALS
Sbjct: 754 GKENVVADALS 764


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  125 bits (314), Expect = 6e-27
 Identities = 52/71 (73%), Positives = 66/71 (92%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            L+AL+R L+TWQHYLWP+EFVIHSDH ++ +++SQA LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 1085 LFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIKHKK 1144

Query: 183  GKENVVADALS 215
            GKENV+ADALS
Sbjct: 1145 GKENVIADALS 1155


>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 889

 Score =  125 bits (314), Expect = 6e-27
 Identities = 52/71 (73%), Positives = 66/71 (92%)
 Frame = +3

Query: 3   LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
           L+AL+R L+TWQHYLWP+EFVIHSDH ++ +++SQA LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 398 LFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIKHKK 457

Query: 183 GKENVVADALS 215
           GKENV+ADALS
Sbjct: 458 GKENVIADALS 468


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  125 bits (314), Expect = 6e-27
 Identities = 52/71 (73%), Positives = 66/71 (92%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            L+AL+R L+TWQHYLWP+EFVIHSDH ++ +++SQA LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 1085 LFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIKHKK 1144

Query: 183  GKENVVADALS 215
            GKENV+ADALS
Sbjct: 1145 GKENVIADALS 1155


>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
          Length = 1170

 Score =  125 bits (314), Expect = 6e-27
 Identities = 52/71 (73%), Positives = 66/71 (92%)
 Frame = +3

Query: 3   LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
           L+AL+R L+TWQHYLWP+EFVIHSDH ++ +++SQA LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 718 LFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIKHKK 777

Query: 183 GKENVVADALS 215
           GKENV+ADALS
Sbjct: 778 GKENVIADALS 788


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  125 bits (313), Expect = 8e-27
 Identities = 51/71 (71%), Positives = 65/71 (91%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ  LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 1060 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 1119

Query: 183  GKENVVADALS 215
            GKEN++ADALS
Sbjct: 1120 GKENIIADALS 1130


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  125 bits (313), Expect = 8e-27
 Identities = 51/71 (71%), Positives = 65/71 (91%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ  LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 1057 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 1116

Query: 183  GKENVVADALS 215
            GKEN++ADALS
Sbjct: 1117 GKENIIADALS 1127



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/71 (40%), Positives = 45/71 (63%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            L A++  LK W+HYL      I++DH ++ Y+ +Q+ LN R  RW+E ++ +   + +  
Sbjct: 1849 LAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHP 1908

Query: 183  GKENVVADALS 215
            GK NVVADALS
Sbjct: 1909 GKANVVADALS 1919


>gb|ADB27475.1| gag-pol polyprotein [Cenchrus setaceus]
          Length = 287

 Score =  125 bits (313), Expect = 8e-27
 Identities = 51/71 (71%), Positives = 65/71 (91%)
 Frame = +3

Query: 3   LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
           LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ  LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 154 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 213

Query: 183 GKENVVADALS 215
           GKEN++ADALS
Sbjct: 214 GKENIIADALS 224


>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
           Group]
          Length = 848

 Score =  125 bits (313), Expect = 8e-27
 Identities = 51/71 (71%), Positives = 65/71 (91%)
 Frame = +3

Query: 3   LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
           LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ  LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 421 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 480

Query: 183 GKENVVADALS 215
           GKEN++ADALS
Sbjct: 481 GKENIIADALS 491


>gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1234

 Score =  125 bits (313), Expect = 8e-27
 Identities = 51/71 (71%), Positives = 65/71 (91%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ  LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 873  LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 932

Query: 183  GKENVVADALS 215
            GKEN++ADALS
Sbjct: 933  GKENIIADALS 943


>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
          Length = 1431

 Score =  125 bits (313), Expect = 8e-27
 Identities = 51/71 (71%), Positives = 65/71 (91%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ  LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 1002 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 1061

Query: 183  GKENVVADALS 215
            GKEN++ADALS
Sbjct: 1062 GKENIIADALS 1072


>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
          Length = 2388

 Score =  125 bits (313), Expect = 8e-27
 Identities = 51/71 (71%), Positives = 65/71 (91%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ  LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 893  LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 952

Query: 183  GKENVVADALS 215
            GKEN++ADALS
Sbjct: 953  GKENIIADALS 963



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/71 (40%), Positives = 45/71 (63%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            L A++  LK W+HYL      I++DH ++ Y+ +Q+ LN R  RW+E ++ +   + +  
Sbjct: 1824 LAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHP 1883

Query: 183  GKENVVADALS 215
            GK NVVADALS
Sbjct: 1884 GKANVVADALS 1894


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score =  125 bits (313), Expect = 8e-27
 Identities = 51/71 (71%), Positives = 65/71 (91%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ  LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 1151 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 1210

Query: 183  GKENVVADALS 215
            GKEN++ADALS
Sbjct: 1211 GKENIIADALS 1221


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  125 bits (313), Expect = 8e-27
 Identities = 53/71 (74%), Positives = 65/71 (91%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            LYAL+R L+TWQHYLWP+EFVIHSDH ++ ++KSQA LNRRHA+WVEF+ETFPYV+  KK
Sbjct: 1113 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKDKK 1172

Query: 183  GKENVVADALS 215
            GK+NV+ADALS
Sbjct: 1173 GKDNVIADALS 1183


>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
          Length = 1667

 Score =  124 bits (310), Expect = 2e-26
 Identities = 51/71 (71%), Positives = 64/71 (90%)
 Frame = +3

Query: 3    LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
            LYAL+R L+TWQHYLWP+EFVIHSDH ++ ++ SQ  LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 980  LYALVRTLETWQHYLWPKEFVIHSDHESLKHIHSQGKLNRRHAKWVEFIESFPYVIKHKK 1039

Query: 183  GKENVVADALS 215
            GKEN++ADALS
Sbjct: 1040 GKENIIADALS 1050


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