BLASTX nr result
ID: Rheum21_contig00029984
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00029984
(256 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY28415.1| Transducin/WD40 repeat-like superfamily protein i... 97 2e-18
gb|EOY28414.1| Transducin/WD40 repeat-like superfamily protein i... 97 2e-18
gb|EMJ13152.1| hypothetical protein PRUPE_ppa006422mg [Prunus pe... 97 2e-18
ref|XP_006449214.1| hypothetical protein CICLE_v10015313mg [Citr... 96 6e-18
ref|XP_006449213.1| hypothetical protein CICLE_v10015313mg [Citr... 96 6e-18
ref|XP_002277046.2| PREDICTED: telomerase Cajal body protein 1-l... 95 1e-17
ref|XP_004293516.1| PREDICTED: telomerase Cajal body protein 1-l... 94 2e-17
ref|XP_004158026.1| PREDICTED: telomerase Cajal body protein 1-l... 93 3e-17
ref|XP_004146583.1| PREDICTED: telomerase Cajal body protein 1-l... 93 3e-17
ref|XP_002525611.1| WD-repeat protein, putative [Ricinus communi... 92 5e-17
gb|EXB51822.1| Telomerase Cajal body protein 1 [Morus notabilis] 92 9e-17
ref|XP_004504976.1| PREDICTED: telomerase Cajal body protein 1-l... 91 1e-16
ref|XP_006283773.1| hypothetical protein CARUB_v10004860mg [Caps... 91 2e-16
gb|ABD32588.1| Quinonprotein alcohol dehydrogenase-like [Medicag... 89 6e-16
ref|XP_003608233.1| Telomerase Cajal body protein [Medicago trun... 89 6e-16
ref|XP_003529295.1| PREDICTED: telomerase Cajal body protein 1-l... 88 1e-15
ref|XP_004232799.1| PREDICTED: telomerase Cajal body protein 1-l... 87 3e-15
ref|XP_002867841.1| transducin family protein [Arabidopsis lyrat... 87 3e-15
gb|AGN12863.1| putative transducin/WD40 domain-containing protei... 86 4e-15
ref|NP_193883.2| WD40 repeat family protein [Arabidopsis thalian... 86 4e-15
>gb|EOY28415.1| Transducin/WD40 repeat-like superfamily protein isoform 2
[Theobroma cacao]
Length = 291
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 EEKQQPQFEEPAADAAVVAGDSELSEAVEQTSYSWPV-MSFDVPPYRTYNFHRQFRNSSN 193
EE++Q + ++ + + +E SE+ Q + WP+ + FDVPPYRTY+FH+QFR N
Sbjct: 3 EEERQEENQQSNSQIEL----TETSESTNQQGHEWPLKIKFDVPPYRTYHFHKQFRTGPN 58
Query: 194 PNNFLKGVKWSPDGSCFLTSS 256
PNNFLKGVKWSPDGSCFLTSS
Sbjct: 59 PNNFLKGVKWSPDGSCFLTSS 79
>gb|EOY28414.1| Transducin/WD40 repeat-like superfamily protein isoform 1
[Theobroma cacao]
Length = 412
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 EEKQQPQFEEPAADAAVVAGDSELSEAVEQTSYSWPV-MSFDVPPYRTYNFHRQFRNSSN 193
EE++Q + ++ + + +E SE+ Q + WP+ + FDVPPYRTY+FH+QFR N
Sbjct: 3 EEERQEENQQSNSQIEL----TETSESTNQQGHEWPLKIKFDVPPYRTYHFHKQFRTGPN 58
Query: 194 PNNFLKGVKWSPDGSCFLTSS 256
PNNFLKGVKWSPDGSCFLTSS
Sbjct: 59 PNNFLKGVKWSPDGSCFLTSS 79
>gb|EMJ13152.1| hypothetical protein PRUPE_ppa006422mg [Prunus persica]
Length = 412
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/80 (56%), Positives = 55/80 (68%)
Frame = +2
Query: 17 EEKQQPQFEEPAADAAVVAGDSELSEAVEQTSYSWPVMSFDVPPYRTYNFHRQFRNSSNP 196
E+++QP P D+E++E + Y+WP + FDVPP RTY+F QFR S NP
Sbjct: 5 EQRRQPHSPNP---------DTEITENPTEQDYAWPAIRFDVPPQRTYHFCHQFRASPNP 55
Query: 197 NNFLKGVKWSPDGSCFLTSS 256
NNFLKGVKWSPDGSCFLTSS
Sbjct: 56 NNFLKGVKWSPDGSCFLTSS 75
>ref|XP_006449214.1| hypothetical protein CICLE_v10015313mg [Citrus clementina]
gi|568827081|ref|XP_006467896.1| PREDICTED: telomerase
Cajal body protein 1-like [Citrus sinensis]
gi|557551825|gb|ESR62454.1| hypothetical protein
CICLE_v10015313mg [Citrus clementina]
Length = 430
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/82 (54%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Frame = +2
Query: 17 EEKQQPQFEEPAADAAVVAGDSELSEAVE--QTSYSWPVMSFDVPPYRTYNFHRQFRNSS 190
EE+QQ ++ + D+E++EA + Q Y+WP++ FDVPP+RTY+F+ QFR SS
Sbjct: 3 EEEQQQTLQQQQ-----IYSDTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSS 57
Query: 191 NPNNFLKGVKWSPDGSCFLTSS 256
PNNFLKG+KWSPDGS FLTSS
Sbjct: 58 IPNNFLKGIKWSPDGSSFLTSS 79
>ref|XP_006449213.1| hypothetical protein CICLE_v10015313mg [Citrus clementina]
gi|557551824|gb|ESR62453.1| hypothetical protein
CICLE_v10015313mg [Citrus clementina]
Length = 333
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/82 (54%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Frame = +2
Query: 17 EEKQQPQFEEPAADAAVVAGDSELSEAVE--QTSYSWPVMSFDVPPYRTYNFHRQFRNSS 190
EE+QQ ++ + D+E++EA + Q Y+WP++ FDVPP+RTY+F+ QFR SS
Sbjct: 3 EEEQQQTLQQQQ-----IYSDTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSS 57
Query: 191 NPNNFLKGVKWSPDGSCFLTSS 256
PNNFLKG+KWSPDGS FLTSS
Sbjct: 58 IPNNFLKGIKWSPDGSSFLTSS 79
>ref|XP_002277046.2| PREDICTED: telomerase Cajal body protein 1-like [Vitis vinifera]
gi|302144185|emb|CBI23312.3| unnamed protein product
[Vitis vinifera]
Length = 407
Score = 94.7 bits (234), Expect = 1e-17
Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Frame = +2
Query: 8 QAMEE--KQQPQFEEPAADAAVVAGDSELSEAVEQTSYSWPVMSFDVPPYRTYNFHRQFR 181
+AMEE ++QP + A + +E + E+ YSWPV+ FDVPP+R Y+F QFR
Sbjct: 5 EAMEEGEEEQPNLGDEAEEIG-----NEAKQVEEE--YSWPVIRFDVPPHRAYHFCHQFR 57
Query: 182 NSSNPNNFLKGVKWSPDGSCFLTSS 256
SNPNNFLKGVKWSPDGSCFLTSS
Sbjct: 58 TPSNPNNFLKGVKWSPDGSCFLTSS 82
>ref|XP_004293516.1| PREDICTED: telomerase Cajal body protein 1-like [Fragaria vesca
subsp. vesca]
Length = 427
Score = 93.6 bits (231), Expect = 2e-17
Identities = 45/80 (56%), Positives = 50/80 (62%)
Frame = +2
Query: 17 EEKQQPQFEEPAADAAVVAGDSELSEAVEQTSYSWPVMSFDVPPYRTYNFHRQFRNSSNP 196
EE+QQ P D + + E YSWP + FDVPP RTY+F QFR SNP
Sbjct: 5 EEEQQHLSNSPKPDPEITENPIQQEE-----EYSWPAIRFDVPPQRTYHFSHQFRTPSNP 59
Query: 197 NNFLKGVKWSPDGSCFLTSS 256
NNFLK VKWSPDGSCFLTSS
Sbjct: 60 NNFLKAVKWSPDGSCFLTSS 79
>ref|XP_004158026.1| PREDICTED: telomerase Cajal body protein 1-like [Cucumis sativus]
Length = 417
Score = 93.2 bits (230), Expect = 3e-17
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +2
Query: 14 MEEKQQPQFEEPAADAAVVAGDSELSEAV--EQTSYSWPVMSFDVPPYRTYNFHRQFRNS 187
M E + EE + + G++ + +Q SYSWPV+ F+ PP RTY+F+ QFR S
Sbjct: 1 MSETESMLMEEEDENRSNPTGEATAETTMNDDQQSYSWPVIQFNSPPRRTYHFYNQFRTS 60
Query: 188 SNPNNFLKGVKWSPDGSCFLTSS 256
NPNNF KGVKWSPDGSCFLTSS
Sbjct: 61 PNPNNFFKGVKWSPDGSCFLTSS 83
>ref|XP_004146583.1| PREDICTED: telomerase Cajal body protein 1-like [Cucumis sativus]
Length = 417
Score = 93.2 bits (230), Expect = 3e-17
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +2
Query: 14 MEEKQQPQFEEPAADAAVVAGDSELSEAV--EQTSYSWPVMSFDVPPYRTYNFHRQFRNS 187
M E + EE + + G++ + +Q SYSWPV+ F+ PP RTY+F+ QFR S
Sbjct: 1 MSETESMLMEEEDENRSNPTGEATAETTMNDDQQSYSWPVIQFNSPPRRTYHFYNQFRTS 60
Query: 188 SNPNNFLKGVKWSPDGSCFLTSS 256
NPNNF KGVKWSPDGSCFLTSS
Sbjct: 61 PNPNNFFKGVKWSPDGSCFLTSS 83
>ref|XP_002525611.1| WD-repeat protein, putative [Ricinus communis]
gi|223535047|gb|EEF36729.1| WD-repeat protein, putative
[Ricinus communis]
Length = 422
Score = 92.4 bits (228), Expect = 5e-17
Identities = 43/72 (59%), Positives = 58/72 (80%)
Frame = +2
Query: 41 EEPAADAAVVAGDSELSEAVEQTSYSWPVMSFDVPPYRTYNFHRQFRNSSNPNNFLKGVK 220
E+P+ + A +E +E+VEQ + SWPV+ FD+PP RT++F++QFR+S PNNFLKG+K
Sbjct: 4 EQPSIEVA-----AETTESVEQDN-SWPVIRFDLPPQRTHHFYKQFRSSPIPNNFLKGIK 57
Query: 221 WSPDGSCFLTSS 256
WSPDGSCFLTSS
Sbjct: 58 WSPDGSCFLTSS 69
>gb|EXB51822.1| Telomerase Cajal body protein 1 [Morus notabilis]
Length = 425
Score = 91.7 bits (226), Expect = 9e-17
Identities = 48/82 (58%), Positives = 56/82 (68%)
Frame = +2
Query: 11 AMEEKQQPQFEEPAADAAVVAGDSELSEAVEQTSYSWPVMSFDVPPYRTYNFHRQFRNSS 190
A +E QPQ A VVA +E +A YSWPV+ FDVPP RTY+F QFRN+
Sbjct: 2 AEKEGDQPQ-------AHVVADITEQDQA-----YSWPVIRFDVPPNRTYHFCHQFRNTP 49
Query: 191 NPNNFLKGVKWSPDGSCFLTSS 256
NPNNFLK +KWSPDGSCFLT+S
Sbjct: 50 NPNNFLKSLKWSPDGSCFLTTS 71
>ref|XP_004504976.1| PREDICTED: telomerase Cajal body protein 1-like [Cicer arietinum]
Length = 420
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/72 (61%), Positives = 50/72 (69%)
Frame = +2
Query: 41 EEPAADAAVVAGDSELSEAVEQTSYSWPVMSFDVPPYRTYNFHRQFRNSSNPNNFLKGVK 220
EE + D S VE+ YSWPV+ FDVPP+RTY+FHRQF +NPNNFLK VK
Sbjct: 4 EEEEVEVQSQPDDVPNSNEVEEY-YSWPVLRFDVPPHRTYHFHRQFTTPTNPNNFLKAVK 62
Query: 221 WSPDGSCFLTSS 256
WSPDGS FLTSS
Sbjct: 63 WSPDGSSFLTSS 74
>ref|XP_006283773.1| hypothetical protein CARUB_v10004860mg [Capsella rubella]
gi|482552478|gb|EOA16671.1| hypothetical protein
CARUB_v10004860mg [Capsella rubella]
Length = 429
Score = 90.5 bits (223), Expect = 2e-16
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +2
Query: 101 EQTSYSWPVMSFDVPPYRTYNFHRQFRNSSNPNNFLKGVKWSPDGSCFLTSS 256
EQTS SWP M FDV PYRT++F +QFRN+ NPNNFLKG+KWSPDGSCFLTSS
Sbjct: 21 EQTS-SWPNMRFDVSPYRTHHFFKQFRNTRNPNNFLKGLKWSPDGSCFLTSS 71
>gb|ABD32588.1| Quinonprotein alcohol dehydrogenase-like [Medicago truncatula]
Length = 103
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = +2
Query: 44 EPAADAAVVAGDSELSEAVEQTSYSWPVMSFDVPPYRTYNFHRQFRNSSNPNNFLKGVKW 223
E A + + D+ + +E+ YSWPV+ FDV P+RTY+FH+QF + +NPNNFLK VKW
Sbjct: 3 EEAEEVIELQPDASIPNEIEE--YSWPVLRFDVSPHRTYHFHQQFTSPTNPNNFLKAVKW 60
Query: 224 SPDGSCFLTSS 256
SPDGS FLTSS
Sbjct: 61 SPDGSSFLTSS 71
>ref|XP_003608233.1| Telomerase Cajal body protein [Medicago truncatula]
gi|355509288|gb|AES90430.1| Telomerase Cajal body
protein [Medicago truncatula]
Length = 427
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = +2
Query: 44 EPAADAAVVAGDSELSEAVEQTSYSWPVMSFDVPPYRTYNFHRQFRNSSNPNNFLKGVKW 223
E A + + D+ + +E+ YSWPV+ FDV P+RTY+FH+QF + +NPNNFLK VKW
Sbjct: 3 EEAEEVIELQPDASIPNEIEE--YSWPVLRFDVSPHRTYHFHQQFTSPTNPNNFLKAVKW 60
Query: 224 SPDGSCFLTSS 256
SPDGS FLTSS
Sbjct: 61 SPDGSSFLTSS 71
>ref|XP_003529295.1| PREDICTED: telomerase Cajal body protein 1-like [Glycine max]
Length = 447
Score = 88.2 bits (217), Expect = 1e-15
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +2
Query: 23 KQQPQFEEPAADAAVVAGDSELSEAVEQTSYSWPVMSFDVPPYRTYNFHRQFRNSSNPNN 202
+++P+ E ++ G+S S YS+PV+ FDV P+RTY+FHRQF SNPNN
Sbjct: 17 EEEPEVLESESNVVNANGNSSNSNE----EYSFPVLRFDVSPHRTYHFHRQFITPSNPNN 72
Query: 203 FLKGVKWSPDGSCFLTSS 256
F K VKWSPDGSCFLTSS
Sbjct: 73 FFKAVKWSPDGSCFLTSS 90
>ref|XP_004232799.1| PREDICTED: telomerase Cajal body protein 1-like [Solanum
lycopersicum]
Length = 442
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/84 (53%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Frame = +2
Query: 17 EEKQQPQFEEPAADAAVVAGDSELSEAVEQTS----YSWPVMSFDVPPYRTYNFHRQFRN 184
EE + Q + D V EAVE+ Y WPV+ +DVPPY TY+F QFR
Sbjct: 3 EEASEQQLVIESMDEDAVELPETPIEAVEEKPSEEPYPWPVIQYDVPPYLTYHFFNQFRT 62
Query: 185 SSNPNNFLKGVKWSPDGSCFLTSS 256
SNPNNFLKGVKWSPDGS FLT S
Sbjct: 63 PSNPNNFLKGVKWSPDGSGFLTCS 86
>ref|XP_002867841.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297313677|gb|EFH44100.1| transducin family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 426
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = +2
Query: 92 EAVEQTSYSWPVMSFDVPPYRTYNFHRQFRNSSNPNNFLKGVKWSPDGSCFLTSS 256
E+ EQ S SWP M FDV PYRT++F +QFR + NPNNFLKG+KWSPDGSCFL SS
Sbjct: 17 ESGEQNS-SWPTMRFDVSPYRTHHFSKQFRTARNPNNFLKGLKWSPDGSCFLASS 70
>gb|AGN12863.1| putative transducin/WD40 domain-containing protein [Leavenworthia
alabamica]
Length = 425
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = +2
Query: 74 GDSELSEAVEQTSYSWPVMSFDVPPYRTYNFHRQFRNSSNPNNFLKGVKWSPDGSCFLTS 253
G + +A E+ S SWP M FDV PYRT++F +QFR + NPNNFLKG+KWSPDGSCFL S
Sbjct: 12 GGLNMVDAGEKAS-SWPTMRFDVSPYRTHHFSKQFRTARNPNNFLKGLKWSPDGSCFLAS 70
Query: 254 S 256
S
Sbjct: 71 S 71
>ref|NP_193883.2| WD40 repeat family protein [Arabidopsis thaliana]
gi|23296375|gb|AAN13056.1| unknown protein [Arabidopsis
thaliana] gi|332659062|gb|AEE84462.1| WD40 repeat family
protein [Arabidopsis thaliana]
Length = 425
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = +2
Query: 92 EAVEQTSYSWPVMSFDVPPYRTYNFHRQFRNSSNPNNFLKGVKWSPDGSCFLTSS 256
E+ EQ S SWP M FDV PYRT++F +QFR + NPNNFLKG+KWSPDGSCFL SS
Sbjct: 17 ESGEQKS-SWPTMRFDVSPYRTHHFSKQFRTARNPNNFLKGLKWSPDGSCFLASS 70