BLASTX nr result

ID: Rheum21_contig00029856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00029856
         (289 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006284511.1| hypothetical protein CARUB_v10005711mg [Caps...    57   2e-06
ref|XP_006414648.1| hypothetical protein EUTSA_v10026216mg [Eutr...    55   1e-05

>ref|XP_006284511.1| hypothetical protein CARUB_v10005711mg [Capsella rubella]
           gi|482553216|gb|EOA17409.1| hypothetical protein
           CARUB_v10005711mg [Capsella rubella]
          Length = 216

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/103 (33%), Positives = 38/103 (36%), Gaps = 8/103 (7%)
 Frame = +3

Query: 3   CKPTQNRKQPFECEC--------HGFAFLPCVIPNCTINLXXXXXXXXXXXXXXQNATKG 158
           CK + N    +ECEC        H   FLPCVIPNCT +L                    
Sbjct: 50  CKASSNATFMYECECEDGWKQFDHNLKFLPCVIPNCTFDLTCGEAAPPTQPKTPPKDNNT 109

Query: 159 SAFDVCSWDFXXXXXXXXXXXXXXXXXXXXEGYDNLMNSTSLP 287
           S FD C W                      EGYDNLMN T+ P
Sbjct: 110 SLFDACQW-VDCGGGLCNSTMPFQYSCNCREGYDNLMNITTFP 151


>ref|XP_006414648.1| hypothetical protein EUTSA_v10026216mg [Eutrema salsugineum]
           gi|557115818|gb|ESQ56101.1| hypothetical protein
           EUTSA_v10026216mg [Eutrema salsugineum]
          Length = 216

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/103 (32%), Positives = 38/103 (36%), Gaps = 8/103 (7%)
 Frame = +3

Query: 3   CKPTQNRKQPFECEC--------HGFAFLPCVIPNCTINLXXXXXXXXXXXXXXQNATKG 158
           CKP+ N    +ECEC        H   FLPCV PNCT +L                    
Sbjct: 49  CKPSSNTTFMYECECENGWKQFDHHLKFLPCVTPNCTFDLTCGEAASPSQPKTPPKDNNA 108

Query: 159 SAFDVCSWDFXXXXXXXXXXXXXXXXXXXXEGYDNLMNSTSLP 287
           S F+ C W                      EGY NLMN T+LP
Sbjct: 109 SIFEACHW-VDCGGGFCNSTMPFSYSCDCREGYRNLMNITTLP 150


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