BLASTX nr result
ID: Rheum21_contig00029703
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00029703
(211 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 71 1e-10
ref|XP_002339426.1| predicted protein [Populus trichocarpa] 65 7e-09
ref|XP_002336373.1| predicted protein [Populus trichocarpa] 65 7e-09
emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera] 64 2e-08
gb|ACN32036.1| unknown [Zea mays] 64 3e-08
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera] 64 3e-08
ref|XP_002331595.1| predicted protein [Populus trichocarpa] 63 5e-08
ref|XP_002339698.1| predicted protein [Populus trichocarpa] 63 5e-08
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 63 5e-08
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 63 5e-08
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 62 6e-08
gb|ACL54615.1| unknown [Zea mays] 62 8e-08
emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera] 62 8e-08
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 62 8e-08
ref|XP_006492915.1| PREDICTED: uncharacterized protein LOC102618... 62 1e-07
ref|XP_002324404.2| hypothetical protein POPTR_0018s06310g [Popu... 62 1e-07
ref|XP_002337744.1| predicted protein [Populus trichocarpa] 62 1e-07
ref|XP_006487451.1| PREDICTED: uncharacterized protein LOC102607... 61 2e-07
ref|NP_001056109.1| Os05g0527300 [Oryza sativa Japonica Group] g... 61 2e-07
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 61 2e-07
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/69 (44%), Positives = 49/69 (71%)
Frame = -2
Query: 210 QVLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSS 31
+VL+ V++CSTSA +W+TL E++S+ S A+ V TR+ LA+ KKG S+ +YF K + +
Sbjct: 96 EVLSSVVNCSTSASVWTTLSEMYSSHSRARKVNTRIALATTKKGASSVAEYFAKMRGFAD 155
Query: 30 MIAAAGQAL 4
+ AAG+ L
Sbjct: 156 ELGAAGKPL 164
>ref|XP_002339426.1| predicted protein [Populus trichocarpa]
Length = 194
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/68 (45%), Positives = 44/68 (64%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
+L QV C+TS +W +LH F+ +S A+ +Q R QLA+ +K S+T+YF K LS
Sbjct: 100 ILMQVAQCTTSHAVWISLHTTFATQSKAKAIQIRSQLATARKTTQSVTEYFLYVKKLSDE 159
Query: 27 IAAAGQAL 4
+A AGQAL
Sbjct: 160 LAMAGQAL 167
>ref|XP_002336373.1| predicted protein [Populus trichocarpa]
Length = 315
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/68 (45%), Positives = 44/68 (64%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
+L QV C+TS +W +LH F+ +S A+ +Q R QLA+ +K S+T+YF K LS
Sbjct: 100 ILMQVAQCTTSHAVWISLHTTFATQSKAKAIQIRSQLATARKTTQSVTEYFLYVKKLSDE 159
Query: 27 IAAAGQAL 4
+A AGQAL
Sbjct: 160 LAMAGQAL 167
>emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]
Length = 515
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
++ Q++ TS + W LH++FSA S A+I+Q RL+ + KKG DS+ DY K K +S
Sbjct: 73 IMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKGGDSMLDYILKMKTISDN 132
Query: 27 IAAAGQ 10
+AA G+
Sbjct: 133 LAAVGE 138
>gb|ACN32036.1| unknown [Zea mays]
Length = 376
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/69 (42%), Positives = 48/69 (69%)
Frame = -2
Query: 210 QVLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSS 31
+VLA V+D +T+ WSTL ++++ S A+I+Q R+QLA+++KG + +YF K K L+
Sbjct: 106 EVLATVVDATTARGAWSTLERMYASSSRARIMQIRMQLATIQKGDLTAAEYFRKVKRLAD 165
Query: 30 MIAAAGQAL 4
+AA G+ L
Sbjct: 166 TLAAVGKRL 174
>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
Length = 1272
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
++ Q++ TS + W LH++FSA S A+I+Q RL+ + KKG DS+ DY K K +S
Sbjct: 101 IMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKGGDSMLDYILKMKTISDN 160
Query: 27 IAAAGQ 10
+AA G+
Sbjct: 161 LAAXGE 166
>ref|XP_002331595.1| predicted protein [Populus trichocarpa]
Length = 194
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
+LAQV+ ++S +W+ L + FS+RS A+I+Q R QLA+ KG + TDYF K L+
Sbjct: 8 ILAQVVTYTSSKVVWNALDDTFSSRSRARILQIRTQLATATKGSKTTTDYFHYIKRLTDE 67
Query: 27 IAAAGQALH 1
+A AGQ L+
Sbjct: 68 LAVAGQPLN 76
>ref|XP_002339698.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
+LAQV+ ++S +W+ L + FS+RS A+I+Q R QLA+ KG + TDYF K L+
Sbjct: 102 ILAQVVTYTSSKAVWNALDDTFSSRSRARILQIRTQLATATKGSKTATDYFHYIKRLTDE 161
Query: 27 IAAAGQALH 1
+A AGQ L+
Sbjct: 162 MAVAGQPLN 170
>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
Length = 1334
Score = 62.8 bits (151), Expect = 5e-08
Identities = 27/66 (40%), Positives = 43/66 (65%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
++ Q++ TS + W LH++FSA S A+I+Q RL+ + KKG D++ DY K K +S
Sbjct: 101 IMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKGGDAMLDYILKMKTISDN 160
Query: 27 IAAAGQ 10
+AA G+
Sbjct: 161 LAAVGE 166
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 62.8 bits (151), Expect = 5e-08
Identities = 27/66 (40%), Positives = 43/66 (65%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
++ Q++ TS + W LH++FSA S A+I+Q RL+ + KKG D++ DY K K +S
Sbjct: 101 IMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKGGDAMLDYILKMKTISDN 160
Query: 27 IAAAGQ 10
+AA G+
Sbjct: 161 LAAVGE 166
>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
Length = 2203
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/62 (45%), Positives = 43/62 (69%)
Frame = -2
Query: 195 VIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSMIAAA 16
V++C TSA++WS L +LF + S A+ +Q R L SLKKG SI DY K + ++ M++A+
Sbjct: 5 VVNCQTSAEVWSVLEKLFVSNSKARTLQLRFMLQSLKKGALSINDYVLKMRNIADMLSAS 64
Query: 15 GQ 10
G+
Sbjct: 65 GK 66
>gb|ACL54615.1| unknown [Zea mays]
Length = 376
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/69 (40%), Positives = 47/69 (68%)
Frame = -2
Query: 210 QVLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSS 31
+VLA V+D +T+ WSTL ++++ S +I+Q R+QLA+++KG + +YF K K L+
Sbjct: 106 EVLATVVDATTARGAWSTLERMYASSSRVRIMQIRMQLATIQKGDLTAAEYFRKVKRLAD 165
Query: 30 MIAAAGQAL 4
+AA G+ L
Sbjct: 166 TLAAVGKRL 174
>emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera]
Length = 828
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/66 (40%), Positives = 42/66 (63%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
++ Q++ TS + W LH++FSA S A+I+Q RL+ + KKG DS+ DY K +S
Sbjct: 56 IMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKGGDSMLDYILNMKTISDN 115
Query: 27 IAAAGQ 10
+AA G+
Sbjct: 116 LAAVGE 121
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
VLAQV C T+A WS L E++++ + A+ + TR+ L++ KKG SIT+Y K +AL
Sbjct: 93 VLAQVATCGTAATAWSMLEEMYTSMTRARFINTRIALSNTKKGDLSITEYVAKMRALGDD 152
Query: 27 IAAAGQAL 4
+ AAG+ +
Sbjct: 153 MTAAGKVV 160
>ref|XP_006492915.1| PREDICTED: uncharacterized protein LOC102618677 [Citrus sinensis]
Length = 447
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/68 (41%), Positives = 46/68 (67%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
+LA VID +TS Q+W TL +F ++S A+I R+Q+ ++KKG ++DYF K K ++
Sbjct: 167 LLATVIDSTTSKQLWETLASMFISQSQARIQTLRMQIQTIKKGAMHMSDYFVKVKRIADT 226
Query: 27 IAAAGQAL 4
+A AG+ +
Sbjct: 227 LALAGKPI 234
>ref|XP_002324404.2| hypothetical protein POPTR_0018s06310g [Populus trichocarpa]
gi|550318157|gb|EEF02969.2| hypothetical protein
POPTR_0018s06310g [Populus trichocarpa]
Length = 345
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/70 (41%), Positives = 45/70 (64%)
Frame = -2
Query: 210 QVLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSS 31
++L VI C+TS W+TL LF+++S A+ +Q QL LKKG S+ DYF ++L++
Sbjct: 99 KMLTHVIRCTTSISAWTTLETLFTSQSRARTMQVHYQLTILKKGSSSVADYFQWFQSLTN 158
Query: 30 MIAAAGQALH 1
+A GQ L+
Sbjct: 159 SLATVGQPLN 168
>ref|XP_002337744.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
+L QV C+TS +W +LH F+ +S A+ +Q R QLA+ K S+T+YF K LS
Sbjct: 100 ILMQVAQCTTSHAVWISLHTTFATQSKAKAIQIRSQLATACKTTQSVTEYFLYVKKLSDE 159
Query: 27 IAAAGQAL 4
+A GQAL
Sbjct: 160 LAMEGQAL 167
>ref|XP_006487451.1| PREDICTED: uncharacterized protein LOC102607876 [Citrus sinensis]
Length = 448
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
+L VI CST+ ++ TL +F ++S A+I+ ++Q+ +LKKG SITDYF K K +S
Sbjct: 99 LLTTVIHCSTAKELLDTLTSMFVSQSQARIMPLKMQIQTLKKGSMSITDYFAKMKRISDS 158
Query: 27 IAAAGQ 10
+A AG+
Sbjct: 159 LALAGK 164
>ref|NP_001056109.1| Os05g0527300 [Oryza sativa Japonica Group]
gi|113579660|dbj|BAF18023.1| Os05g0527300 [Oryza sativa
Japonica Group] gi|215697357|dbj|BAG91351.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 363
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
VLAQV C T+A W L E++S+ + A+ + TR+ L++ KKG SI +Y +K KAL+
Sbjct: 99 VLAQVATCGTAAAAWQMLEEMYSSVTRARFINTRIALSNTKKGTLSINEYVSKMKALADE 158
Query: 27 IAAAGQ 10
+ AAG+
Sbjct: 159 MTAAGK 164
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = -2
Query: 207 VLAQVIDCSTSAQIWSTLHELFSARSSAQIVQTRLQLASLKKGPDSITDYFTKAKALSSM 28
VLAQV C T+A W L E++S+ + A+ + TR+ L++ KKG SI +Y +K KAL+
Sbjct: 99 VLAQVATCGTAAAAWQMLEEMYSSVTRARFINTRIALSNTKKGTLSINEYVSKMKALADE 158
Query: 27 IAAAGQ 10
+ AAG+
Sbjct: 159 MTAAGK 164