BLASTX nr result

ID: Rheum21_contig00030705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00030705
         (526 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB89969.1| hypothetical protein L484_023622 [Morus notabilis]      59   9e-07
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    57   3e-06
ref|XP_006473914.1| PREDICTED: uncharacterized protein LOC102629...    56   6e-06

>gb|EXB89969.1| hypothetical protein L484_023622 [Morus notabilis]
          Length = 756

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = -1

Query: 412 IPPDRSRWSPPVAGWYKLNADACVMEGKGS-GLGVCIRDDKGFVVGACTKQLQTRYDPLV 236
           +P  + RW PPVAG +KLN DA V EG  S G+GV IRD  G V     K++   + P +
Sbjct: 171 VPVSKVRWKPPVAGLFKLNTDASVREGTSSIGIGVVIRDGDGIVCACLVKRIAGSFSPFL 230

Query: 235 DETKA 221
            E  A
Sbjct: 231 AECMA 235


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
 Frame = -1

Query: 526 RRNTWVFEGILKEENLVIAGVRGLL---DGINEGKTQKIEKIPPDRSRWSPPVAGWYKLN 356
           RRN  V++G L+  N+ +   R LL          T ++++ P D   W PP AG+ K N
Sbjct: 9   RRNDKVWDGQLQPSNIAVQLARELLFQWQAARNSATTQVQQSPQDTIAWQPPAAGFLKCN 68

Query: 355 ADACVM-EGKGSGLGVCIRDDKGFVVGACT 269
            DA +  E    G G+C+RD +G  + A T
Sbjct: 69  VDAAIFSEQNRFGTGMCVRDQRGRFLKAAT 98


>ref|XP_006473914.1| PREDICTED: uncharacterized protein LOC102629934 [Citrus sinensis]
          Length = 304

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
 Frame = -1

Query: 523 RNTWVFEGILKEENLVIAGVRGLLDGINEGKTQKIEKIPPD----RSRWSPPVAGWYKLN 356
           RN  +F+   ++ +L +A    L+      +  ++ K PP     + +WS P  GW+K+N
Sbjct: 97  RNLAIFKNKREDSHLSVAAAEALVQSYKRIQMPQMSKSPPTSLAIQQKWSYPPEGWFKVN 156

Query: 355 ADACV-MEGKGSGLGVCIRDDKGFVVGACTK 266
            DA V ME + +GLG+ IR+ +G V+ A  K
Sbjct: 157 VDAAVKMEQQRTGLGIVIRNSEGKVMAAAMK 187


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