BLASTX nr result

ID: Rheum21_contig00029586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00029586
         (549 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006424062.1| hypothetical protein CICLE_v10027791mg [Citr...    65   1e-08
emb|CBI39132.3| unnamed protein product [Vitis vinifera]               63   5e-08
ref|XP_002270470.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    63   5e-08
ref|XP_004494262.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    62   7e-08

>ref|XP_006424062.1| hypothetical protein CICLE_v10027791mg [Citrus clementina]
           gi|568869238|ref|XP_006487835.1| PREDICTED: ubiquitin
           carboxyl-terminal hydrolase 8-like [Citrus sinensis]
           gi|557525996|gb|ESR37302.1| hypothetical protein
           CICLE_v10027791mg [Citrus clementina]
          Length = 883

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
 Frame = -1

Query: 372 AEDDFFNTSNVADDTDLLFPRRSRRSSHEFSAAEDRLYLVPYRWWEDAMKEFYRDADEIR 193
           AED   +T  V  D           SS+  +  + R+YLVPYRWW DA +    D+D+ R
Sbjct: 5   AEDHSDSTHRVDSDNS---------SSNNNNNNDQRVYLVPYRWWRDAQESTSSDSDKKR 55

Query: 192 GEIYEXXXXXXXXXXSTVLGGDLDWEIFFSLSRKEIGDLE----GRQDHSSYKYALLPEP 25
           G +Y             ++    + ++ F+L R+E   L+    G    S   YAL+P  
Sbjct: 56  GVLYTATQGTSYGGPMKIINNIFNSDLVFNLRREEEVSLQNGENGEVGVSGRDYALVPGE 115

Query: 24  MWFKALMW 1
           MW +AL W
Sbjct: 116 MWLQALKW 123


>emb|CBI39132.3| unnamed protein product [Vitis vinifera]
          Length = 183

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 49/155 (31%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
 Frame = -1

Query: 459 AAAFLSLLKSLIXXXXXXXXXXXSMDDLFAEDDFFNTSNVADDTDLLFPRRSRRSSHEFS 280
           A + L   KSL            +MDD+F EDDFF   +           RS R S E  
Sbjct: 43  AISALRFCKSLFYYLLFKTLSFFTMDDIFGEDDFFEFDD----------GRSNRVSEEEI 92

Query: 279 AAEDRLYLVPYRWWEDAMKEFYRDADEIRGEIYEXXXXXXXXXXSTVLGGDLDWEIFFSL 100
             E+++Y VPYRW  +A         E  G +Y             ++  D D +I  +L
Sbjct: 93  RVEEKVYFVPYRWLNEA---HGTSLGENEGILY-TASSSTCVGSMEIMSSDFDSQIVLNL 148

Query: 99  SRKE-IGDLEGRQDH-SSYKYALLPEPMWFKALMW 1
            R+E  G  E  ++  S  +YALL E MW +AL W
Sbjct: 149 RREEDNGKNEAAEEGVSGQEYALLSESMWLRALKW 183


>ref|XP_002270470.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
           vinifera]
          Length = 961

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 49/155 (31%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
 Frame = -1

Query: 459 AAAFLSLLKSLIXXXXXXXXXXXSMDDLFAEDDFFNTSNVADDTDLLFPRRSRRSSHEFS 280
           A + L   KSL            +MDD+F EDDFF   +           RS R S E  
Sbjct: 43  AISALRFCKSLFYYLLFKTLSFFTMDDIFGEDDFFEFDD----------GRSNRVSEEEI 92

Query: 279 AAEDRLYLVPYRWWEDAMKEFYRDADEIRGEIYEXXXXXXXXXXSTVLGGDLDWEIFFSL 100
             E+++Y VPYRW  +A         E  G +Y             ++  D D +I  +L
Sbjct: 93  RVEEKVYFVPYRWLNEA---HGTSLGENEGILY-TASSSTCVGSMEIMSSDFDSQIVLNL 148

Query: 99  SRKE-IGDLEGRQDH-SSYKYALLPEPMWFKALMW 1
            R+E  G  E  ++  S  +YALL E MW +AL W
Sbjct: 149 RREEDNGKNEAAEEGVSGQEYALLSESMWLRALKW 183


>ref|XP_004494262.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cicer
           arietinum]
          Length = 941

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 58/182 (31%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
 Frame = -1

Query: 498 TQRLKLRFSLLQPAAAFLSLL--------KSLIXXXXXXXXXXXSMDDLFAEDDFFNTSN 343
           T++L+L F LL+P   FLSLL        KSL            SMD+LF++    N   
Sbjct: 5   TEKLRLSFFLLKPTR-FLSLLSLSTLRLCKSLARSLLSQTLPFFSMDNLFSD----NADY 59

Query: 342 VADDTDLLF------PRRSRRSSHEFSAAEDRLYLVPYRWWEDAMKEFYRDADEIRGEIY 181
           ++DD D  +      P R      E   A++R+YL+PYRWW DA      + D + G +Y
Sbjct: 60  LSDDFDSSYSLRPHRPHRRLLQEDERDFADERVYLLPYRWWIDAEGV---EGDRVEGVLY 116

Query: 180 EXXXXXXXXXXSTVLGGDLDWEIFFSLSRKE----IGDLEGRQDHSSYKYALLPEPMWFK 13
                            D + EI   L ++E    I +LE     S   YAL+PE +W +
Sbjct: 117 TVWSNC-----------DSESEILLHLKKEEDREKIKNLE--VGFSGRHYALVPEGIWLR 163

Query: 12  AL 7
           AL
Sbjct: 164 AL 165


Top