BLASTX nr result
ID: Rheum21_contig00030835
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00030835
(264 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003616106.1| Nibrin [Medicago truncatula] gi|355517441|gb... 94 2e-17
ref|XP_003544952.1| PREDICTED: nibrin-like isoform X1 [Glycine m... 92 6e-17
ref|XP_003518356.1| PREDICTED: nibrin-like [Glycine max] 92 6e-17
ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853... 91 2e-16
gb|EMJ02895.1| hypothetical protein PRUPE_ppa004302mg [Prunus pe... 90 3e-16
gb|ESW13980.1| hypothetical protein PHAVU_008G242800g [Phaseolus... 89 5e-16
ref|XP_004490746.1| PREDICTED: nibrin-like isoform X1 [Cicer ari... 89 8e-16
ref|XP_002525874.1| Nibrin, putative [Ricinus communis] gi|22353... 87 2e-15
ref|XP_004170596.1| PREDICTED: uncharacterized protein LOC101228... 82 1e-13
ref|XP_004145862.1| PREDICTED: nibrin-like [Cucumis sativus] 82 1e-13
gb|EMS55326.1| Nibrin [Triticum urartu] 80 4e-13
dbj|BAJ86788.1| predicted protein [Hordeum vulgare subsp. vulgare] 80 4e-13
gb|ACB56933.1| NBS1 [Triticum turgidum] gi|171906274|gb|ACB56934... 80 4e-13
gb|ACB56931.1| NBS1 [Aegilops tauschii] gi|171906270|gb|ACB56932... 80 4e-13
gb|ACB56929.1| NBS1 [Triticum monococcum] gi|171906266|gb|ACB569... 80 4e-13
ref|XP_002322496.2| hypothetical protein POPTR_0015s12710g [Popu... 79 6e-13
ref|XP_006847825.1| hypothetical protein AMTR_s00029p00048890 [A... 79 8e-13
ref|XP_004304332.1| PREDICTED: uncharacterized protein LOC101304... 79 8e-13
gb|EOY03071.1| Nijmegen breakage syndrome 1, putative isoform 4 ... 78 1e-12
gb|EOY03070.1| Nijmegen breakage syndrome 1, putative isoform 3 ... 78 1e-12
>ref|XP_003616106.1| Nibrin [Medicago truncatula] gi|355517441|gb|AES99064.1| Nibrin
[Medicago truncatula]
Length = 571
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/78 (56%), Positives = 58/78 (74%)
Frame = -2
Query: 254 ESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPLIL 75
E I +EIPSC S+ PT++++GVS+ VAD + RENCLKGYTFVLES H+YKF +L +L
Sbjct: 194 EKNISNEIPSCHSHIPTVSVEGVSIRVADPKSRENCLKGYTFVLESVHLYKFGDQLNSLL 253
Query: 74 DVGGAKTVSLEFLDSDSQ 21
+V GAKT+ + S SQ
Sbjct: 254 EVAGAKTILFQEFSSHSQ 271
>ref|XP_003544952.1| PREDICTED: nibrin-like isoform X1 [Glycine max]
gi|571511887|ref|XP_006596489.1| PREDICTED: nibrin-like
isoform X2 [Glycine max]
gi|571511894|ref|XP_006596490.1| PREDICTED: nibrin-like
isoform X3 [Glycine max]
Length = 555
Score = 92.4 bits (228), Expect = 6e-17
Identities = 44/78 (56%), Positives = 57/78 (73%)
Frame = -2
Query: 254 ESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPLIL 75
E I EIPSC SY PT++ +G S+ +AD R+RE+CLKGYTF+LES H+YKF +L +L
Sbjct: 194 EKNISTEIPSCHSYIPTVSAEGESIKIADPRMREDCLKGYTFLLESEHLYKFGDQLKPLL 253
Query: 74 DVGGAKTVSLEFLDSDSQ 21
+V GAK VS E S+SQ
Sbjct: 254 EVAGAKVVSSEDFSSNSQ 271
>ref|XP_003518356.1| PREDICTED: nibrin-like [Glycine max]
Length = 526
Score = 92.4 bits (228), Expect = 6e-17
Identities = 44/78 (56%), Positives = 58/78 (74%)
Frame = -2
Query: 254 ESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPLIL 75
+ I EIPSC SY PT++++G S+ +AD R+RE+CLKGYTF+LES H+YKF +L +L
Sbjct: 168 KKNISTEIPSCHSYIPTVSVEGESIKIADPRMREDCLKGYTFLLESEHLYKFGDQLKPLL 227
Query: 74 DVGGAKTVSLEFLDSDSQ 21
+V GAK VS E SDSQ
Sbjct: 228 EVAGAKVVSSEDFCSDSQ 245
>ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853048 [Vitis vinifera]
gi|296083807|emb|CBI24024.3| unnamed protein product
[Vitis vinifera]
Length = 595
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/82 (56%), Positives = 55/82 (67%)
Frame = -2
Query: 254 ESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPLIL 75
E I +EIPSC+ Y PTLT GVSV V D+ RENCLKG TF+LE AH Y F RL +L
Sbjct: 196 EKNIRNEIPSCNDYVPTLTCGGVSVKVGDSISRENCLKGCTFLLEPAHKYNFGDRLQSLL 255
Query: 74 DVGGAKTVSLEFLDSDSQDLQG 9
+ GAK S++ L S SQ L+G
Sbjct: 256 EASGAKVDSIDGLSSRSQGLEG 277
>gb|EMJ02895.1| hypothetical protein PRUPE_ppa004302mg [Prunus persica]
Length = 517
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/80 (53%), Positives = 60/80 (75%)
Frame = -2
Query: 260 LKESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPL 81
L E I E+PSC S+APTLT +GVSV +AD R RENCL+GYTF+L+S +YKF +RL
Sbjct: 193 LAEKNIRTELPSCESFAPTLTFEGVSVKLADPRTRENCLEGYTFLLDSKPVYKFMNRLRS 252
Query: 80 ILDVGGAKTVSLEFLDSDSQ 21
+L+V GAK ++++ + +SQ
Sbjct: 253 LLEVSGAKILTIDGFNLNSQ 272
>gb|ESW13980.1| hypothetical protein PHAVU_008G242800g [Phaseolus vulgaris]
Length = 557
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/78 (55%), Positives = 56/78 (71%)
Frame = -2
Query: 254 ESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPLIL 75
E I EIPSC SY PT+++DG S+ +AD R RE+C+KGYTF+LES H+YKF +L +L
Sbjct: 192 EKNISTEIPSCHSYIPTVSVDGESIKIADPRSREDCMKGYTFLLESEHLYKFRDQLKSLL 251
Query: 74 DVGGAKTVSLEFLDSDSQ 21
+V GAK VS S+SQ
Sbjct: 252 EVAGAKVVSAGDFCSNSQ 269
>ref|XP_004490746.1| PREDICTED: nibrin-like isoform X1 [Cicer arietinum]
gi|502096470|ref|XP_004490747.1| PREDICTED: nibrin-like
isoform X2 [Cicer arietinum]
Length = 547
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 5/84 (5%)
Frame = -2
Query: 254 ESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPLIL 75
+ I +EIPSC S+ T++++G S+ V D + RENCLKGYTFVLES H+YKF +L +L
Sbjct: 186 DKNIGNEIPSCHSHISTVSVEGASIKVVDPKARENCLKGYTFVLESVHLYKFGDQLKSLL 245
Query: 74 DVGGAKTVSLE-----FLDSDSQD 18
+V GAKT+S + LDSD D
Sbjct: 246 EVAGAKTISFQEFSSNILDSDYGD 269
>ref|XP_002525874.1| Nibrin, putative [Ricinus communis] gi|223534788|gb|EEF36478.1|
Nibrin, putative [Ricinus communis]
Length = 529
Score = 87.0 bits (214), Expect = 2e-15
Identities = 45/83 (54%), Positives = 57/83 (68%)
Frame = -2
Query: 263 VLKESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLP 84
++ E I EIPS SSY PTLT++GV V V D+ R NCLKGYTF+LES +MYKF RL
Sbjct: 192 LVAEKGIGSEIPSWSSYVPTLTVEGVPVKVVDSVTRANCLKGYTFLLESLNMYKFGDRLQ 251
Query: 83 LILDVGGAKTVSLEFLDSDSQDL 15
+L+VGGA V +E S ++ L
Sbjct: 252 AMLEVGGANIVFIEEFYSSNEGL 274
>ref|XP_004170596.1| PREDICTED: uncharacterized protein LOC101228661 [Cucumis sativus]
Length = 463
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -2
Query: 239 HEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPLIL-DVGG 63
+EIPS SY PT+T++G+ V V D R+NCL GYTF+L +A YK+ RL ++L VGG
Sbjct: 139 NEIPSFDSYQPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSYKYGDRLKMLLQQVGG 198
Query: 62 AKTVSLEFLDSDSQDL 15
A +S+E SDSQDL
Sbjct: 199 ANVLSIEDFSSDSQDL 214
>ref|XP_004145862.1| PREDICTED: nibrin-like [Cucumis sativus]
Length = 523
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -2
Query: 239 HEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPLIL-DVGG 63
+EIPS SY PT+T++G+ V V D R+NCL GYTF+L +A YK+ RL ++L VGG
Sbjct: 199 NEIPSFDSYQPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSYKYGDRLKMLLQQVGG 258
Query: 62 AKTVSLEFLDSDSQDL 15
A +S+E SDSQDL
Sbjct: 259 ANVLSIEDFSSDSQDL 274
>gb|EMS55326.1| Nibrin [Triticum urartu]
Length = 574
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = -2
Query: 260 LKESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPL 81
+ E I EIPSC+ Y P LTLDG+ + + +N++ ENCL G+TF+L S+ YKF ++
Sbjct: 191 MAEKNIHTEIPSCTQYIPNLTLDGMDIKMVENKLMENCLAGHTFILGSSEKYKFGEKIQE 250
Query: 80 ILDVGGAKTVSLEFLDSDSQD 18
+L+ GAK +S+E ++SQD
Sbjct: 251 LLESTGAKYLSIEEFCANSQD 271
>dbj|BAJ86788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = -2
Query: 260 LKESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPL 81
+ E I EIPSC+ Y P LTLDG+ + + +N++ ENCL G+TF+L S+ YKF ++
Sbjct: 191 MAEKNIHTEIPSCTQYIPNLTLDGMDIKMVENKLMENCLAGHTFILGSSEKYKFGEKIQE 250
Query: 80 ILDVGGAKTVSLEFLDSDSQD 18
+L+ GAK +S+E ++SQD
Sbjct: 251 LLESTGAKYLSIEEFCANSQD 271
>gb|ACB56933.1| NBS1 [Triticum turgidum] gi|171906274|gb|ACB56934.1| NBS1 [Triticum
turgidum]
Length = 574
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = -2
Query: 260 LKESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPL 81
+ E I EIPSC+ Y P LTLDG+ + + +N++ ENCL G+TF+L S+ YKF ++
Sbjct: 191 MAEKNIHTEIPSCTQYIPNLTLDGMDIKMVENKLMENCLAGHTFILGSSEKYKFGEKIQE 250
Query: 80 ILDVGGAKTVSLEFLDSDSQD 18
+L+ GAK +S+E ++SQD
Sbjct: 251 LLESTGAKYLSIEEFCANSQD 271
>gb|ACB56931.1| NBS1 [Aegilops tauschii] gi|171906270|gb|ACB56932.1| NBS1 [Aegilops
tauschii]
Length = 574
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = -2
Query: 260 LKESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPL 81
+ E I EIPSC+ Y P LTLDG+ + + +N++ ENCL G+TF+L S+ YKF ++
Sbjct: 191 MAEKNIHTEIPSCTQYIPNLTLDGMDIKMVENKLMENCLAGHTFILGSSEKYKFGEKIQE 250
Query: 80 ILDVGGAKTVSLEFLDSDSQD 18
+L+ GAK +S+E ++SQD
Sbjct: 251 LLESTGAKYLSIEEFCANSQD 271
>gb|ACB56929.1| NBS1 [Triticum monococcum] gi|171906266|gb|ACB56930.1| NBS1
[Triticum monococcum]
Length = 574
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = -2
Query: 260 LKESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPL 81
+ E I EIPSC+ Y P LTLDG+ + + +N++ ENCL G+TF+L S+ YKF ++
Sbjct: 191 MAEKNIHTEIPSCTQYIPNLTLDGMDIKMVENKLMENCLAGHTFILGSSEKYKFGEKIQE 250
Query: 80 ILDVGGAKTVSLEFLDSDSQD 18
+L+ GAK +S+E ++SQD
Sbjct: 251 LLESTGAKYLSIEEFCANSQD 271
>ref|XP_002322496.2| hypothetical protein POPTR_0015s12710g [Populus trichocarpa]
gi|550322593|gb|EEF06623.2| hypothetical protein
POPTR_0015s12710g [Populus trichocarpa]
Length = 517
Score = 79.0 bits (193), Expect = 6e-13
Identities = 43/83 (51%), Positives = 58/83 (69%)
Frame = -2
Query: 263 VLKESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLP 84
++ E RI EIPS SSY PTLT++GVSV VA + R CL+G+T +LES +MYKF RL
Sbjct: 188 LVAEKRIGLEIPSWSSYIPTLTVEGVSVKVAASGTRAKCLEGFTCLLESINMYKFKDRLQ 247
Query: 83 LILDVGGAKTVSLEFLDSDSQDL 15
+L+V GAK V +E S+++ L
Sbjct: 248 SLLEVCGAKIVLVEEFCSNAKGL 270
>ref|XP_006847825.1| hypothetical protein AMTR_s00029p00048890 [Amborella trichopoda]
gi|548851130|gb|ERN09406.1| hypothetical protein
AMTR_s00029p00048890 [Amborella trichopoda]
Length = 481
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Frame = -2
Query: 254 ESRIIHEIPSCSSYAPTLTLD----GVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRL 87
E ++ +EIPSCS+ PTLTL SV V + VRE+CL GYTFVL S+HMY + RL
Sbjct: 195 EKKVSNEIPSCSTCIPTLTLGEGEHSSSVKVVEPTVRESCLAGYTFVLRSSHMYTYGERL 254
Query: 86 PLILDVGGAKTVSLEFLDSDSQDLQ 12
L+L+V GAK +SL+ +Q L+
Sbjct: 255 RLLLEVVGAKVLSLDSFHFSNQILE 279
>ref|XP_004304332.1| PREDICTED: uncharacterized protein LOC101304895 [Fragaria vesca
subsp. vesca]
Length = 518
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = -2
Query: 260 LKESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPL 81
L E I+ E P + ++PT+T+DG SV +AD R RENCL GY F+L+S +Y+F RL
Sbjct: 194 LAEKNILTEFPCYTPFSPTMTVDGTSVKLADPRSRENCLAGYAFLLDSTLVYRFGDRLQS 253
Query: 80 ILDVGGAKTVSLEFLDSDSQ 21
+L++ GAK + +E S+SQ
Sbjct: 254 LLEISGAKILYVEGFKSNSQ 273
>gb|EOY03071.1| Nijmegen breakage syndrome 1, putative isoform 4 [Theobroma cacao]
Length = 526
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = -2
Query: 254 ESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPLIL 75
E I E+P SS+ PT+ +DGVSV V+D RENCL+GY F+LES +MY F RL +L
Sbjct: 186 EKSIRTELPGYSSHVPTIIVDGVSVEVSDANTRENCLEGYAFLLESTYMYNFGDRLQSLL 245
Query: 74 DVGGAKTVSLEFLDSDSQ 21
+V G+++ +E S SQ
Sbjct: 246 EVSGSRSFCVEDTCSSSQ 263
>gb|EOY03070.1| Nijmegen breakage syndrome 1, putative isoform 3 [Theobroma cacao]
Length = 520
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = -2
Query: 254 ESRIIHEIPSCSSYAPTLTLDGVSVVVADNRVRENCLKGYTFVLESAHMYKFSSRLPLIL 75
E I E+P SS+ PT+ +DGVSV V+D RENCL+GY F+LES +MY F RL +L
Sbjct: 186 EKSIRTELPGYSSHVPTIIVDGVSVEVSDANTRENCLEGYAFLLESTYMYNFGDRLQSLL 245
Query: 74 DVGGAKTVSLEFLDSDSQ 21
+V G+++ +E S SQ
Sbjct: 246 EVSGSRSFCVEDTCSSSQ 263