BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00031558
         (485 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_624333.1| replicase polyprotein [Citrus leaf blotch virus...    49   2e-06
gb|ACH73184.1| replicase polyprotein [Dweet mottle virus]              49   2e-06
gb|ACF94740.1| putative replicase polyprotein [Citrus leaf blotc...    49   2e-06
gb|ACF94738.1| putative replicase polyprotein [Citrus leaf blotc...    49   2e-06

>ref|NP_624333.1| replicase polyprotein [Citrus leaf blotch virus]
           gi|81964041|sp|Q91QZ3.1|RDRP_CLBVS RecName: Full=RNA
           replication protein; Includes: RecName:
           Full=RNA-directed RNA polymerase; Includes: RecName:
           Full=Helicase gi|14270249|emb|CAC39422.1| hypothetical
           protein [Citrus leaf blotch virus]
          Length = 1962

 Score = 48.5 bits (114), Expect(2) = 2e-06
 Identities = 22/41 (53%), Positives = 25/41 (60%)
 Frame = +3

Query: 90  HFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK 212
           H HP S+  ENH+L DV PGVVN    + C IKE KV   K
Sbjct: 71  HSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFK 111



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 1   NSLFAHSLEPFLKKNLTGLGIELFQNG 81
           N  FA+SL  + KK  + +GIEL+ NG
Sbjct: 41  NKHFAYSLNSYQKKIASKVGIELYPNG 67


>gb|ACH73184.1| replicase polyprotein [Dweet mottle virus]
          Length = 1962

 Score = 48.5 bits (114), Expect(2) = 2e-06
 Identities = 22/41 (53%), Positives = 25/41 (60%)
 Frame = +3

Query: 90  HFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK 212
           H HP S+  ENH+L DV PGVVN    + C IKE KV   K
Sbjct: 71  HSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFK 111



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 1   NSLFAHSLEPFLKKNLTGLGIELFQNG 81
           N  FA+SL  + KK  + +GIEL+ NG
Sbjct: 41  NKHFAYSLNSYQKKIASKVGIELYPNG 67


>gb|ACF94740.1| putative replicase polyprotein [Citrus leaf blotch virus]
          Length = 1962

 Score = 48.5 bits (114), Expect(2) = 2e-06
 Identities = 22/41 (53%), Positives = 25/41 (60%)
 Frame = +3

Query: 90  HFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK 212
           H HP S+  ENH+L DV PGVVN    + C IKE KV   K
Sbjct: 71  HSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFK 111



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 1   NSLFAHSLEPFLKKNLTGLGIELFQNG 81
           N  FA+SL  + KK  + +GIEL+ NG
Sbjct: 41  NKHFAYSLNSYQKKIASKVGIELYPNG 67


>gb|ACF94738.1| putative replicase polyprotein [Citrus leaf blotch virus]
          Length = 1962

 Score = 48.5 bits (114), Expect(2) = 2e-06
 Identities = 22/41 (53%), Positives = 25/41 (60%)
 Frame = +3

Query: 90  HFHPFSRTPENHILCDVSPGVVNADSFISCPIKEKKVQCIK 212
           H HP S+  ENH+L DV PGVVN    + C IKE KV   K
Sbjct: 71  HSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFK 111



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 1   NSLFAHSLEPFLKKNLTGLGIELFQNG 81
           N  FA+SL  + KK  + +GIEL+ NG
Sbjct: 41  NKHFAYSLNSYQKKIASKVGIELYPNG 67