BLASTX nr result

ID: Rheum21_contig00029830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00029830
         (522 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348865.1| PREDICTED: F-box protein At3g07870-like isof...    56   4e-06
ref|XP_006348862.1| PREDICTED: F-box protein At3g07870-like isof...    56   4e-06
gb|EMT07664.1| hypothetical protein F775_21978 [Aegilops tauschii]     55   1e-05

>ref|XP_006348865.1| PREDICTED: F-box protein At3g07870-like isoform X4 [Solanum
           tuberosum]
          Length = 397

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -1

Query: 162 MSDYILEDTLLLIFKYLPVESLLRFRSVCKEWKQLLDSPSLVQDHLS 22
           MSDY+ E+ LL IF  LPV+S+LR RSVCK W  LL SPS    HL+
Sbjct: 1   MSDYLPEELLLDIFTKLPVKSILRCRSVCKSWYSLLTSPSFTFTHLN 47


>ref|XP_006348862.1| PREDICTED: F-box protein At3g07870-like isoform X1 [Solanum
           tuberosum] gi|565364298|ref|XP_006348863.1| PREDICTED:
           F-box protein At3g07870-like isoform X2 [Solanum
           tuberosum] gi|565364300|ref|XP_006348864.1| PREDICTED:
           F-box protein At3g07870-like isoform X3 [Solanum
           tuberosum]
          Length = 464

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -1

Query: 162 MSDYILEDTLLLIFKYLPVESLLRFRSVCKEWKQLLDSPSLVQDHLS 22
           MSDY+ E+ LL IF  LPV+S+LR RSVCK W  LL SPS    HL+
Sbjct: 1   MSDYLPEELLLDIFTKLPVKSILRCRSVCKSWYSLLTSPSFTFTHLN 47


>gb|EMT07664.1| hypothetical protein F775_21978 [Aegilops tauschii]
          Length = 199

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = -1

Query: 153 YILEDTLLLIFKYLPVESLLRFRSVCKEWKQLLDSPSLVQDHLSVQT 13
           Y+ ++ +  I   LPVESLLRFRSVCK W+ ++D  S ++DHL +QT
Sbjct: 14  YLPDELVSEILPRLPVESLLRFRSVCKTWRDIIDDDSFLRDHLRLQT 60


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