BLASTX nr result

ID: Rheum21_contig00030481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00030481
         (377 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004488205.1| PREDICTED: vacuolar protein sorting-associat...    77   3e-12
ref|XP_002317065.1| SNF7 family protein [Populus trichocarpa] gi...    76   4e-12
ref|XP_003533829.1| PREDICTED: vacuolar protein sorting-associat...    76   5e-12
ref|XP_003546560.1| PREDICTED: vacuolar protein sorting-associat...    75   7e-12
gb|ACJ84167.1| unknown [Medicago truncatula] gi|388514703|gb|AFK...    75   9e-12
ref|XP_006353033.1| PREDICTED: vacuolar protein sorting-associat...    74   2e-11
gb|EOY25559.1| SNF7 family protein isoform 3 [Theobroma cacao]         74   2e-11
gb|EOY25558.1| Vacuolar protein sorting-associated protein 2 iso...    74   2e-11
gb|EOY25557.1| SNF7 family protein isoform 1 [Theobroma cacao]         74   2e-11
gb|AFK49044.1| unknown [Lotus japonicus]                               74   2e-11
emb|CBI39020.3| unnamed protein product [Vitis vinifera]               74   3e-11
ref|XP_002277559.1| PREDICTED: vacuolar protein sorting-associat...    74   3e-11
emb|CAN62571.1| hypothetical protein VITISV_021320 [Vitis vinifera]    74   3e-11
ref|XP_004173751.1| PREDICTED: vacuolar protein sorting-associat...    71   2e-10
ref|XP_004134888.1| PREDICTED: vacuolar protein sorting-associat...    71   2e-10
ref|XP_006468389.1| PREDICTED: vacuolar protein sorting-associat...    69   5e-10
ref|XP_006448807.1| hypothetical protein CICLE_v10016601mg [Citr...    69   5e-10
ref|XP_006398069.1| hypothetical protein EUTSA_v10001015mg [Eutr...    69   8e-10
ref|XP_004293699.1| PREDICTED: vacuolar protein sorting-associat...    69   8e-10
ref|NP_199269.1| vacuolar protein sorting-associated protein 2-2...    69   8e-10

>ref|XP_004488205.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           2-like [Cicer arietinum]
          Length = 216

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 40/53 (75%), Positives = 47/53 (88%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRIA++  + VA P+ ES DVE+LEKRLASLRRI
Sbjct: 165 QVLDEIGVDIASQLSSAPKGRIASRNTENVA-PRAESQDVEELEKRLASLRRI 216


>ref|XP_002317065.1| SNF7 family protein [Populus trichocarpa]
           gi|222860130|gb|EEE97677.1| SNF7 family protein [Populus
           trichocarpa]
          Length = 212

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 40/53 (75%), Positives = 45/53 (84%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRIA+K     A   PES++VEDLEKRLASLRRI
Sbjct: 160 QVLDEIGVDIASQLSSAPKGRIASKNAPPNAVTSPESTNVEDLEKRLASLRRI 212


>ref|XP_003533829.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           2-like [Glycine max]
          Length = 219

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 39/53 (73%), Positives = 45/53 (84%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRIA++  + VA    ES DVE+LEKRLASLRRI
Sbjct: 167 QVLDEIGVDIASQLSSAPKGRIASRNTENVAPRPAESQDVEELEKRLASLRRI 219


>ref|XP_003546560.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           2-like [Glycine max]
          Length = 217

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 40/53 (75%), Positives = 44/53 (83%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRIA+   + VA    ES DVEDLEKRLASLRRI
Sbjct: 165 QVLDEIGVDIASQLSSAPKGRIASINTENVAPRPAESQDVEDLEKRLASLRRI 217


>gb|ACJ84167.1| unknown [Medicago truncatula] gi|388514703|gb|AFK45413.1| unknown
           [Medicago truncatula]
          Length = 216

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 39/53 (73%), Positives = 46/53 (86%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRIA++  +  A P+ ES DVE+LEKRLASLRRI
Sbjct: 165 QVLDEIGVDIASQLSSAPKGRIASRNAENAA-PRSESQDVEELEKRLASLRRI 216


>ref|XP_006353033.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           2-like [Solanum tuberosum]
          Length = 222

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 39/54 (72%), Positives = 48/54 (88%), Gaps = 1/54 (1%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTVANPKPE-SSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRIA+K+ + VA P  + ++DVE+LEKRLASLRRI
Sbjct: 169 QVLDEIGVDIASQLSSAPKGRIASKKVENVAPPSSDTAADVEELEKRLASLRRI 222


>gb|EOY25559.1| SNF7 family protein isoform 3 [Theobroma cacao]
          Length = 217

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/53 (69%), Positives = 45/53 (84%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRIA++      N + ES+DV++LEKRLASLRRI
Sbjct: 165 QVLDEIGVDIASQLSSAPKGRIASRNAAPEVNARSESTDVDELEKRLASLRRI 217


>gb|EOY25558.1| Vacuolar protein sorting-associated protein 2 isoform 2 [Theobroma
           cacao]
          Length = 177

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/53 (69%), Positives = 45/53 (84%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRIA++      N + ES+DV++LEKRLASLRRI
Sbjct: 125 QVLDEIGVDIASQLSSAPKGRIASRNAAPEVNARSESTDVDELEKRLASLRRI 177


>gb|EOY25557.1| SNF7 family protein isoform 1 [Theobroma cacao]
          Length = 217

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/53 (69%), Positives = 45/53 (84%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRIA++      N + ES+DV++LEKRLASLRRI
Sbjct: 165 QVLDEIGVDIASQLSSAPKGRIASRNAAPEVNARSESTDVDELEKRLASLRRI 217


>gb|AFK49044.1| unknown [Lotus japonicus]
          Length = 219

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 38/53 (71%), Positives = 44/53 (83%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQ S+APKGRI ++  + VA    ES+DVEDLEKRLASLRRI
Sbjct: 167 QVLDEIGVDIASQSSSAPKGRIGSRSAENVAPRPAESNDVEDLEKRLASLRRI 219


>emb|CBI39020.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/53 (73%), Positives = 45/53 (84%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRI +K+ + V  P  ES DVE+LEKRLASLRRI
Sbjct: 164 QVLDEIGVDIASQLSSAPKGRIGSKKVENVV-PSSESPDVEELEKRLASLRRI 215


>ref|XP_002277559.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           2-like [Vitis vinifera]
          Length = 216

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/53 (73%), Positives = 45/53 (84%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRI +K+ + V  P  ES DVE+LEKRLASLRRI
Sbjct: 165 QVLDEIGVDIASQLSSAPKGRIGSKKVENVV-PSSESPDVEELEKRLASLRRI 216


>emb|CAN62571.1| hypothetical protein VITISV_021320 [Vitis vinifera]
          Length = 266

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/53 (73%), Positives = 45/53 (84%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRI +K+ + V  P  ES DVE+LEKRLASLRRI
Sbjct: 215 QVLDEIGVDIASQLSSAPKGRIGSKKVENVV-PSSESPDVEELEKRLASLRRI 266


>ref|XP_004173751.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           2-like [Cucumis sativus]
          Length = 76

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 1/53 (1%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIAT-KQQQTVANPKPESSDVEDLEKRLASLRR 158
           QVLDEIGVD+ASQLS+APKGRIA  K + TVA+   ES DVEDLEKRLASLRR
Sbjct: 25  QVLDEIGVDIASQLSSAPKGRIAARKTENTVAS--SESPDVEDLEKRLASLRR 75


>ref|XP_004134888.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           2-like [Cucumis sativus]
          Length = 410

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 1/53 (1%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIAT-KQQQTVANPKPESSDVEDLEKRLASLRR 158
           QVLDEIGVD+ASQLS+APKGRIA  K + TVA+   ES DVEDLEKRLASLRR
Sbjct: 167 QVLDEIGVDIASQLSSAPKGRIAARKTENTVAS--SESPDVEDLEKRLASLRR 217


>ref|XP_006468389.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           2-like [Citrus sinensis]
          Length = 244

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/59 (64%), Positives = 43/59 (72%), Gaps = 6/59 (10%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTV------ANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRIA++            N   ES+DVEDLEKR ASLRRI
Sbjct: 186 QVLDEIGVDIASQLSSAPKGRIASRNAPNAVANAPKTNTSSESADVEDLEKRFASLRRI 244


>ref|XP_006448807.1| hypothetical protein CICLE_v10016601mg [Citrus clementina]
           gi|557551418|gb|ESR62047.1| hypothetical protein
           CICLE_v10016601mg [Citrus clementina]
          Length = 223

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/59 (64%), Positives = 43/59 (72%), Gaps = 6/59 (10%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTV------ANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGVD+ASQLS+APKGRIA++            N   ES+DVEDLEKR ASLRRI
Sbjct: 165 QVLDEIGVDIASQLSSAPKGRIASRNAPNAVANAPKTNTSAESADVEDLEKRFASLRRI 223


>ref|XP_006398069.1| hypothetical protein EUTSA_v10001015mg [Eutrema salsugineum]
           gi|557099158|gb|ESQ39522.1| hypothetical protein
           EUTSA_v10001015mg [Eutrema salsugineum]
          Length = 222

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 39/58 (67%), Positives = 43/58 (74%), Gaps = 5/58 (8%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQ-----QQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGV VASQLS+APKGRIATK           N   ESS+V++LEKRLASLRRI
Sbjct: 165 QVLDEIGVGVASQLSSAPKGRIATKSAAPPASTATTNNSSESSEVDELEKRLASLRRI 222


>ref|XP_004293699.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           2-like [Fragaria vesca subsp. vesca]
          Length = 227

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 8/61 (13%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATKQQQTV-----ANPKPESS---DVEDLEKRLASLRR 158
           QVLDEIGVD+ASQLS+APKG+I ++  + V     AN  P+SS   DVEDLEKRLASLRR
Sbjct: 167 QVLDEIGVDIASQLSSAPKGKIGSRNGENVAPRNAANVVPKSSESPDVEDLEKRLASLRR 226

Query: 159 I 161
           I
Sbjct: 227 I 227


>ref|NP_199269.1| vacuolar protein sorting-associated protein 2-2 [Arabidopsis
           thaliana] gi|226698193|sp|Q0WTY4.2|VPS2B_ARATH RecName:
           Full=Vacuolar protein sorting-associated protein 2
           homolog 2; Short=AtVPS2-2; AltName: Full=Charged
           multivesicular body protein 2 homolog 2; AltName:
           Full=ESCRT-III complex subunit VPS2 homolog 2
           gi|332007740|gb|AED95123.1| vacuolar protein
           sorting-associated protein 2-2 [Arabidopsis thaliana]
          Length = 222

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 39/58 (67%), Positives = 43/58 (74%), Gaps = 5/58 (8%)
 Frame = +3

Query: 3   QVLDEIGVDVASQLSAAPKGRIATK-----QQQTVANPKPESSDVEDLEKRLASLRRI 161
           QVLDEIGV VASQLS+APKGRIATK           N   ESS+V++LEKRLASLRRI
Sbjct: 165 QVLDEIGVGVASQLSSAPKGRIATKTAAPPASTAATNKNSESSEVDELEKRLASLRRI 222


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