BLASTX nr result

ID: Rheum21_contig00031560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00031560
         (650 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   141   2e-31
gb|EMJ21964.1| hypothetical protein PRUPE_ppa026078mg, partial [...    85   2e-14
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    83   8e-14
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595...    79   2e-12
gb|EOY06958.1| Uncharacterized protein TCM_021520 [Theobroma cacao]    78   2e-12
ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S...    77   6e-12
ref|XP_004237689.1| PREDICTED: uncharacterized protein LOC101243...    76   7e-12
gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus pe...    76   1e-11
ref|XP_004252466.1| PREDICTED: uncharacterized protein LOC101263...    75   2e-11
gb|EOY02234.1| Uncharacterized protein TCM_011921 [Theobroma cacao]    75   2e-11
gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus pe...    74   3e-11
ref|XP_004240675.1| PREDICTED: uncharacterized protein LOC101260...    74   5e-11
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]          74   5e-11
gb|EMJ15800.1| hypothetical protein PRUPE_ppa022684mg [Prunus pe...    73   6e-11
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...    73   8e-11
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    73   8e-11
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    73   8e-11
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    72   1e-10
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    72   1e-10
gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao]    72   1e-10

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  141 bits (355), Expect = 2e-31
 Identities = 75/192 (39%), Positives = 113/192 (58%)
 Frame = +2

Query: 56  QRPMYDAYFYLWATKIKWKNAFWNLLSDFIIQTQLPCLIIGDLNEIEAPKEKSGGCSHNP 235
           Q   + A F     + ++K++FW+ L  ++     P +I+GD NEI +P +K GG   + 
Sbjct: 101 QNLQFVAIFIYAPAQKEFKSSFWDELIAYVSSLSFPFIILGDFNEINSPSDKLGGAPFSS 160

Query: 236 TRFKRLNNSRNKCDLLNIPT*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTK 415
           +R   + N  ++ D   I   G  FT RK K   +NI+E+L+R +     L  FP  F K
Sbjct: 161 SRAYYMQNLFSQVDCTEISFTGQIFTWRKKKDGPNNIHERLDRGVASTSWLMLFPHAFLK 220

Query: 416 NHAFTSSDHCPIAVELGNPNLNKAQPYKFEKMWTTRKDFENVVKQAWRVENQGSHMYNLV 595
           +H FTSSDHC I++E    N +KA P++FEKMW TRKD++++VK+ W  +  GSHM+N V
Sbjct: 221 HHIFTSSDHCQISLEYLANNKSKAPPFRFEKMWCTRKDYDSLVKRTWCTKFYGSHMFNFV 280

Query: 596 KKQWPSKLVRKN 631
           +K    KLV+ N
Sbjct: 281 QK---CKLVKIN 289


>gb|EMJ21964.1| hypothetical protein PRUPE_ppa026078mg, partial [Prunus persica]
          Length = 400

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 45/137 (32%), Positives = 70/137 (51%)
 Frame = +2

Query: 167 LIIGDLNEIEAPKEKSGGCSHNPTRFKRLNNSRNKCDLLNIPT*GNSFT*RKNKTEIDNI 346
           +++GD N +  P EK GG    P+     N   N  + +++   G  FT      +   I
Sbjct: 236 ILMGDFNNVCTPSEKLGGSISLPSAMADFNGFINDSETISLNAAGIPFTWCNGHRDNSVI 295

Query: 347 YEKLNRVLIHDQILQWFP*IFTKNHAFTSSDHCPIAVELGNPNLNKAQPYKFEKMWTTRK 526
           YE+L+RVL++   L  +P    +N     SDH PI +   + N N  + +KFE MW +  
Sbjct: 296 YERLDRVLLNPNWLNLYPNCAIQNLPILRSDHGPILLSCQHRNRNNPRAFKFEAMWLSHP 355

Query: 527 DFENVVKQAWRVENQGS 577
           DF+ +V QAW V+ QG+
Sbjct: 356 DFQRIVLQAWSVDYQGN 372


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
 Frame = +2

Query: 122 WNLLSDFIIQTQLPCLIIGDLNEIEAPKEKSGGCSHNPTRFKRLNNSRNKCDLLNIPT*G 301
           WN L +       P ++IGD NE   P E+ GG  H+  R    +N  N C+LL++ T G
Sbjct: 118 WNYLVNINDTITGPWMLIGDFNETHLPSEQRGGTFHH-NRAATFSNFMNNCNLLDLTTTG 176

Query: 302 NSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNHAFTSSDHCPIAVELGNPNLN 481
             FT  KN   I  + +KL+R + +      FP  F +      SDH P+ +  G   L 
Sbjct: 177 GRFTWHKNNNGIRILSKKLDRGMANVDWRLSFPEAFVEVLCRLHSDHNPLLLRFGGLPLT 236

Query: 482 KA-QPYKFEKMWTTRKDFENVVKQAW 556
           +  +P++FE  W    D+ NVVK++W
Sbjct: 237 RGPRPFRFEAAWIDHYDYGNVVKRSW 262


>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
          Length = 866

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 44/164 (26%), Positives = 80/164 (48%)
 Frame = +2

Query: 110 KNAFWNLLSDFIIQTQLPCLIIGDLNEIEAPKEKSGGCSHNPTRFKRLNNSRNKCDLLNI 289
           +   WN +        LP L+ GD N I +P+EK GG        +   N      L ++
Sbjct: 76  REELWNSIQHISSHISLPWLVGGDFNVILSPEEKLGGFPVYCQETEDFANCIATSSLYDL 135

Query: 290 PT*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNHAFTSSDHCPIAVELGN 469
              G+++T    ++E   I+++L+R+L + +++  FP +  K+     SDH P+ +E   
Sbjct: 136 GYIGSTYTWWNGRSEDACIFKRLDRILGNQRLMNLFPTMKIKHLIKKGSDHSPLVLECSQ 195

Query: 470 PNLNKAQPYKFEKMWTTRKDFENVVKQAWRVENQGSHMYNLVKK 601
                 +P+KF   WT    FE +V++ WR++  G+  Y + +K
Sbjct: 196 NTEEIIKPFKFLNFWTKHSSFEKLVEEHWRLDFYGNPFYMVQQK 239


>gb|EOY06958.1| Uncharacterized protein TCM_021520 [Theobroma cacao]
          Length = 754

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 49/181 (27%), Positives = 86/181 (47%)
 Frame = +2

Query: 62  PMYDAYFYLWATKIKWKNAFWNLLSDFIIQTQLPCLIIGDLNEIEAPKEKSGGCSHNPTR 241
           P+Y ++ Y   T+++ +   W+ L       Q P L+ GD N I +  E+  G   +   
Sbjct: 297 PVYTSFVYAKCTRLE-RRELWSNLRIISDSMQAPWLVGGDFNSIVSCDERLHGAIPHDGS 355

Query: 242 FKRLNNSRNKCDLLNIPT*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNH 421
            + L+++   C LL+    GNSFT   N+     ++++L+RV+ + +  ++F     ++ 
Sbjct: 356 MEDLSSTLLDCGLLDAGFEGNSFTWTNNR-----MFQRLDRVVYNHEWAEFFSSTRVQHL 410

Query: 422 AFTSSDHCPIAVELGNPNLNKAQPYKFEKMWTTRKDFENVVKQAWRVENQGSHMYNLVKK 601
               SDHCP+ +   N N      ++F   WT   DF   V+++W    Q S M  L  K
Sbjct: 411 NRDGSDHCPLLISCSNTNARGPSTFRFLHAWTKHHDFLPFVEKSWNAPTQASGMTALWYK 470

Query: 602 Q 604
           Q
Sbjct: 471 Q 471


>ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
           gi|241921088|gb|EER94232.1| hypothetical protein
           SORBIDRAFT_01g021750 [Sorghum bicolor]
          Length = 426

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
 Frame = +2

Query: 116 AFWNLLSDFII-QTQLPCLIIGDLNEIEAPKEKSGGCSHNPTRFKRLNNSRNKCDLLNIP 292
           + W  + DF++  T +P   +GDLN I  P EKSG    +  R     +S  +C  +++ 
Sbjct: 120 SIWMQVHDFVVANTNMPMFCMGDLNNIMHPDEKSGPGRPDLRRINSFCDSVKECGFIDLG 179

Query: 293 T*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNHAFTSSDHCPIAVELGNP 472
             G ++T    +      +E+L+R L + +    +P     +     SDH PI   L + 
Sbjct: 180 YSGPAYTWTNKRFSTTPTFERLDRCLANAEWCMMYPRTTVYHLPMLRSDHTPILALLDSN 239

Query: 473 NLNKAQPYKFEKMWTTRKDFENVVKQAWR 559
             N  +P++FE  W   +D+E   K++W+
Sbjct: 240 TYNNTKPFRFENWWLMEQDYEETAKKSWQ 268


>ref|XP_004237689.1| PREDICTED: uncharacterized protein LOC101243885 [Solanum
           lycopersicum]
          Length = 393

 Score = 76.3 bits (186), Expect = 7e-12
 Identities = 44/167 (26%), Positives = 82/167 (49%)
 Frame = +2

Query: 86  LWATKIKWKNAFWNLLSDFIIQTQLPCLIIGDLNEIEAPKEKSGGCSHNPTRFKRLNNSR 265
           LW + ++W +            T+ P  +IGD N I +  EK GG  +N T+     N  
Sbjct: 66  LWDSMLQWSD------------TRYPWCVIGDFNFISSSNEKLGGRDYNITKSLEFINII 113

Query: 266 NKCDLLNIPT*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNHAFTSSDHC 445
             C L+++   G  FT   ++ +   I+++L+R +I+DQ L+  P     +    SS HC
Sbjct: 114 ETCGLVDMGYNGQKFTWCNHRKDGARIWKRLHRGMINDQRLEKMPHSSITHLPSVSSGHC 173

Query: 446 PIAVELGNPNLNKAQPYKFEKMWTTRKDFENVVKQAWRVENQGSHMY 586
           P+ +++ + + N  + +KF   WT    F   +++ W+ +  G+ M+
Sbjct: 174 PLLMKVSDNHANVIRYFKFLNYWTDSDTFLATIEKCWKRKVVGNRMW 220


>gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
          Length = 1011

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
 Frame = +2

Query: 122 WNLLSDFIIQTQLPCLIIGDLNEIEAPKEKSGGCSHNPTRFKRLNNSRNKCDLLNIPT*G 301
           WNLL D   +++LP + +GD NE+    EK GG      +     ++ + C L ++   G
Sbjct: 90  WNLLRDLASESRLPWVCMGDFNELLYANEKEGGLIRPVRQMLAFRDAISDCHLDDMGFEG 149

Query: 302 NSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNHAFTSSDHCPIAVELGNPNL- 478
            +FT     T    I E+L+RVL + +    FP     +    SSDH PI +E  +P + 
Sbjct: 150 ATFT--WFSTRNGGIKERLDRVLANCEWRSLFPQATVHHLEPCSSDHLPILLE-ASPTMK 206

Query: 479 --NKAQPYKFEKMWTTRKDFENVVKQAWRVENQGSHMYNL 592
              +   ++FE MWT  +D E+++  AW     G+ MY +
Sbjct: 207 PWRRRSFFRFESMWTQHEDCESIIANAWNTSFTGTLMYQV 246


>ref|XP_004252466.1| PREDICTED: uncharacterized protein LOC101263798 [Solanum
           lycopersicum]
          Length = 358

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
 Frame = +2

Query: 104 KWKNAFWNLLSDFIIQ---TQLPCLIIGDLNEIEAPKEKSGGCSHNPTRFKRLNNSRNKC 274
           K K  F   L D +IQ   T  P  IIGD N I + +EK GG  +N ++     +    C
Sbjct: 34  KCKEHFRRTLWDRLIQWSDTDHPWCIIGDFNVIYSTQEKLGGREYNISKSLDFISIIEYC 93

Query: 275 DLLNIPT*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNHAFTSSDHCPIA 454
            L+++   G  FT   ++ +   I+++L+R L +D+ L+  P           SDHCP+ 
Sbjct: 94  GLVDMGYNGQPFTWCNHRKDAARIWKRLDRGLANDKWLEKMPHTNITRLPSVGSDHCPLL 153

Query: 455 VELGNPNLNKAQPYKFEKMWTTRKDFENVVKQAWRVENQGSHMYNLVKKQWPSKLVRKNG 634
           +E+ +      + +KF   WT    F   V++ W  +  G+HM+ L  K        +N 
Sbjct: 154 MEMNDRKDEVIKYFKFLNCWTENDSFYQTVEKCWNRKVVGNHMWILHTKMRRLTTTLRNW 213

Query: 635 TK 640
           +K
Sbjct: 214 SK 215


>gb|EOY02234.1| Uncharacterized protein TCM_011921 [Theobroma cacao]
          Length = 926

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 44/165 (26%), Positives = 81/165 (49%)
 Frame = +2

Query: 62  PMYDAYFYLWATKIKWKNAFWNLLSDFIIQTQLPCLIIGDLNEIEAPKEKSGGCSHNPTR 241
           P++ ++ Y   T+I+ +   W+ L       Q P L+ GD N I +  E+  G   +   
Sbjct: 20  PVFTSFVYAKCTRIE-RRELWSSLRIISDGMQAPWLVGGDFNSIVSCDERLNGAIPHDGS 78

Query: 242 FKRLNNSRNKCDLLNIPT*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNH 421
            + L+++   C LL+    GNSFT   N+     ++++L+RV+ + +  + F     ++ 
Sbjct: 79  MEDLSSTLFDCGLLDASFEGNSFTWTNNR-----MFQRLDRVVYNQEWAELFSSTRVQHL 133

Query: 422 AFTSSDHCPIAVELGNPNLNKAQPYKFEKMWTTRKDFENVVKQAW 556
               SDHCP+ +   N N     P++F   WT   DF + V+++W
Sbjct: 134 NRDGSDHCPLLISCSNTNQRGPAPFRFLHAWTKHHDFLSFVEKSW 178


>gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus persica]
          Length = 1171

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 45/167 (26%), Positives = 73/167 (43%)
 Frame = +2

Query: 77  YFYLWATKIKWKNAFWNLLSDFIIQTQLPCLIIGDLNEIEAPKEKSGGCSHNPTRFKRLN 256
           + Y +  K K  N  W  +         P L++GD N I +  EK GG        +  N
Sbjct: 197 FIYAYPQKAKQSN-LWREIVSLKPTNNHPWLMLGDFNSICSMNEKVGGSFETSQAMRNFN 255

Query: 257 NSRNKCDLLNIPT*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNHAFTSS 436
              + C+++++   G  FT      +   IYE+L+R L +   ++  P    +N     S
Sbjct: 256 KVIDDCEVVSLAATGVPFTWCNGHHDNTIIYERLDRALANPDWMRLLPHSELQNLPIVRS 315

Query: 437 DHCPIAVELGNPNLNKAQPYKFEKMWTTRKDFENVVKQAWRVENQGS 577
           DH PI ++    +    + +KFE MW   K+F+ VV Q W     G+
Sbjct: 316 DHGPIFLKCNQISRRIPKTFKFEAMWLAHKNFDQVVSQVWNCSYVGN 362


>ref|XP_004240675.1| PREDICTED: uncharacterized protein LOC101260732 [Solanum
           lycopersicum]
          Length = 333

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 43/162 (26%), Positives = 81/162 (50%)
 Frame = +2

Query: 155 QLPCLIIGDLNEIEAPKEKSGGCSHNPTRFKRLNNSRNKCDLLNIPT*GNSFT*RKNKTE 334
           ++P  IIGD N I + +EK GG  +N ++     ++   C L+++   G  FT   ++  
Sbjct: 54  EIPWCIIGDFNVIYSSQEKLGGREYNISKSVDFISTMEHCGLVDLGYNGQPFTWCNHRKN 113

Query: 335 IDNIYEKLNRVLIHDQILQWFP*IFTKNHAFTSSDHCPIAVELGNPNLNKAQPYKFEKMW 514
              I+++L+R L +D+ L   P     + +   SDHCP+ +E+ +   +  + +KF   W
Sbjct: 114 DARIWKRLDRGLANDKWLDKMPHTIITHLSAVGSDHCPLLMEMKDRKDDVIKYFKFLNCW 173

Query: 515 TTRKDFENVVKQAWRVENQGSHMYNLVKKQWPSKLVRKNGTK 640
           T    F  +V++ W  +  G+ M+ L  K     +  +N +K
Sbjct: 174 TENDSFYQIVEKCWNEKVVGNPMWILHTKMKRLTITLRNWSK 215


>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
 Frame = +2

Query: 128 LLSDFIIQTQL----PCLIIGDLNEIEAPKEKSGGCSHNPTRFKRLNNSRNKCDLLNIPT 295
           LL D+++   +    P +++GD NE++   E S GC  +  R      S     L ++ T
Sbjct: 516 LLWDYLVAQSMVFQGPWIVLGDFNEVKFSYE-SKGCQFSHQRADMFATSLGDSGLFDLKT 574

Query: 296 *GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNHAFTSSDHCPIAVEL-GNP 472
            G  F+  +      ++ +KL+RV I++  L  FP  + +      SDHCPI V   G P
Sbjct: 575 IGRQFSWYRRVKNYVDVAKKLDRVCINNSWLSIFPEAYAEVLNRLQSDHCPILVRCKGRP 634

Query: 473 NLNKAQPYKFEKMWTTRKDFENVVKQAWRVENQGSH 580
                +P++F   W T   + ++V Q+W   N+G H
Sbjct: 635 QPKGNRPFRFIAAWATHPGYRDIVNQSWWSGNRGIH 670


>gb|EMJ15800.1| hypothetical protein PRUPE_ppa022684mg [Prunus persica]
          Length = 696

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
 Frame = +2

Query: 110 KNAFWNLLSDFIIQTQLPCLIIGDLNEIEAPKEKSGGCSHNPTRFKRLNNSRNKCDLLNI 289
           K  FW  + +       P   IGD NE+  P+EK GG +  PTR + L +      L+++
Sbjct: 209 KPIFWESVRNLCHDVSQPWCCIGDFNELVWPQEKWGGATWCPTRVRYLRDFMENNSLMDV 268

Query: 290 PT*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNHAFTSSDHCPIAVELGN 469
              G  FT  K       I E+L+R L++   L+ +P     +     SD CPI +   +
Sbjct: 269 GFSGAQFTWAKKDNGEVVIQERLHRGLVNATWLESWPNTMVSHCPRMGSDRCPIILNF-S 327

Query: 470 PNLNKAQP-YKFEKMWTTRKDFENVVKQAWRVEN 568
           P +   +P ++FE  WT   +  +VV  AW + +
Sbjct: 328 PTVKNVKPRFRFESFWTENSECHDVVNLAWNMRS 361


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
           lycopersicum]
          Length = 1333

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 41/151 (27%), Positives = 74/151 (49%)
 Frame = +2

Query: 149 QTQLPCLIIGDLNEIEAPKEKSGGCSHNPTRFKRLNNSRNKCDLLNIPT*GNSFT*RKNK 328
           +T  P  IIGD N I +  EK GG  +N  +     N    C L+++   G  +T   ++
Sbjct: 71  ETMYPWSIIGDFNVITSTSEKLGGRDYNINKSLEFINIIEACGLVDMGYHGQDYTWCNHR 130

Query: 329 TEIDNIYEKLNRVLIHDQILQWFP*IFTKNHAFTSSDHCPIAVELGNPNLNKAQPYKFEK 508
            +   I+++L+R + +D+ ++  P     +     SDHCP+ +E+ +   N  + +KF  
Sbjct: 131 KDGARIWKRLDRGMTNDKWIETIPHSSITHLPSVGSDHCPLLMEICDIQSNTIKYFKFLN 190

Query: 509 MWTTRKDFENVVKQAWRVENQGSHMYNLVKK 601
            WT    F   V++ W+ +  G+ M+N   K
Sbjct: 191 CWTENDSFLETVEKCWKRDVIGNPMWNFHTK 221


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
 Frame = +2

Query: 110  KNAFWNLL-SDFIIQTQLPCLIIGDLNEIEAPKEKSGGCSHNPTRFKRLNNSRNKCDLLN 286
            K AFW L+ S F +Q+ LP L++GD NE+  P EK GG    P R K   +  N   L +
Sbjct: 719  KRAFWRLMYSRFPVQS-LPWLVLGDFNEVLDPSEKWGGGPPLPWRIKLFRDFLNNGHLRD 777

Query: 287  IPT*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNHAFTSSDHCPIAVELG 466
            +   G  F+    +     I E+L+R L +       P     +     SDH P+ ++  
Sbjct: 778  LHFKGPGFSWFAMRHGRVFIKERLDRALGNIAWSSSQPNTQILHLPKIGSDHRPLLLDSN 837

Query: 467  NPNLNKAQPYKFEKMWTTRKDFENVVKQAWRVENQGSHM 583
               LNK + ++FE+MWTT +++ +V++++W     GS M
Sbjct: 838  PKMLNKTRLFRFEQMWTTHEEYSDVIQRSWPPAFGGSAM 876


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
 Frame = +2

Query: 65  MYDAYFYLWATKIKWKNAF-------WNLLSDFIIQTQLPCLIIGDLNEIEAPKEKSGGC 223
           + D   Y+W   + + + +       W  ++D+I +  L  +I+GD N+IE   +K GG 
Sbjct: 97  LVDEDVYIWNLILLYGSPYLDNRGEVWERIADYISRNPLDSVIMGDFNQIEFLNQKMGGS 156

Query: 224 SHNPTRFKRLNNSRNKCDLLNIPT*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP* 403
           ++ P + +  +  R++  L  I   G +FT   N++E + +YE+L+R    +  L  +  
Sbjct: 157 TYIPGK-ETFSQWRDQLGLSEINFQGQNFTWCNNRSEPERVYERLDRAYATEDWLHRYSE 215

Query: 404 IFTKNHAFTSSDHCPIAVELGNPNLNKAQPYKFEKMWTTRKDFENVVKQAWRVENQGSHM 583
               N     SDH PI +        K    K E      K+ E ++ + W+V   GS M
Sbjct: 216 ARILNMPILISDHSPILLISSPIYPKKKSTIKMESWCLDFKEVEILISKHWKVSYSGSPM 275

Query: 584 YNLVKK 601
           Y + +K
Sbjct: 276 YEVAQK 281


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
 Frame = +2

Query: 62  PMYDAYFYLWATKIKWKNAFWNLLSDFIIQTQLPCLIIGDLNEIEAPKEKSGGCSHNPTR 241
           P +   F     K + ++ FWNLL     Q + P L  GD NE+    E  G    +   
Sbjct: 103 PPWRISFVYGEPKRELRHFFWNLLRRLHDQWRGPWLCCGDFNEVLCLDEHLGMRERSEPH 162

Query: 242 FKRLNNSRNKCDLLNIPT*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNH 421
            +   +  + C L+++   G  FT    +    N   +L+R + + +  ++F     +N 
Sbjct: 163 MQHFRSCLDDCGLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCLVENV 222

Query: 422 AFTSSDHCPIAVELGNPNLNK-----AQPYKFEKMWTTRKDFENVVKQAWRVENQG 574
             TSSDH  I+++L   N  +      Q ++FE  W   +D+  VV+ +WR+ + G
Sbjct: 223 ITTSSDHYAISIDLSRRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENSWRISSAG 278


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
           protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
 Frame = +2

Query: 62  PMYDAYFYLWATKIKWKNAFWNLLSDFIIQTQLPCLIIGDLNEIEAPKEKSGGCSHNPTR 241
           P +   F     K + ++ FWNLL     Q + P L  GD NE+    E  G    +   
Sbjct: 60  PPWRISFVYGEPKRELRHFFWNLLRRLHDQWRGPWLCCGDFNEVLCLDEHLGMRERSEPH 119

Query: 242 FKRLNNSRNKCDLLNIPT*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNH 421
            +   +  + C L+++   G  FT    +    N   +L+R + + +  ++F     +N 
Sbjct: 120 MQHFRSCLDDCGLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCLVENV 179

Query: 422 AFTSSDHCPIAVELGNPNLNK-----AQPYKFEKMWTTRKDFENVVKQAWRVENQG 574
             TSSDH  I+++L   N  +      Q ++FE  W   +D+  VV+ +WR+ + G
Sbjct: 180 ITTSSDHYAISIDLSRRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENSWRISSAG 235


>gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao]
          Length = 2214

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 43/165 (26%), Positives = 80/165 (48%)
 Frame = +2

Query: 62   PMYDAYFYLWATKIKWKNAFWNLLSDFIIQTQLPCLIIGDLNEIEAPKEKSGGCSHNPTR 241
            P++ ++ Y   T+I+ +   W  L       Q P L+ GD N I +  E+  G   +   
Sbjct: 946  PVFTSFVYAKCTRIE-RRELWTSLRIISDGMQAPWLVGGDFNSIVSCDERLNGAIPHDGS 1004

Query: 242  FKRLNNSRNKCDLLNIPT*GNSFT*RKNKTEIDNIYEKLNRVLIHDQILQWFP*IFTKNH 421
             + L+++   C LL+    GNSFT   N+     ++++L+RV+ + +  ++F     ++ 
Sbjct: 1005 MEDLSSTLFDCGLLDAGFEGNSFTWTNNR-----MFQRLDRVVYNQEWAEFFSSTRVQHL 1059

Query: 422  AFTSSDHCPIAVELGNPNLNKAQPYKFEKMWTTRKDFENVVKQAW 556
                SDHCP+ +   N N      ++F   WT   DF + V+++W
Sbjct: 1060 NRDGSDHCPLLISCSNTNQRGPATFRFLHAWTKHHDFISFVEKSW 1104


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