BLASTX nr result
ID: Rheum21_contig00030500
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00030500
(276 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006494026.1| PREDICTED: uncharacterized protein LOC102613... 172 4e-41
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 171 9e-41
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 171 1e-40
emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group] 171 1e-40
ref|XP_004980298.1| PREDICTED: uncharacterized protein LOC101759... 170 2e-40
emb|CAE01890.2| OSJNBa0035O13.13 [Oryza sativa Japonica Group] 170 2e-40
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 169 3e-40
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624... 169 3e-40
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 169 3e-40
ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772... 169 4e-40
ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752... 169 4e-40
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 169 4e-40
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 169 4e-40
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 169 4e-40
emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group] gi... 169 4e-40
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 169 4e-40
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 168 6e-40
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 167 1e-39
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 167 1e-39
gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subc... 166 2e-39
>ref|XP_006494026.1| PREDICTED: uncharacterized protein LOC102613249 [Citrus sinensis]
Length = 559
Score = 172 bits (436), Expect = 4e-41
Identities = 78/92 (84%), Positives = 90/92 (97%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKELQRQV+ELL +GYVRES+SPCAVPV+LVPKKDG+WRMCVDCRAIN+ITVKY+HPI
Sbjct: 361 EETKELQRQVEELLAKGYVRESMSPCAVPVLLVPKKDGTWRMCVDCRAINKITVKYRHPI 420
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQE 276
PRLDDMLDELHG+ +FSKIDLKSGYHQIR++E
Sbjct: 421 PRLDDMLDELHGSCVFSKIDLKSGYHQIRIRE 452
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 171 bits (433), Expect = 9e-41
Identities = 77/91 (84%), Positives = 88/91 (96%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQVQELLD+GYVRESLSPCAVPVILVPKKDG+WRMCVDCRAIN IT++Y+HPI
Sbjct: 732 EETKEIQRQVQELLDKGYVRESLSPCAVPVILVPKKDGTWRMCVDCRAINNITIRYRHPI 791
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL GA +FSK+DL+SGYHQIRM+
Sbjct: 792 PRLDDMLDELSGAIVFSKVDLRSGYHQIRMK 822
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 171 bits (432), Expect = 1e-40
Identities = 76/91 (83%), Positives = 89/91 (97%)
Frame = +1
Query: 4 ETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPIP 183
ETKEL++QV EL++RG++RES+SPCAVPV+LVPKKDGSWRMCVDCRAIN ITVKY+HPIP
Sbjct: 922 ETKELEKQVTELMERGHIRESMSPCAVPVLLVPKKDGSWRMCVDCRAINNITVKYRHPIP 981
Query: 184 RLDDMLDELHGATIFSKIDLKSGYHQIRMQE 276
RLDDMLDELHG++IFSK+DLKSGYHQIRM+E
Sbjct: 982 RLDDMLDELHGSSIFSKVDLKSGYHQIRMKE 1012
>emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]
Length = 1239
Score = 171 bits (432), Expect = 1e-40
Identities = 77/91 (84%), Positives = 88/91 (96%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQVQELLD+GYVRESLSPCAVPV+LVPKKDGSWRMCVDCRAIN IT++Y+HPI
Sbjct: 535 EETKEIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPI 594
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+ +FSKIDL+SGYHQIRM+
Sbjct: 595 PRLDDMLDELSGSLVFSKIDLRSGYHQIRMK 625
>ref|XP_004980298.1| PREDICTED: uncharacterized protein LOC101759439 [Setaria italica]
Length = 696
Score = 170 bits (431), Expect = 2e-40
Identities = 76/91 (83%), Positives = 88/91 (96%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQVQELLD+GYVRESLSPCAVPV+LVPKKDGSWRMCVDCRAIN IT++Y+HPI
Sbjct: 364 EETKEIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPI 423
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+ +FSKIDL+SGYHQ+RM+
Sbjct: 424 PRLDDMLDELSGSIVFSKIDLRSGYHQVRMK 454
>emb|CAE01890.2| OSJNBa0035O13.13 [Oryza sativa Japonica Group]
Length = 1021
Score = 170 bits (430), Expect = 2e-40
Identities = 77/90 (85%), Positives = 87/90 (96%)
Frame = +1
Query: 4 ETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPIP 183
ETKE+QRQVQELLD+GYVRESLSPCAVPV+LVPKKDGSWRMCVDCRAIN IT++Y+HPIP
Sbjct: 536 ETKEIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIP 595
Query: 184 RLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
RLDDMLDEL G+ +FSKIDL+SGYHQIRM+
Sbjct: 596 RLDDMLDELSGSLVFSKIDLRSGYHQIRMK 625
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 169 bits (429), Expect = 3e-40
Identities = 76/91 (83%), Positives = 88/91 (96%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQVQELLD+GYVRESLSPC+VPV+LVPKKDGSWRMCVDCRAIN IT++Y+HPI
Sbjct: 757 EETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPI 816
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+ +FSKIDL+SGYHQIRM+
Sbjct: 817 PRLDDMLDELSGSLVFSKIDLRSGYHQIRMK 847
>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
Length = 1083
Score = 169 bits (429), Expect = 3e-40
Identities = 76/92 (82%), Positives = 89/92 (96%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKELQRQV+ELL +GY RES+SPCAVPV+LVPKKDG+WRMCVDCRAIN+ITVKY+HP+
Sbjct: 648 EETKELQRQVEELLAKGYARESMSPCAVPVLLVPKKDGTWRMCVDCRAINKITVKYRHPM 707
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQE 276
PRLDDMLDELHG+ +FSKIDLKSGYHQIR++E
Sbjct: 708 PRLDDMLDELHGSCVFSKIDLKSGYHQIRIRE 739
Score = 111 bits (277), Expect = 1e-22
Identities = 47/58 (81%), Positives = 57/58 (98%)
Frame = +1
Query: 103 KKDGSWRMCVDCRAINQITVKYKHPIPRLDDMLDELHGATIFSKIDLKSGYHQIRMQE 276
++DG+WRMCVDCRAIN+ITVKY+HP+PRLDDMLDELHG+ +FSKIDLKSGYHQIR++E
Sbjct: 463 RQDGTWRMCVDCRAINKITVKYRHPMPRLDDMLDELHGSCVFSKIDLKSGYHQIRIRE 520
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 169 bits (429), Expect = 3e-40
Identities = 76/91 (83%), Positives = 88/91 (96%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQVQELLD+GYVRESLSPC+VPV+LVPKKDGSWRMCVDCRAIN IT++Y+HPI
Sbjct: 757 EETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPI 816
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+ +FSKIDL+SGYHQIRM+
Sbjct: 817 PRLDDMLDELSGSLVFSKIDLRSGYHQIRMK 847
>ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772114 [Setaria italica]
Length = 1246
Score = 169 bits (428), Expect = 4e-40
Identities = 77/91 (84%), Positives = 89/91 (97%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+Q+QV+ELLD+GYVRESLSPCAVPV+LVPKKDGSWRMCVDCRAIN ITV+Y+HPI
Sbjct: 675 EETKEIQQQVKELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINAITVRYRHPI 734
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+TIF+KIDL+SGYHQIRM+
Sbjct: 735 PRLDDMLDELSGSTIFTKIDLRSGYHQIRMK 765
>ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752491 [Setaria italica]
Length = 1295
Score = 169 bits (428), Expect = 4e-40
Identities = 77/91 (84%), Positives = 89/91 (97%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+Q+QV+ELLD+GYVRESLSPCAVPV+LVPKKDGSWRMCVDCRAIN ITV+Y+HPI
Sbjct: 798 EETKEIQQQVKELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINAITVRYRHPI 857
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+TIF+KIDL+SGYHQIRM+
Sbjct: 858 PRLDDMLDELSGSTIFTKIDLRSGYHQIRMK 888
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 169 bits (428), Expect = 4e-40
Identities = 76/91 (83%), Positives = 87/91 (95%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQV ELLD+GYVRESLSPCAVPVILVPKKDGSWRMCVDCRAIN IT++Y+HPI
Sbjct: 1062 EETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPI 1121
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+ +FSK+DL+SGYHQIRM+
Sbjct: 1122 PRLDDMLDELSGSIVFSKVDLRSGYHQIRMK 1152
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 169 bits (428), Expect = 4e-40
Identities = 76/91 (83%), Positives = 87/91 (95%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQV ELLD+GYVRESLSPCAVPVILVPKKDGSWRMCVDCRAIN IT++Y+HPI
Sbjct: 729 EETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPI 788
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+ +FSK+DL+SGYHQIRM+
Sbjct: 789 PRLDDMLDELSGSIVFSKVDLRSGYHQIRMK 819
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 169 bits (428), Expect = 4e-40
Identities = 75/91 (82%), Positives = 88/91 (96%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQVQELLD+GYVRESLSPC++PV+LVPKKDGSWRMCVDCRAIN IT++Y+HPI
Sbjct: 757 EETKEIQRQVQELLDKGYVRESLSPCSIPVLLVPKKDGSWRMCVDCRAINNITIRYRHPI 816
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+ +FSKIDL+SGYHQIRM+
Sbjct: 817 PRLDDMLDELSGSLVFSKIDLRSGYHQIRMK 847
>emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group]
gi|38345441|emb|CAE03293.2| OSJNBb0046P18.9 [Oryza sativa
Japonica Group]
Length = 1134
Score = 169 bits (428), Expect = 4e-40
Identities = 76/91 (83%), Positives = 87/91 (95%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQV ELLD+GYVRESLSPCAVPVILVPKKDGSWRMCVDCRAIN IT++Y+HPI
Sbjct: 912 EETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPI 971
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+ +FSK+DL+SGYHQIRM+
Sbjct: 972 PRLDDMLDELSGSIVFSKVDLRSGYHQIRMK 1002
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 169 bits (428), Expect = 4e-40
Identities = 76/91 (83%), Positives = 87/91 (95%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQV ELLD+GYVRESLSPCAVPVILVPKKDGSWRMCVDCRAIN IT++Y+HPI
Sbjct: 1071 EETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPI 1130
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+ +FSK+DL+SGYHQIRM+
Sbjct: 1131 PRLDDMLDELSGSIVFSKVDLRSGYHQIRMK 1161
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 168 bits (426), Expect = 6e-40
Identities = 78/91 (85%), Positives = 87/91 (95%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQVQ LLD+GYVRESLSPCAVPVILVPKKDGSWRMCVDCRAIN ITV+Y+HPI
Sbjct: 732 EETKEIQRQVQALLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITVRYRHPI 791
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+ IFSKIDL+SG+HQIRM+
Sbjct: 792 PRLDDMLDELSGSMIFSKIDLRSGFHQIRMK 822
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 167 bits (424), Expect = 1e-39
Identities = 75/91 (82%), Positives = 87/91 (95%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQVQELLD+GYVRESLSPC+VPV+LVPKKDGSWRMCVDCRAIN IT++Y+HPI
Sbjct: 70 EETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPI 129
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+ +F KIDL+SGYHQIRM+
Sbjct: 130 PRLDDMLDELSGSLVFCKIDLRSGYHQIRMK 160
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 167 bits (424), Expect = 1e-39
Identities = 76/91 (83%), Positives = 87/91 (95%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQVQELLD+GYVRESLSPC+VPV+LVPKKDGSWRMCVDCRAIN IT++Y+HPI
Sbjct: 653 EETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPI 712
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+ +FSKIDL SGYHQIRM+
Sbjct: 713 PRLDDMLDELSGSLVFSKIDLCSGYHQIRMK 743
>gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1392
Score = 166 bits (421), Expect = 2e-39
Identities = 75/91 (82%), Positives = 87/91 (95%)
Frame = +1
Query: 1 DETKELQRQVQELLDRGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYKHPI 180
+ETKE+QRQVQELLD+GYVRESLSPCAVPV+LVPKKDGSWRMCVDCRAI+ I ++Y+HPI
Sbjct: 606 EETKEIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAIDNIIIRYRHPI 665
Query: 181 PRLDDMLDELHGATIFSKIDLKSGYHQIRMQ 273
PRLDDMLDEL G+ +FSKIDL+SGYHQIRM+
Sbjct: 666 PRLDDMLDELSGSLVFSKIDLRSGYHQIRMK 696