BLASTX nr result
ID: Rheum21_contig00031829
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00031829
(215 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 130 2e-28
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 130 2e-28
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 130 2e-28
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 129 3e-28
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 128 7e-28
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group] 125 4e-27
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 125 6e-27
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 125 6e-27
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 125 6e-27
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group] 125 6e-27
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 125 8e-27
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 125 8e-27
gb|ADB27475.1| gag-pol polyprotein [Cenchrus setaceus] 125 8e-27
dbj|BAH80072.1| putative unclassified retrotransposon protein [O... 125 8e-27
gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japoni... 125 8e-27
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group] 125 8e-27
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group] 125 8e-27
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 125 8e-27
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 125 8e-27
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group] 124 2e-26
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 130 bits (326), Expect = 2e-28
Identities = 57/71 (80%), Positives = 65/71 (91%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH A+ YLK QA LNRRHA+WVEF+ETFPYVV +KK
Sbjct: 1060 LYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYVVKYKK 1119
Query: 183 GKENVVADALS 215
GKEN+VADALS
Sbjct: 1120 GKENIVADALS 1130
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 130 bits (326), Expect = 2e-28
Identities = 57/71 (80%), Positives = 65/71 (91%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH A+ YLK QA LNRRHA+WVEF+ETFPYVV +KK
Sbjct: 28 LYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYVVKYKK 87
Query: 183 GKENVVADALS 215
GKEN+VADALS
Sbjct: 88 GKENIVADALS 98
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 130 bits (326), Expect = 2e-28
Identities = 57/71 (80%), Positives = 65/71 (91%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH A+ YLK QA LNRRHA+WVEF+ETFPYVV +KK
Sbjct: 28 LYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYVVKYKK 87
Query: 183 GKENVVADALS 215
GKEN+VADALS
Sbjct: 88 GKENIVADALS 98
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 129 bits (325), Expect = 3e-28
Identities = 55/71 (77%), Positives = 66/71 (92%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH ++ ++KSQA LNRRHA+WVEF+ETFPYV+ HKK
Sbjct: 1101 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKHKK 1160
Query: 183 GKENVVADALS 215
GKENV+ADALS
Sbjct: 1161 GKENVIADALS 1171
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 128 bits (322), Expect = 7e-28
Identities = 54/71 (76%), Positives = 66/71 (92%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH ++ ++KSQA LNRRHA+WVEF+ETFPYV+ HKK
Sbjct: 1116 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKHKK 1175
Query: 183 GKENVVADALS 215
GK+NV+ADALS
Sbjct: 1176 GKDNVIADALS 1186
>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1154
Score = 125 bits (315), Expect = 4e-27
Identities = 54/71 (76%), Positives = 66/71 (92%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHS+H A+ YL+ QA+LNRRHA+WVEF+E+FPY+V +KK
Sbjct: 694 LYALVRALETWQHYLWPKEFVIHSNHEALKYLRGQANLNRRHAKWVEFIESFPYIVRYKK 753
Query: 183 GKENVVADALS 215
GKENVVADALS
Sbjct: 754 GKENVVADALS 764
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 125 bits (314), Expect = 6e-27
Identities = 52/71 (73%), Positives = 66/71 (92%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
L+AL+R L+TWQHYLWP+EFVIHSDH ++ +++SQA LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 1085 LFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIKHKK 1144
Query: 183 GKENVVADALS 215
GKENV+ADALS
Sbjct: 1145 GKENVIADALS 1155
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 125 bits (314), Expect = 6e-27
Identities = 52/71 (73%), Positives = 66/71 (92%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
L+AL+R L+TWQHYLWP+EFVIHSDH ++ +++SQA LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 398 LFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIKHKK 457
Query: 183 GKENVVADALS 215
GKENV+ADALS
Sbjct: 458 GKENVIADALS 468
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 125 bits (314), Expect = 6e-27
Identities = 52/71 (73%), Positives = 66/71 (92%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
L+AL+R L+TWQHYLWP+EFVIHSDH ++ +++SQA LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 1085 LFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIKHKK 1144
Query: 183 GKENVVADALS 215
GKENV+ADALS
Sbjct: 1145 GKENVIADALS 1155
>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
Length = 1170
Score = 125 bits (314), Expect = 6e-27
Identities = 52/71 (73%), Positives = 66/71 (92%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
L+AL+R L+TWQHYLWP+EFVIHSDH ++ +++SQA LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 718 LFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIKHKK 777
Query: 183 GKENVVADALS 215
GKENV+ADALS
Sbjct: 778 GKENVIADALS 788
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 125 bits (313), Expect = 8e-27
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 1060 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 1119
Query: 183 GKENVVADALS 215
GKEN++ADALS
Sbjct: 1120 GKENIIADALS 1130
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 125 bits (313), Expect = 8e-27
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 1057 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 1116
Query: 183 GKENVVADALS 215
GKEN++ADALS
Sbjct: 1117 GKENIIADALS 1127
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
L A++ LK W+HYL I++DH ++ Y+ +Q+ LN R RW+E ++ + + +
Sbjct: 1849 LAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHP 1908
Query: 183 GKENVVADALS 215
GK NVVADALS
Sbjct: 1909 GKANVVADALS 1919
>gb|ADB27475.1| gag-pol polyprotein [Cenchrus setaceus]
Length = 287
Score = 125 bits (313), Expect = 8e-27
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 154 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 213
Query: 183 GKENVVADALS 215
GKEN++ADALS
Sbjct: 214 GKENIIADALS 224
>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 848
Score = 125 bits (313), Expect = 8e-27
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 421 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 480
Query: 183 GKENVVADALS 215
GKEN++ADALS
Sbjct: 481 GKENIIADALS 491
>gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1234
Score = 125 bits (313), Expect = 8e-27
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 873 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 932
Query: 183 GKENVVADALS 215
GKEN++ADALS
Sbjct: 933 GKENIIADALS 943
>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
Length = 1431
Score = 125 bits (313), Expect = 8e-27
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 1002 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 1061
Query: 183 GKENVVADALS 215
GKEN++ADALS
Sbjct: 1062 GKENIIADALS 1072
>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
Length = 2388
Score = 125 bits (313), Expect = 8e-27
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 893 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 952
Query: 183 GKENVVADALS 215
GKEN++ADALS
Sbjct: 953 GKENIIADALS 963
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
L A++ LK W+HYL I++DH ++ Y+ +Q+ LN R RW+E ++ + + +
Sbjct: 1824 LAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHP 1883
Query: 183 GKENVVADALS 215
GK NVVADALS
Sbjct: 1884 GKANVVADALS 1894
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 125 bits (313), Expect = 8e-27
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH ++ +++SQ LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 1151 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKK 1210
Query: 183 GKENVVADALS 215
GKEN++ADALS
Sbjct: 1211 GKENIIADALS 1221
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 125 bits (313), Expect = 8e-27
Identities = 53/71 (74%), Positives = 65/71 (91%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH ++ ++KSQA LNRRHA+WVEF+ETFPYV+ KK
Sbjct: 1113 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKDKK 1172
Query: 183 GKENVVADALS 215
GK+NV+ADALS
Sbjct: 1173 GKDNVIADALS 1183
>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
Length = 1667
Score = 124 bits (310), Expect = 2e-26
Identities = 51/71 (71%), Positives = 64/71 (90%)
Frame = +3
Query: 3 LYALIRVLKTWQHYLWPREFVIHSDHAAISYLKSQAHLNRRHARWVEFMETFPYVVVHKK 182
LYAL+R L+TWQHYLWP+EFVIHSDH ++ ++ SQ LNRRHA+WVEF+E+FPYV+ HKK
Sbjct: 980 LYALVRTLETWQHYLWPKEFVIHSDHESLKHIHSQGKLNRRHAKWVEFIESFPYVIKHKK 1039
Query: 183 GKENVVADALS 215
GKEN++ADALS
Sbjct: 1040 GKENIIADALS 1050