BLASTX nr result

ID: Rheum21_contig00030362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00030362
         (291 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314851.1| zinc finger family protein [Populus trichoca...    75   1e-11

>ref|XP_002314851.1| zinc finger family protein [Populus trichocarpa]
           gi|222863891|gb|EEF01022.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 247

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 45/104 (43%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
 Frame = -3

Query: 289 WVYMPRAVQPLHVSHGCIFPXXXXXXXXXXXXAPDIM-----SATASYHHLYXXXXXXXX 125
           WVY+PRA  P HVSHGC+FP              D +     S +AS  H          
Sbjct: 147 WVYLPRAATPFHVSHGCVFPSGVSGRGGGGLPYGDSVGDFGFSTSASGPH-------QQL 199

Query: 124 XQRLEVSSTGKGHGGPTSLGRFS---NGPTFDDSVGLDLHLSLA 2
             R   SS    H GPTSL RFS   +GP FD+ +GLDLHLSLA
Sbjct: 200 QSRAHFSSVVDDHSGPTSLSRFSEGDDGPNFDEKLGLDLHLSLA 243


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