BLASTX nr result
ID: Rheum21_contig00029859
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00029859
(343 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY28628.1| Pyridoxal-5\'-phosphate-dependent enzyme family p... 94 2e-17
ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2,... 89 6e-16
gb|ACU20423.1| unknown [Glycine max] 89 6e-16
ref|XP_002264829.1| PREDICTED: tryptophan synthase beta chain 2,... 89 6e-16
emb|CBI23182.3| unnamed protein product [Vitis vinifera] 89 6e-16
ref|XP_006493944.1| PREDICTED: tryptophan synthase beta chain 1,... 89 8e-16
ref|XP_006452223.1| hypothetical protein CICLE_v10008204mg [Citr... 89 8e-16
ref|XP_006352645.1| PREDICTED: tryptophan synthase beta chain 2,... 88 1e-15
gb|ABR17785.1| unknown [Picea sitchensis] 88 1e-15
ref|XP_002518519.1| tryptophan synthase beta chain, putative [Ri... 87 2e-15
ref|XP_006280413.1| hypothetical protein CARUB_v10026347mg [Caps... 87 2e-15
ref|XP_004294355.1| PREDICTED: tryptophan synthase beta chain 2,... 87 2e-15
gb|EMJ12603.1| hypothetical protein PRUPE_ppa005257mg [Prunus pe... 87 2e-15
gb|EXB88449.1| Tryptophan synthase beta chain 2 [Morus notabilis] 87 3e-15
gb|ESW29159.1| hypothetical protein PHAVU_002G048100g [Phaseolus... 87 3e-15
ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2,... 87 3e-15
ref|XP_003551899.1| PREDICTED: tryptophan synthase beta chain 2,... 87 3e-15
ref|XP_004244142.1| PREDICTED: tryptophan synthase beta chain 2,... 86 4e-15
ref|XP_004158047.1| PREDICTED: tryptophan synthase beta chain 2,... 86 4e-15
ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2,... 86 4e-15
>gb|EOY28628.1| Pyridoxal-5\'-phosphate-dependent enzyme family protein isoform 1
[Theobroma cacao]
Length = 463
Score = 94.0 bits (232), Expect = 2e-17
Identities = 43/57 (75%), Positives = 52/57 (91%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQ 171
A+ A+ RLCKLEGI+PALE++HALA+LEKLCPT+A+G KVVVNISGRGDKD+ VFQ
Sbjct: 400 AIDAYRRLCKLEGIFPALEASHALAFLEKLCPTLANGTKVVVNISGRGDKDSDIVFQ 456
>ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic [Glycine
max]
Length = 479
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/61 (65%), Positives = 50/61 (81%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQCMS 180
AL AF R+ +LEGI PALE++HALAYLEK+CPT+ +GAKVVVN SGRGDKD T +C+
Sbjct: 419 ALEAFKRVSRLEGIIPALETSHALAYLEKVCPTLPNGAKVVVNFSGRGDKDVQTAIKCLK 478
Query: 181 I 183
+
Sbjct: 479 L 479
>gb|ACU20423.1| unknown [Glycine max]
Length = 110
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/61 (65%), Positives = 50/61 (81%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQCMS 180
AL AF R+ +LEGI PALE++HALAYLEK+CPT+ +GAKVVVN SGRGDKD T +C+
Sbjct: 50 ALEAFKRVSRLEGIIPALETSHALAYLEKVCPTLPNGAKVVVNFSGRGDKDVQTAIKCLK 109
Query: 181 I 183
+
Sbjct: 110 L 110
>ref|XP_002264829.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Vitis vinifera]
Length = 477
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/57 (70%), Positives = 50/57 (87%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQ 171
A+ A+ LC+LEGI+PALE++HALA+L+KLCPT+ DG KVVVN SGRGDKDA TVF+
Sbjct: 404 AVDAYQLLCRLEGIFPALEASHALAFLDKLCPTLPDGGKVVVNCSGRGDKDAPTVFR 460
>emb|CBI23182.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/57 (70%), Positives = 50/57 (87%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQ 171
A+ A+ LC+LEGI+PALE++HALA+L+KLCPT+ DG KVVVN SGRGDKDA TVF+
Sbjct: 334 AVDAYQLLCRLEGIFPALEASHALAFLDKLCPTLPDGGKVVVNCSGRGDKDAPTVFR 390
>ref|XP_006493944.1| PREDICTED: tryptophan synthase beta chain 1, chloroplastic-like
isoform X1 [Citrus sinensis]
gi|568882236|ref|XP_006493945.1| PREDICTED: tryptophan
synthase beta chain 1, chloroplastic-like isoform X2
[Citrus sinensis]
Length = 465
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/61 (68%), Positives = 48/61 (78%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQCMS 180
AL AF R +LEGI PALE+AHALAYLEKLCPT+ADG KVVVN SGRGDKD T + +
Sbjct: 405 ALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 464
Query: 181 I 183
+
Sbjct: 465 V 465
>ref|XP_006452223.1| hypothetical protein CICLE_v10008204mg [Citrus clementina]
gi|557555449|gb|ESR65463.1| hypothetical protein
CICLE_v10008204mg [Citrus clementina]
Length = 465
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/61 (68%), Positives = 48/61 (78%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQCMS 180
AL AF R +LEGI PALE+AHALAYLEKLCPT+ADG KVVVN SGRGDKD T + +
Sbjct: 405 ALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 464
Query: 181 I 183
+
Sbjct: 465 V 465
>ref|XP_006352645.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Solanum tuberosum]
Length = 459
Score = 88.2 bits (217), Expect = 1e-15
Identities = 39/56 (69%), Positives = 49/56 (87%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVF 168
A+ A+ RLC+LEGI+PALES+HALA+L+KLC T+ DG KV+VN+SGRGDKDA VF
Sbjct: 397 AIKAYKRLCRLEGIFPALESSHALAFLDKLCSTLKDGEKVIVNLSGRGDKDAEAVF 452
>gb|ABR17785.1| unknown [Picea sitchensis]
Length = 496
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/61 (68%), Positives = 50/61 (81%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQCMS 180
AL AF RL +LEGI PALE++HALAYLEKLCPT+ DG KVV+N SGRGDKD TV + ++
Sbjct: 436 ALDAFQRLSRLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTVIKHLT 495
Query: 181 I 183
I
Sbjct: 496 I 496
>ref|XP_002518519.1| tryptophan synthase beta chain, putative [Ricinus communis]
gi|223542364|gb|EEF43906.1| tryptophan synthase beta
chain, putative [Ricinus communis]
Length = 463
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/55 (70%), Positives = 50/55 (90%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATV 165
A++A+ RLCKLEGI PALE++HALA+LEKLCP +++G KV+V+ SGRGDKDAATV
Sbjct: 402 AINAYQRLCKLEGIIPALEASHALAFLEKLCPNLSNGTKVIVSCSGRGDKDAATV 456
>ref|XP_006280413.1| hypothetical protein CARUB_v10026347mg [Capsella rubella]
gi|482549117|gb|EOA13311.1| hypothetical protein
CARUB_v10026347mg [Capsella rubella]
Length = 469
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/61 (65%), Positives = 50/61 (81%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQCMS 180
AL AF R+ +LEGI PALE++HALAYLEKLCPT+ADG +VV+N SGRGDKD TV + +
Sbjct: 409 ALEAFKRVSRLEGIIPALETSHALAYLEKLCPTLADGTRVVLNFSGRGDKDVQTVAKYLE 468
Query: 181 I 183
+
Sbjct: 469 V 469
>ref|XP_004294355.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 411
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/61 (67%), Positives = 49/61 (80%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQCMS 180
AL AF RL +LEGI PALE++HALAYLEKLCPT+ DGAKVV+N SGRGDKD T + +
Sbjct: 351 ALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPDGAKVVLNCSGRGDKDVHTAIKHLK 410
Query: 181 I 183
+
Sbjct: 411 V 411
>gb|EMJ12603.1| hypothetical protein PRUPE_ppa005257mg [Prunus persica]
Length = 470
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/61 (67%), Positives = 49/61 (80%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQCMS 180
AL AF RL +LEGI PALE++HALAYLEKLCPT+ DGAKVV+N SGRGDKD T + +
Sbjct: 410 ALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPDGAKVVLNCSGRGDKDVHTAIKHLK 469
Query: 181 I 183
+
Sbjct: 470 V 470
>gb|EXB88449.1| Tryptophan synthase beta chain 2 [Morus notabilis]
Length = 478
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVF 168
AL A+ LC+LEGI+PALE+ HALA+L+KLCPT+ G KVVVN SGRGDKDAA VF
Sbjct: 418 ALDAYRLLCRLEGIFPALEACHALAFLDKLCPTLRSGTKVVVNCSGRGDKDAAIVF 473
>gb|ESW29159.1| hypothetical protein PHAVU_002G048100g [Phaseolus vulgaris]
Length = 467
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQ 171
AL A+ +LCKLEGI+P+LE+AHAL L+KL PT+ DG KVVVN SGRGDKDAA VF+
Sbjct: 405 ALDAYQKLCKLEGIFPSLEAAHALGILDKLAPTLCDGTKVVVNCSGRGDKDAAIVFE 461
>ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Cucumis sativus]
Length = 472
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/61 (65%), Positives = 48/61 (78%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQCMS 180
AL AF RL +LEGI PALE++HALAYLEKLCPT+ DG KVV+N SGRGDKD T + +
Sbjct: 412 ALEAFKRLARLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQ 471
Query: 181 I 183
+
Sbjct: 472 V 472
>ref|XP_003551899.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Glycine max]
Length = 471
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/61 (65%), Positives = 50/61 (81%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQCMS 180
AL AF R+ +LEGI PALE++HALAYLEK+CPT+A+GAKVVVN SGRGDKD T + +
Sbjct: 411 ALEAFKRVSRLEGIIPALETSHALAYLEKVCPTLANGAKVVVNFSGRGDKDVQTAIKYLK 470
Query: 181 I 183
+
Sbjct: 471 L 471
>ref|XP_004244142.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Solanum lycopersicum]
Length = 456
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQCMS 180
AL AF RL +LEGI PALE++HALAYLEKLCPT+A+G KVV+N SGRGDKD T + +
Sbjct: 396 ALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLANGTKVVLNCSGRGDKDVQTAIKYLK 455
Query: 181 I 183
+
Sbjct: 456 V 456
>ref|XP_004158047.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Cucumis sativus]
Length = 1563
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVF 168
A+ A+ L KLEGI+PALE++HA AYL+KLCPT+ DG KVVVN SGRGDKDAA VF
Sbjct: 1501 AVEAYKLLAKLEGIFPALEASHAFAYLDKLCPTLPDGCKVVVNCSGRGDKDAAIVF 1556
>ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Cucumis sativus]
Length = 472
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/61 (65%), Positives = 48/61 (78%)
Frame = +1
Query: 1 ALHAFNRLCKLEGIYPALESAHALAYLEKLCPTMADGAKVVVNISGRGDKDAATVFQCMS 180
AL AF RL +LEGI PALE++HALAYLEKLCPT+ DG KVV+N SGRGDKD T + +
Sbjct: 412 ALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQ 471
Query: 181 I 183
+
Sbjct: 472 V 472