BLASTX nr result

ID: Rheum21_contig00029669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00029669
         (410 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ04501.1| hypothetical protein PRUPE_ppa025846mg [Prunus pe...    58   1e-06
gb|EXC35277.1| F-box protein SKIP23 [Morus notabilis]                  57   3e-06
ref|XP_004149495.1| PREDICTED: putative F-box protein At1g65770-...    56   6e-06

>gb|EMJ04501.1| hypothetical protein PRUPE_ppa025846mg [Prunus persica]
          Length = 450

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = -2

Query: 349 AELPPDIWEEIGNRLPTRCDAAHFRSVCKTWRSSLP-SPTRFPLQLP 212
           + +P ++WE IG RL T+ D + FR+VCK+WRSSLP    +FPLQ P
Sbjct: 3   SRIPDELWESIGKRLNTKTDVSQFRAVCKSWRSSLPLFAKQFPLQFP 49


>gb|EXC35277.1| F-box protein SKIP23 [Morus notabilis]
          Length = 362

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/49 (57%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
 Frame = -2

Query: 349 AELPPDIWEEIGNRLPTRCDAAHFRSVCKTWRSSLP---SPTRFPLQLP 212
           +ELP D+ E I  RL T+ D   FRSVCK+WRSS+P   SP  FPL LP
Sbjct: 11  SELPKDLLETIARRLQTKTDITRFRSVCKSWRSSVPPYQSPFHFPLLLP 59


>ref|XP_004149495.1| PREDICTED: putative F-box protein At1g65770-like [Cucumis sativus]
           gi|449523824|ref|XP_004168923.1| PREDICTED: putative
           F-box protein At1g65770-like [Cucumis sativus]
          Length = 429

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = -2

Query: 349 AELPPDIWEEIGNRLPTRCDAAHFRSVCKTWRSSLP--SPTRFPLQLPRP 206
           +ELPP+IW  +G  L    D   FRSVC++WRSSLP  S T  PL LP P
Sbjct: 9   SELPPEIWPAVGKHLHNYIDVLRFRSVCRSWRSSLPPFSQTSPPLPLPFP 58


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