BLASTX nr result

ID: Rheum21_contig00029580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00029580
         (563 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC26395.1| hypothetical protein L484_006446 [Morus notabilis]      56   7e-06
ref|XP_002524096.1| conserved hypothetical protein [Ricinus comm...    56   7e-06
ref|XP_006339183.1| PREDICTED: uncharacterized protein LOC102590...    55   9e-06

>gb|EXC26395.1| hypothetical protein L484_006446 [Morus notabilis]
          Length = 162

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 12/88 (13%)
 Frame = +1

Query: 112 RAIRRRRRQMLVKKGVLPLPSPTSIDAPARRRWGSDEAVVLEISGRNVE----------- 258
           RA+R++RR+   +KGVLP P          RR   DE+ ++++   +V+           
Sbjct: 77  RAMRKKRRR---RKGVLPPPC---------RRHAGDESEIVQVHPVSVQNDVVSDASCSS 124

Query: 259 -KELLQLEKEMRERFFSSGFWRSPSQTD 339
            KE+  LEKEM ERF+S+GFWRSPSQ +
Sbjct: 125 NKEVEALEKEMWERFYSTGFWRSPSQRE 152


>ref|XP_002524096.1| conserved hypothetical protein [Ricinus communis]
           gi|223536664|gb|EEF38306.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 13/92 (14%)
 Frame = +1

Query: 112 RAIRRRRRQMLVKKGVLPLPSP--------TSIDA-PARRRWGSDEAVVLEISGRNVEKE 264
           RA+RR+RR+ L+K+G+LP  +         T I   P   R   +E    +    NV  E
Sbjct: 144 RALRRKRRKQLMKEGLLPARTKRCRCGCDETEIQIHPEMIRLDEEETENGDDDDNNVADE 203

Query: 265 ----LLQLEKEMRERFFSSGFWRSPSQTDT*T 348
               +++LEKEM E F+S+GFWRSPSQ +T T
Sbjct: 204 EDDAMVKLEKEMWETFYSTGFWRSPSQRETPT 235


>ref|XP_006339183.1| PREDICTED: uncharacterized protein LOC102590923 [Solanum tuberosum]
          Length = 171

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
 Frame = +1

Query: 112 RAIRRRRRQMLVKKGVLPLPSP--TSIDAPARRRW--GSDEAVVLEISGRNVEKELLQLE 279
           +A+R+ RR  L+KKG+LP       S D      +   S  AVV        +K+ L+LE
Sbjct: 90  KALRKNRRNRLMKKGLLPASGSGHCSCDEMELHAYQISSPIAVVGGAGNLATDKDALELE 149

Query: 280 KEMRERFFSSGFWRSPSQ 333
           KEM E+F+ +GFWRSPSQ
Sbjct: 150 KEMWEKFYGTGFWRSPSQ 167


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