BLASTX nr result
ID: Rheum21_contig00030203
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00030203
(255 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 106 3e-21
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta... 105 6e-21
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 103 2e-20
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624... 103 3e-20
ref|XP_006482658.1| PREDICTED: cytochrome P450 89A2-like [Citrus... 103 3e-20
gb|EEC84864.1| hypothetical protein OsI_31997 [Oryza sativa Indi... 101 1e-19
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 100 2e-19
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 100 2e-19
pir||S65815 RNA-directed DNA polymerase (EC 2.7.7.49) (clone NIN... 100 3e-19
gb|AAB48350.1| reverse transcriptase, partial [Arabidopsis thali... 100 3e-19
gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japo... 99 4e-19
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea] 99 6e-19
gb|EEE54705.1| hypothetical protein OsJ_02026 [Oryza sativa Japo... 99 6e-19
gb|EPS64876.1| hypothetical protein M569_09903, partial [Genlise... 99 8e-19
gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indi... 98 1e-18
gb|EOX94469.1| Uncharacterized protein TCM_004053 [Theobroma cacao] 97 2e-18
gb|AFK46250.1| unknown [Lotus japonicus] 97 2e-18
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo... 97 2e-18
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 97 2e-18
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 97 2e-18
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 106 bits (265), Expect = 3e-21
Identities = 51/81 (62%), Positives = 63/81 (77%)
Frame = -3
Query: 247 NATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPGR 68
N L+ LI+KV+ PE I QF P+SLCNVL+KIITK++V R++ ++S LIGP Q SF+PGR
Sbjct: 349 NDALLVLIAKVAKPERIQQFRPVSLCNVLFKIITKMMVTRLKNVISKLIGPAQASFIPGR 408
Query: 67 LITDNIVLAQEVVHSMRHNKG 5
L DNIVL QE VHSMR KG
Sbjct: 409 LSIDNIVLVQEAVHSMRRKKG 429
>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 970
Score = 105 bits (262), Expect = 6e-21
Identities = 50/81 (61%), Positives = 64/81 (79%)
Frame = -3
Query: 247 NATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPGR 68
N L+ LI+KV+ PE I+QF P+SLCNVL+KIITK++VNR++ ++ LIGP Q +F+PGR
Sbjct: 199 NDALLVLIAKVAKPERITQFRPMSLCNVLFKIITKMIVNRLKKVILKLIGPAQANFIPGR 258
Query: 67 LITDNIVLAQEVVHSMRHNKG 5
L DNIVL QE VHSMR KG
Sbjct: 259 LSIDNIVLVQEAVHSMRRKKG 279
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 103 bits (257), Expect = 2e-20
Identities = 49/81 (60%), Positives = 64/81 (79%)
Frame = -3
Query: 247 NATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPGR 68
N L+ L++KV+ PE I+QF P+SLCNVL+KIITK++V R++ ++S LIGP Q SF+PGR
Sbjct: 301 NDVLLVLLAKVAKPERITQFRPVSLCNVLFKIITKMMVIRLKNVISKLIGPAQASFIPGR 360
Query: 67 LITDNIVLAQEVVHSMRHNKG 5
L DNIV+ QE VHSMR KG
Sbjct: 361 LSFDNIVVVQEAVHSMRRKKG 381
>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
Length = 1635
Score = 103 bits (256), Expect = 3e-20
Identities = 46/83 (55%), Positives = 63/83 (75%)
Frame = -3
Query: 253 DLNATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLP 74
++N T++ LI K+ P S + PISLC V+YK ITK++ NR+Q LL +LIGP Q SF+P
Sbjct: 980 EVNRTVLVLIPKIEQPTSFSMYRPISLCTVMYKTITKIIANRLQELLPELIGPHQTSFVP 1039
Query: 73 GRLITDNIVLAQEVVHSMRHNKG 5
GR IT+NI++AQE++HSMR KG
Sbjct: 1040 GRHITENIIVAQEIIHSMRRKKG 1062
>ref|XP_006482658.1| PREDICTED: cytochrome P450 89A2-like [Citrus sinensis]
Length = 809
Score = 103 bits (256), Expect = 3e-20
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = -3
Query: 253 DLNATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLP 74
D+N TL+ LI KV HP + + PISLC V YK I+K++ NR+Q L+ LIGP Q SF+P
Sbjct: 725 DINTTLLVLIPKVDHPVNLKMYRPISLCTVAYKTISKIVANRLQALMPILIGPQQTSFVP 784
Query: 73 GRLITDNIVLAQEVVHSMRHNKG 5
GR ITDNIV+AQEV+HSMR G
Sbjct: 785 GRHITDNIVIAQEVIHSMRKKAG 807
>gb|EEC84864.1| hypothetical protein OsI_31997 [Oryza sativa Indica Group]
Length = 401
Score = 101 bits (251), Expect = 1e-19
Identities = 47/81 (58%), Positives = 63/81 (77%)
Frame = -3
Query: 250 LNATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPG 71
+NAT I LISKV+ P + +F PISLCNV+YKI++K LVNR++P+L DLI Q +F+PG
Sbjct: 5 INATAIVLISKVNRPMELKEFRPISLCNVIYKIVSKCLVNRLRPILDDLISQNQSAFVPG 64
Query: 70 RLITDNIVLAQEVVHSMRHNK 8
R+ITDN +LA E HS++ NK
Sbjct: 65 RMITDNALLAFECFHSIQRNK 85
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 100 bits (249), Expect = 2e-19
Identities = 40/82 (48%), Positives = 64/82 (78%)
Frame = -3
Query: 250 LNATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPG 71
LN T I+LI K + P+ +++F PISLCNV+Y+I+ K + NR++P+LS +I PTQ +F+P
Sbjct: 462 LNHTFIALIPKTTKPKKVTEFRPISLCNVIYRIVAKTIANRLKPILSQIISPTQSAFIPN 521
Query: 70 RLITDNIVLAQEVVHSMRHNKG 5
RLI+DN+++ E +H +RH++G
Sbjct: 522 RLISDNVIIGYECLHKIRHSQG 543
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 100 bits (249), Expect = 2e-19
Identities = 44/81 (54%), Positives = 61/81 (75%)
Frame = -3
Query: 247 NATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPGR 68
N T I LI K+ P+L F PI LCN++YKI+TKV++NR++P+L LI PTQ SF+P R
Sbjct: 492 NDTFIVLIPKMDIPQLAKHFRPIGLCNIVYKIVTKVIINRLKPILPSLISPTQCSFVPNR 551
Query: 67 LITDNIVLAQEVVHSMRHNKG 5
ITDN+++ QE+ HSMR+ +G
Sbjct: 552 QITDNVIIVQEMFHSMRNKQG 572
>pir||S65815 RNA-directed DNA polymerase (EC 2.7.7.49) (clone NING13) -
Arabidopsis thaliana retrotransposon Ta28 (fragment)
Length = 183
Score = 100 bits (248), Expect = 3e-19
Identities = 49/81 (60%), Positives = 59/81 (72%)
Frame = -3
Query: 247 NATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPGR 68
N L++LI KV PE I+QF ISLCNVL+K ITK +V RM+ ++ LIGP Q SF+PGR
Sbjct: 35 NDVLVALIPKVLKPEKITQFRAISLCNVLFKAITKTMVGRMKGVMQKLIGPAQSSFIPGR 94
Query: 67 LITDNIVLAQEVVHSMRHNKG 5
L TDNIV+ QE VH MR KG
Sbjct: 95 LSTDNIVVVQEAVHPMRKKKG 115
>gb|AAB48350.1| reverse transcriptase, partial [Arabidopsis thaliana]
Length = 198
Score = 100 bits (248), Expect = 3e-19
Identities = 49/81 (60%), Positives = 59/81 (72%)
Frame = -3
Query: 247 NATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPGR 68
N L++LI KV PE I+QF ISLCNVL+K ITK +V RM+ ++ LIGP Q SF+PGR
Sbjct: 41 NDVLVALIPKVLKPEKITQFRAISLCNVLFKAITKTMVGRMKGVMQKLIGPAQSSFIPGR 100
Query: 67 LITDNIVLAQEVVHSMRHNKG 5
L TDNIV+ QE VH MR KG
Sbjct: 101 LSTDNIVVVQEAVHPMRKKKG 121
>gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japonica Group]
Length = 469
Score = 99.4 bits (246), Expect = 4e-19
Identities = 46/81 (56%), Positives = 62/81 (76%)
Frame = -3
Query: 250 LNATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPG 71
+NAT I LI KV+ P + +F PISLCNV+YKI++K LVNR++P+L DLI Q +F+PG
Sbjct: 167 INATAIVLIPKVNQPMELKEFRPISLCNVIYKIVSKCLVNRLRPILDDLISQNQSAFVPG 226
Query: 70 RLITDNIVLAQEVVHSMRHNK 8
R+ITDN +LA E HS++ NK
Sbjct: 227 RMITDNALLAFECFHSIQRNK 247
>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 1613
Score = 99.0 bits (245), Expect = 6e-19
Identities = 46/78 (58%), Positives = 60/78 (76%)
Frame = -3
Query: 241 TLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPGRLI 62
TL+ LI KV P + F PISLCNV+YKIITKVLVNR++P L++++GP QG F+PGR
Sbjct: 890 TLLVLIPKVESPVSMKDFRPISLCNVVYKIITKVLVNRLRPHLAEIVGPLQGGFIPGRGT 949
Query: 61 TDNIVLAQEVVHSMRHNK 8
DNI++AQEV+H M+ K
Sbjct: 950 PDNIIIAQEVLHFMKKTK 967
>gb|EEE54705.1| hypothetical protein OsJ_02026 [Oryza sativa Japonica Group]
Length = 644
Score = 99.0 bits (245), Expect = 6e-19
Identities = 44/81 (54%), Positives = 64/81 (79%)
Frame = -3
Query: 253 DLNATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLP 74
++N T I LI KV PE + +F PISLCNV+YK+I+K LVNR++PLLSD+I TQ +F+P
Sbjct: 4 EVNNTSIVLIPKVKQPENLKEFRPISLCNVIYKVISKCLVNRLRPLLSDIISSTQSAFIP 63
Query: 73 GRLITDNIVLAQEVVHSMRHN 11
R+ITDN+++A E +H+++ N
Sbjct: 64 ERMITDNVLIAFESIHAIQRN 84
>gb|EPS64876.1| hypothetical protein M569_09903, partial [Genlisea aurea]
Length = 842
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/84 (54%), Positives = 62/84 (73%)
Frame = -3
Query: 253 DLNATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLP 74
DLN T I LI KVS PE + QF PISLCNVLYKI +K++ NR++P++ LI Q +FLP
Sbjct: 331 DLNHTHIILIPKVSRPEAVHQFRPISLCNVLYKIASKMVANRLKPIMDSLITEEQSAFLP 390
Query: 73 GRLITDNIVLAQEVVHSMRHNKGA 2
GR I DN+++A E+ HS+R N+ +
Sbjct: 391 GRAIADNVLMAFEINHSLRRNQSS 414
>gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indica Group]
Length = 1300
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/82 (53%), Positives = 61/82 (74%)
Frame = -3
Query: 253 DLNATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLP 74
D+N T I LI KV+ P + F PISLCNVLYK+++K LVNRM+P+L +++ P Q +F+P
Sbjct: 405 DVNETTIVLIPKVAQPSQLKDFRPISLCNVLYKVVSKCLVNRMRPILDEVVSPNQSAFVP 464
Query: 73 GRLITDNIVLAQEVVHSMRHNK 8
GRLITDN +LA E H ++ N+
Sbjct: 465 GRLITDNALLAFECFHFIQKNR 486
>gb|EOX94469.1| Uncharacterized protein TCM_004053 [Theobroma cacao]
Length = 359
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = -3
Query: 253 DLNATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLP 74
D+N TLI LI K++ E I QF PI+LCNVLYKI +KVL NR++P+L+ +I Q +F+P
Sbjct: 233 DINHTLIVLIPKIAQVEQIFQFRPINLCNVLYKITSKVLTNRIKPILNQVIADNQSAFVP 292
Query: 73 GRLITDNIVLAQEVVHSMRHNK 8
GRLI DNI++A E++H + HNK
Sbjct: 293 GRLILDNIIVAHEIIHHL-HNK 313
>gb|AFK46250.1| unknown [Lotus japonicus]
Length = 166
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/77 (58%), Positives = 63/77 (81%)
Frame = -3
Query: 238 LISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPGRLIT 59
L+ LI KV +P +++ PISLCNV YK+ITKVLVNR++PLLS+L+GP QGSF+ GR +
Sbjct: 80 LLVLIPKVDNPSHLNELRPISLCNVAYKVITKVLVNRLRPLLSELVGPLQGSFILGRGMG 139
Query: 58 DNIVLAQEVVHSMRHNK 8
DNI+LA EV+H++ ++K
Sbjct: 140 DNIILAHEVMHTIYNHK 156
>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
Length = 662
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = -3
Query: 247 NATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPGR 68
N T+I LI KV PE I PISLCNVLYKI++KVL NR++ +L ++I PTQ +F+PGR
Sbjct: 179 NETIIVLIPKVPKPENIKDLRPISLCNVLYKIVSKVLANRLKTILPEVISPTQSAFVPGR 238
Query: 67 LITDNIVLAQEVVHSMRHNK 8
LI+DNI++A E+ H MR K
Sbjct: 239 LISDNILVAYEMTHYMRSKK 258
>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/81 (55%), Positives = 60/81 (74%)
Frame = -3
Query: 250 LNATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPG 71
++ TLI+LI K+ P F PISLCN LYKIITKVLV+R++P L++LIGP Q SFLPG
Sbjct: 487 ISNTLIALIPKIDSPNTYKDFRPISLCNTLYKIITKVLVHRLRPFLNNLIGPYQSSFLPG 546
Query: 70 RLITDNIVLAQEVVHSMRHNK 8
R DN ++ QE++H M+ +K
Sbjct: 547 RGTADNSIILQEILHFMKRSK 567
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 97.1 bits (240), Expect = 2e-18
Identities = 48/81 (59%), Positives = 59/81 (72%)
Frame = -3
Query: 247 NATLISLISKVSHPELISQFHPISLCNVLYKIITKVLVNRMQPLLSDLIGPTQGSFLPGR 68
N ++ LI+KV PE I+QF PISLCNVL+K ITK LV R++ ++S LI P Q SF+ GR
Sbjct: 46 NDAIVVLIAKVLKPERITQFRPISLCNVLFKTITKTLVMRLKRVISKLIRPAQASFISGR 105
Query: 67 LITDNIVLAQEVVHSMRHNKG 5
L DNIV+ QE VHSMR KG
Sbjct: 106 LAADNIVIMQEAVHSMRRKKG 126