BLASTX nr result
ID: Rheum21_contig00030035
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00030035
(296 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 116 1e-27
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 110 3e-26
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 110 3e-26
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 110 3e-26
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|... 110 3e-26
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana] 110 3e-26
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 110 3e-26
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 113 4e-26
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 110 6e-26
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 110 6e-26
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 110 6e-26
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 110 6e-26
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 110 6e-26
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 110 6e-26
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 110 6e-26
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera] 114 6e-26
emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera] 113 9e-26
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera] 112 2e-25
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana] 108 2e-25
dbj|BAM44534.1| polyprotein [Arabidopsis thaliana] 108 2e-25
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 116 bits (291), Expect(2) = 1e-27
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKL-QQPAIYCDNQGATFLSS 61
WSS+KQK VARSSTEAEYRA+A+TT+E+ WV SL EL + L + P IYCDN GAT+LS+
Sbjct: 1409 WSSKKQKGVARSSTEAEYRAVANTTSEIRWVCSLLTELGITLPKMPVIYCDNVGATYLSA 1468
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKH+A YHF+R
Sbjct: 1469 NPVFHSRMKHLALDYHFIR 1487
Score = 32.3 bits (72), Expect(2) = 1e-27
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = -1
Query: 293 NDYISTTGYILYLGSTPIS 237
+D++ST YI+YLGSTPI+
Sbjct: 1390 DDFVSTNAYIVYLGSTPIA 1408
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 110 bits (276), Expect(2) = 3e-26
Identities = 51/79 (64%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+T++E+ W+ SL EL ++L +P IYCDN GAT+L +
Sbjct: 1341 WSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCA 1400
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1401 NPVFHSRMKHIAIDYHFIR 1419
Score = 33.1 bits (74), Expect(2) = 3e-26
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1
Query: 296 QNDYISTTGYILYLGSTPIS 237
++DY+ST GYI+YLG PIS
Sbjct: 1321 KDDYVSTNGYIVYLGHHPIS 1340
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 110 bits (276), Expect(2) = 3e-26
Identities = 51/79 (64%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+T++E+ W+ SL EL ++L +P IYCDN GAT+L +
Sbjct: 1341 WSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCA 1400
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1401 NPVFHSRMKHIAIDYHFIR 1419
Score = 33.1 bits (74), Expect(2) = 3e-26
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1
Query: 296 QNDYISTTGYILYLGSTPIS 237
++DY+ST GYI+YLG PIS
Sbjct: 1321 KDDYVSTNGYIVYLGHHPIS 1340
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 110 bits (276), Expect(2) = 3e-26
Identities = 51/79 (64%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+T++E+ W+ SL EL ++L +P IYCDN GAT+L +
Sbjct: 1341 WSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCA 1400
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1401 NPVFHSRMKHIAIDYHFIR 1419
Score = 33.1 bits (74), Expect(2) = 3e-26
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1
Query: 296 QNDYISTTGYILYLGSTPIS 237
++DY+ST GYI+YLG PIS
Sbjct: 1321 KDDYVSTNGYIVYLGHHPIS 1340
>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
polyprotein [Arabidopsis thaliana]
gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
[Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 110 bits (276), Expect(2) = 3e-26
Identities = 51/79 (64%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+T++E+ W+ SL EL ++L +P IYCDN GAT+L +
Sbjct: 1322 WSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCA 1381
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1382 NPVFHSRMKHIAIDYHFIR 1400
Score = 33.1 bits (74), Expect(2) = 3e-26
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1
Query: 296 QNDYISTTGYILYLGSTPIS 237
++DY+ST GYI+YLG PIS
Sbjct: 1302 KDDYVSTNGYIVYLGHHPIS 1321
>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 110 bits (276), Expect(2) = 3e-26
Identities = 51/79 (64%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+T++E+ W+ SL EL ++L +P IYCDN GAT+L +
Sbjct: 1322 WSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCA 1381
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1382 NPVFHSRMKHIAIDYHFIR 1400
Score = 33.1 bits (74), Expect(2) = 3e-26
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1
Query: 296 QNDYISTTGYILYLGSTPIS 237
++DY+ST GYI+YLG PIS
Sbjct: 1302 KDDYVSTNGYIVYLGHHPIS 1321
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 110 bits (276), Expect(2) = 3e-26
Identities = 51/79 (64%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+T++E+ W+ SL EL ++L +P IYCDN GAT+L +
Sbjct: 1306 WSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCA 1365
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1366 NPVFHSRMKHIAIDYHFIR 1384
Score = 33.1 bits (74), Expect(2) = 3e-26
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1
Query: 296 QNDYISTTGYILYLGSTPIS 237
++DY+ST GYI+YLG PIS
Sbjct: 1286 KDDYVSTNGYIVYLGHHPIS 1305
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 113 bits (283), Expect(2) = 4e-26
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK VARSSTEAEYRA+A+ T+E+ WV SL EL + L P +YCDN GAT+LS+
Sbjct: 1326 WSSKKQKGVARSSTEAEYRAVANATSEIRWVCSLLTELGITLSSPPVVYCDNVGATYLSA 1385
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA +HFVR
Sbjct: 1386 NPVFHSRMKHIALDFHFVR 1404
Score = 30.0 bits (66), Expect(2) = 4e-26
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 293 NDYISTTGYILYLGSTPIS 237
++Y ST YILYLGS PIS
Sbjct: 1307 DNYNSTNAYILYLGSNPIS 1325
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 110 bits (275), Expect(2) = 6e-26
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+T++E+ W+ SL EL ++L P IYCDN GAT+L +
Sbjct: 1343 WSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCA 1402
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1403 NPVFHSRMKHIALDYHFIR 1421
Score = 32.7 bits (73), Expect(2) = 6e-26
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 293 NDYISTTGYILYLGSTPIS 237
+DY+ST GYI+YLG PIS
Sbjct: 1324 DDYVSTNGYIVYLGHHPIS 1342
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 110 bits (275), Expect(2) = 6e-26
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+T++E+ W+ SL EL ++L P IYCDN GAT+L +
Sbjct: 1343 WSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCA 1402
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1403 NPVFHSRMKHIALDYHFIR 1421
Score = 32.7 bits (73), Expect(2) = 6e-26
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 293 NDYISTTGYILYLGSTPIS 237
+DY+ST GYI+YLG PIS
Sbjct: 1324 DDYVSTNGYIVYLGHHPIS 1342
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 110 bits (275), Expect(2) = 6e-26
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+T++E+ W+ SL EL ++L P IYCDN GAT+L +
Sbjct: 1343 WSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCA 1402
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1403 NPVFHSRMKHIALDYHFIR 1421
Score = 32.7 bits (73), Expect(2) = 6e-26
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 293 NDYISTTGYILYLGSTPIS 237
+DY+ST GYI+YLG PIS
Sbjct: 1324 DDYVSTNGYIVYLGHHPIS 1342
>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 110 bits (275), Expect(2) = 6e-26
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+T++E+ W+ SL EL ++L P IYCDN GAT+L +
Sbjct: 1343 WSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCA 1402
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1403 NPVFHSRMKHIALDYHFIR 1421
Score = 32.7 bits (73), Expect(2) = 6e-26
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 293 NDYISTTGYILYLGSTPIS 237
+DY+ST GYI+YLG PIS
Sbjct: 1324 DDYVSTNGYIVYLGHHPIS 1342
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 110 bits (275), Expect(2) = 6e-26
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+T++E+ W+ SL EL ++L P IYCDN GAT+L +
Sbjct: 1343 WSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCA 1402
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1403 NPVFHSRMKHIALDYHFIR 1421
Score = 32.7 bits (73), Expect(2) = 6e-26
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 293 NDYISTTGYILYLGSTPIS 237
+DY+ST GYI+YLG PIS
Sbjct: 1324 DDYVSTNGYIVYLGHHPIS 1342
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 110 bits (275), Expect(2) = 6e-26
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+T++E+ W+ SL EL ++L P IYCDN GAT+L +
Sbjct: 1324 WSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCA 1383
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1384 NPVFHSRMKHIALDYHFIR 1402
Score = 32.7 bits (73), Expect(2) = 6e-26
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 293 NDYISTTGYILYLGSTPIS 237
+DY+ST GYI+YLG PIS
Sbjct: 1305 DDYVSTNGYIVYLGHHPIS 1323
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 110 bits (275), Expect(2) = 6e-26
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQP-AIYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+T++E+ W+ SL EL ++L P IYCDN GAT+L +
Sbjct: 1198 WSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCA 1257
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1258 NPVFHSRMKHIALDYHFIR 1276
Score = 32.7 bits (73), Expect(2) = 6e-26
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 293 NDYISTTGYILYLGSTPIS 237
+DY+ST GYI+YLG PIS
Sbjct: 1179 DDYVSTNGYIVYLGHHPIS 1197
>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
Length = 478
Score = 114 bits (284), Expect(2) = 6e-26
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKL-QQPAIYCDNQGATFLSS 61
WSS+KQ+ VARSSTEAEYR++A T AE+ W+ SL EL V L QQP IYCDN GAT L S
Sbjct: 342 WSSKKQRTVARSSTEAEYRSVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVGATNLCS 401
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKH+A YHF+R
Sbjct: 402 NPVFHSRMKHVALDYHFIR 420
Score = 29.3 bits (64), Expect(2) = 6e-26
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1
Query: 296 QNDYISTTGYILYLGSTPIS 237
++D+ ST+ YI+YLG PIS
Sbjct: 322 KDDFTSTSAYIIYLGHNPIS 341
>emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera]
Length = 569
Score = 113 bits (282), Expect(2) = 9e-26
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKL-QQPAIYCDNQGATFLSS 61
WSS+KQ+ VARSSTE EYR++A T AE+ W+ SL EL V L QQP IYCDN GAT L S
Sbjct: 433 WSSKKQRTVARSSTEVEYRSVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVGATHLCS 492
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKH+A YHF+R
Sbjct: 493 NPVFHSRMKHVALDYHFIR 511
Score = 29.3 bits (64), Expect(2) = 9e-26
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1
Query: 296 QNDYISTTGYILYLGSTPIS 237
++D+ ST+ YI+YLG PIS
Sbjct: 413 KDDFTSTSAYIIYLGHNPIS 432
>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
Length = 1112
Score = 112 bits (280), Expect(2) = 2e-25
Identities = 54/79 (68%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKL-QQPAIYCDNQGATFLSS 61
WSS+KQ+ VARSST+AEYR++A T AE+ W+ SL EL V L QQP IYCDN GAT L S
Sbjct: 1002 WSSKKQRTVARSSTKAEYRSVASTAAEICWICSLLTELGVTLPQQPVIYCDNVGATNLYS 1061
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKH+A YHF+R
Sbjct: 1062 NPVFHSRMKHVALDYHFIR 1080
Score = 29.3 bits (64), Expect(2) = 2e-25
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1
Query: 296 QNDYISTTGYILYLGSTPIS 237
++D+ ST+ YI+YLG PIS
Sbjct: 982 KDDFTSTSAYIIYLGHNPIS 1001
>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 108 bits (270), Expect(2) = 2e-25
Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQPA-IYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+ ++E+ W+ SL EL ++L P+ IYCDN GAT+L +
Sbjct: 1343 WSSKKQKGVVRSSTEAEYRSVANISSELQWICSLLTELGIQLSHPSVIYCDNVGATYLCA 1402
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1403 NPVFHSRMKHIALDYHFIR 1421
Score = 32.7 bits (73), Expect(2) = 2e-25
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 293 NDYISTTGYILYLGSTPIS 237
+DY+ST GYI+YLG PIS
Sbjct: 1324 DDYVSTNGYIVYLGHHPIS 1342
>dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 108 bits (270), Expect(2) = 2e-25
Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 WSSRKQKDVARSSTEAEYRALADTTAEVLWVQSLFNELQVKLQQPA-IYCDNQGATFLSS 61
WSS+KQK V RSSTEAEYR++A+ ++E+ W+ SL EL ++L P+ IYCDN GAT+L +
Sbjct: 1343 WSSKKQKGVVRSSTEAEYRSVANISSELQWICSLLTELGIQLSHPSVIYCDNVGATYLCA 1402
Query: 60 NPVFHSRMKHIAFAYHFVR 4
NPVFHSRMKHIA YHF+R
Sbjct: 1403 NPVFHSRMKHIALDYHFIR 1421
Score = 32.7 bits (73), Expect(2) = 2e-25
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 293 NDYISTTGYILYLGSTPIS 237
+DY+ST GYI+YLG PIS
Sbjct: 1324 DDYVSTNGYIVYLGHHPIS 1342