BLASTX nr result

ID: Rheum21_contig00029917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00029917
         (265 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311132.1| hypothetical protein POPTR_0008s04800g [Popu...    56   4e-06

>ref|XP_002311132.1| hypothetical protein POPTR_0008s04800g [Populus trichocarpa]
           gi|222850952|gb|EEE88499.1| hypothetical protein
           POPTR_0008s04800g [Populus trichocarpa]
          Length = 706

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = +3

Query: 15  PSVEDLHKPFEQQGDSRSQLLEEAVAQVRIYSKLQELLAQNKTLKSGVSPEAHARK--VC 188
           PS+ED  K  +++  +  + L+EA+AQ+RI S+L+ LL + KTL  G SPE HA+K  V 
Sbjct: 254 PSIEDQEKVSDEKAKATIKALKEALAQIRICSRLEGLLLKKKTLSLGDSPEIHAQKVDVA 313

Query: 189 YCDISDL 209
            C + D+
Sbjct: 314 MCQVFDM 320


Top