BLASTX nr result
ID: Rheum21_contig00029898
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00029898
(226 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006848460.1| hypothetical protein AMTR_s00013p00248880 [A... 78 1e-12
ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containin... 77 2e-12
ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containin... 77 2e-12
gb|EXC29929.1| Zinc finger CCCH domain-containing protein ZFN-li... 76 5e-12
gb|EMJ06401.1| hypothetical protein PRUPE_ppa005813mg [Prunus pe... 75 7e-12
ref|XP_002512627.1| nucleic acid binding protein, putative [Rici... 75 1e-11
ref|XP_006480414.1| PREDICTED: zinc finger CCCH domain-containin... 72 6e-11
ref|XP_006428579.1| hypothetical protein CICLE_v10011741mg [Citr... 72 6e-11
ref|XP_006428577.1| hypothetical protein CICLE_v10011741mg [Citr... 72 6e-11
sp|Q9SWF9.1|ZFNL_PEA RecName: Full=Zinc finger CCCH domain-conta... 72 1e-10
gb|EOY09894.1| Zinc finger CCCH domain-containing protein 33 iso... 71 2e-10
gb|EOY09893.1| Zinc finger CCCH domain-containing protein 33 iso... 71 2e-10
ref|XP_004302155.1| PREDICTED: zinc finger CCCH domain-containin... 70 3e-10
ref|XP_006606434.1| PREDICTED: zinc finger CCCH domain-containin... 69 7e-10
ref|XP_006606433.1| PREDICTED: zinc finger CCCH domain-containin... 69 7e-10
ref|XP_006602842.1| PREDICTED: zinc finger CCCH domain-containin... 69 9e-10
ref|XP_002325901.2| zinc finger family protein [Populus trichoca... 69 9e-10
ref|XP_006376056.1| hypothetical protein POPTR_0013s08490g [Popu... 68 1e-09
ref|XP_004172583.1| PREDICTED: zinc finger CCCH domain-containin... 68 1e-09
ref|XP_004142565.1| PREDICTED: zinc finger CCCH domain-containin... 68 1e-09
>ref|XP_006848460.1| hypothetical protein AMTR_s00013p00248880 [Amborella trichopoda]
gi|548851766|gb|ERN10041.1| hypothetical protein
AMTR_s00013p00248880 [Amborella trichopoda]
Length = 467
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/61 (59%), Positives = 41/61 (67%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNLISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRATI 181
+L TGQ KFGSTC FHH P ++S RGS YP V PTTPG SF GG NW +SRA+
Sbjct: 163 YLRTGQCKFGSTCKFHHPQPNAMVSLRGSPVYPPVHSPTTPGQPSFHGGFPNWPMSRASF 222
Query: 182 I 184
I
Sbjct: 223 I 223
>ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Vitis vinifera]
Length = 393
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/62 (59%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNL-ISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KFGSTC FHH P+++ +S RGS YP V PTTPG QS+ GG+ NW LSRA+
Sbjct: 148 YLRTGQCKFGSTCKFHHPQPSSMMVSLRGSPVYPSVPSPTTPGQQSYAGGITNWPLSRAS 207
Query: 179 II 184
I
Sbjct: 208 FI 209
>ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Vitis vinifera]
Length = 441
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/62 (59%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNL-ISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KFGSTC FHH P+++ +S RGS YP V PTTPG QS+ GG+ NW LSRA+
Sbjct: 148 YLRTGQCKFGSTCKFHHPQPSSMMVSLRGSPVYPSVPSPTTPGQQSYAGGITNWPLSRAS 207
Query: 179 II 184
I
Sbjct: 208 FI 209
>gb|EXC29929.1| Zinc finger CCCH domain-containing protein ZFN-like protein [Morus
notabilis]
Length = 419
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/62 (62%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNL-ISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KFGSTC FHH PTN+ +S RGS YP VQ PTTPG QS+ GG+ NW SRA+
Sbjct: 127 YLRTGQCKFGSTCKFHHPQPTNMMVSMRGSPVYPTVQSPTTPGQQSYIGGITNW--SRAS 184
Query: 179 II 184
I
Sbjct: 185 FI 186
>gb|EMJ06401.1| hypothetical protein PRUPE_ppa005813mg [Prunus persica]
Length = 442
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/62 (61%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNL-ISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KFGSTC +HH PTN+ +S RGS YP VQ PTTPG QS+ GG+ NW SRA+
Sbjct: 150 YLRTGQCKFGSTCKYHHPQPTNMMVSLRGSPVYPTVQSPTTPGQQSYAGGITNW--SRAS 207
Query: 179 II 184
I
Sbjct: 208 FI 209
>ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223548588|gb|EEF50079.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 448
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/62 (61%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTN-LISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KFGSTC FHH PTN ++ RGS YP VQ PTTPG QS+ GG+ NW SRA+
Sbjct: 157 YLRTGQCKFGSTCKFHHPQPTNVMVPLRGSPVYPTVQSPTTPGQQSYTGGVTNW--SRAS 214
Query: 179 II 184
I
Sbjct: 215 FI 216
>ref|XP_006480414.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform X2 [Citrus sinensis]
gi|568853552|ref|XP_006480415.1| PREDICTED: zinc finger
CCCH domain-containing protein ZFN-like isoform X3
[Citrus sinensis] gi|568853554|ref|XP_006480416.1|
PREDICTED: zinc finger CCCH domain-containing protein
ZFN-like isoform X4 [Citrus sinensis]
gi|568853556|ref|XP_006480417.1| PREDICTED: zinc finger
CCCH domain-containing protein ZFN-like isoform X5
[Citrus sinensis]
Length = 420
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/62 (59%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNL-ISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KFGSTC FHH P N+ +S RGS YP VQ PTTP QS+ GG+ NW SRA+
Sbjct: 130 YLRTGQCKFGSTCKFHHPQPNNMMVSLRGSPVYPTVQSPTTPSQQSYAGGITNW--SRAS 187
Query: 179 II 184
I
Sbjct: 188 FI 189
>ref|XP_006428579.1| hypothetical protein CICLE_v10011741mg [Citrus clementina]
gi|567871981|ref|XP_006428580.1| hypothetical protein
CICLE_v10011741mg [Citrus clementina]
gi|568853548|ref|XP_006480413.1| PREDICTED: zinc finger
CCCH domain-containing protein ZFN-like isoform X1
[Citrus sinensis] gi|557530636|gb|ESR41819.1|
hypothetical protein CICLE_v10011741mg [Citrus
clementina] gi|557530637|gb|ESR41820.1| hypothetical
protein CICLE_v10011741mg [Citrus clementina]
Length = 439
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/62 (59%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNL-ISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KFGSTC FHH P N+ +S RGS YP VQ PTTP QS+ GG+ NW SRA+
Sbjct: 149 YLRTGQCKFGSTCKFHHPQPNNMMVSLRGSPVYPTVQSPTTPSQQSYAGGITNW--SRAS 206
Query: 179 II 184
I
Sbjct: 207 FI 208
>ref|XP_006428577.1| hypothetical protein CICLE_v10011741mg [Citrus clementina]
gi|567871977|ref|XP_006428578.1| hypothetical protein
CICLE_v10011741mg [Citrus clementina]
gi|568853558|ref|XP_006480418.1| PREDICTED: zinc finger
CCCH domain-containing protein ZFN-like isoform X6
[Citrus sinensis] gi|568853560|ref|XP_006480419.1|
PREDICTED: zinc finger CCCH domain-containing protein
ZFN-like isoform X7 [Citrus sinensis]
gi|568853562|ref|XP_006480420.1| PREDICTED: zinc finger
CCCH domain-containing protein ZFN-like isoform X8
[Citrus sinensis] gi|557530634|gb|ESR41817.1|
hypothetical protein CICLE_v10011741mg [Citrus
clementina] gi|557530635|gb|ESR41818.1| hypothetical
protein CICLE_v10011741mg [Citrus clementina]
Length = 407
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/62 (59%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNL-ISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KFGSTC FHH P N+ +S RGS YP VQ PTTP QS+ GG+ NW SRA+
Sbjct: 117 YLRTGQCKFGSTCKFHHPQPNNMMVSLRGSPVYPTVQSPTTPSQQSYAGGITNW--SRAS 174
Query: 179 II 184
I
Sbjct: 175 FI 176
>sp|Q9SWF9.1|ZFNL_PEA RecName: Full=Zinc finger CCCH domain-containing protein ZFN-like
gi|5616313|gb|AAD45720.1| zinc finger protein [Pisum
sativum]
Length = 417
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNLI-SFRGSFNYPHVQYPTTPGHQSFQGGMINWTLS 169
+L TGQ KFG+TC FHH P+N++ S RGS YP VQ PTTPG QS+ G+ NW+ S
Sbjct: 130 YLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYAAGITNWSSS 186
>gb|EOY09894.1| Zinc finger CCCH domain-containing protein 33 isoform 2 [Theobroma
cacao]
Length = 411
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/62 (59%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNL-ISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KFGSTC FHH PTN+ +S RGS Y V PTTPG QS+ GG+ NW SRA+
Sbjct: 120 YLRTGQCKFGSTCKFHHPQPTNMMVSVRGSPIYQTVPSPTTPGQQSYAGGITNW--SRAS 177
Query: 179 II 184
I
Sbjct: 178 FI 179
>gb|EOY09893.1| Zinc finger CCCH domain-containing protein 33 isoform 1 [Theobroma
cacao]
Length = 451
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/62 (59%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNL-ISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KFGSTC FHH PTN+ +S RGS Y V PTTPG QS+ GG+ NW SRA+
Sbjct: 160 YLRTGQCKFGSTCKFHHPQPTNMMVSVRGSPIYQTVPSPTTPGQQSYAGGITNW--SRAS 217
Query: 179 II 184
I
Sbjct: 218 FI 219
>ref|XP_004302155.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Fragaria vesca subsp. vesca]
Length = 442
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/62 (58%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNL-ISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KF STC +HH PTN+ +S GS YP VQ PTTPG QS+ GG+ NW SRA+
Sbjct: 150 YLRTGQCKFASTCKYHHPPPTNMMVSLSGSPVYPTVQSPTTPGQQSYPGGVTNW--SRAS 207
Query: 179 II 184
I
Sbjct: 208 FI 209
>ref|XP_006606434.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform X2 [Glycine max]
Length = 356
Score = 68.9 bits (167), Expect = 7e-10
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNL-ISFRGSFNYPHVQYPTTPGHQSFQGGMINWT 163
+L TGQ KFG+TC FHH P+N+ +S RGS YP V PTTPG +S+ GG+ NW+
Sbjct: 63 YLRTGQCKFGNTCKFHHPQPSNMMLSLRGSPVYPTVHSPTTPGQESYAGGITNWS 117
>ref|XP_006606433.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform X1 [Glycine max]
Length = 430
Score = 68.9 bits (167), Expect = 7e-10
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNL-ISFRGSFNYPHVQYPTTPGHQSFQGGMINWT 163
+L TGQ KFG+TC FHH P+N+ +S RGS YP V PTTPG +S+ GG+ NW+
Sbjct: 137 YLRTGQCKFGNTCKFHHPQPSNMMLSLRGSPVYPTVHSPTTPGQESYAGGITNWS 191
>ref|XP_006602842.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform X1 [Glycine max]
Length = 426
Score = 68.6 bits (166), Expect = 9e-10
Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTNLI-SFRGSFNYPHVQYPTTPGHQSFQGGMINWTLS 169
+L TGQ KFG+TC FHH P N++ S R S YP V PTTPGHQS+ G+ NW+ S
Sbjct: 138 YLRTGQCKFGNTCKFHHPQPNNMVLSMRSSPVYPTVHSPTTPGHQSYATGITNWSSS 194
>ref|XP_002325901.2| zinc finger family protein [Populus trichocarpa]
gi|550316992|gb|EEF00283.2| zinc finger family protein
[Populus trichocarpa]
Length = 445
Score = 68.6 bits (166), Expect = 9e-10
Identities = 37/63 (58%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTN-LISFRGSFNYPHVQYPTTPGHQSFQGGM-INWTLSRA 175
+L TGQ KFGSTC FHH PTN ++ RGS YP V PTTPG QS+ GG+ NW SRA
Sbjct: 153 YLRTGQCKFGSTCKFHHPQPTNVMVPLRGSPVYPTVNSPTTPGQQSYPGGLATNW--SRA 210
Query: 176 TII 184
+ I
Sbjct: 211 SFI 213
>ref|XP_006376056.1| hypothetical protein POPTR_0013s08490g [Populus trichocarpa]
gi|550325287|gb|ERP53853.1| hypothetical protein
POPTR_0013s08490g [Populus trichocarpa]
Length = 255
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/62 (58%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTN-LISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KFGSTC FHH PTN ++ RGS YP V PTTPG QS+ GG+ T SRA+
Sbjct: 153 YLRTGQCKFGSTCKFHHPQPTNMMVPLRGSPIYPTVSSPTTPGQQSYPGGLAT-TWSRAS 211
Query: 179 II 184
I
Sbjct: 212 FI 213
>ref|XP_004172583.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like,
partial [Cucumis sativus]
Length = 205
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/62 (59%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTN-LISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KFG+TC FHH PTN ++S RGS YP VQ P TPG QS+ GG NW SRA+
Sbjct: 117 YLRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSP-TPGQQSYPGGSTNW--SRAS 173
Query: 179 II 184
I
Sbjct: 174 FI 175
>ref|XP_004142565.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Cucumis sativus]
Length = 367
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/62 (59%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 FLITGQHKFGSTCDFHHLHPTN-LISFRGSFNYPHVQYPTTPGHQSFQGGMINWTLSRAT 178
+L TGQ KFG+TC FHH PTN ++S RGS YP VQ P TPG QS+ GG NW SRA+
Sbjct: 117 YLRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSP-TPGQQSYPGGSTNW--SRAS 173
Query: 179 II 184
I
Sbjct: 174 FI 175