BLASTX nr result
ID: Rheum21_contig00029573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00029573
(298 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006468080.1| PREDICTED: pentatricopeptide repeat-containi... 114 2e-23
ref|XP_006436374.1| hypothetical protein CICLE_v10031036mg [Citr... 113 2e-23
ref|XP_002310672.1| pentatricopeptide repeat-containing family p... 104 1e-20
ref|XP_002513372.1| pentatricopeptide repeat-containing protein,... 103 2e-20
ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi... 102 7e-20
emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera] 102 7e-20
gb|EMJ14021.1| hypothetical protein PRUPE_ppa020651mg [Prunus pe... 100 2e-19
gb|EXB37173.1| hypothetical protein L484_013537 [Morus notabilis] 97 2e-18
gb|EOY26299.1| Tetratricopeptide repeat-like superfamily protein... 96 4e-18
ref|XP_006365554.1| PREDICTED: pentatricopeptide repeat-containi... 96 7e-18
ref|XP_004306585.1| PREDICTED: pentatricopeptide repeat-containi... 95 8e-18
ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containi... 95 8e-18
emb|CBI38763.3| unnamed protein product [Vitis vinifera] 95 8e-18
emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera] 95 8e-18
ref|XP_004233109.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
gb|AFG55302.1| hypothetical protein 0_14503_01, partial [Pinus t... 92 6e-17
gb|AFG55306.1| hypothetical protein 0_14503_01, partial [Pinus t... 92 7e-17
gb|AFG55300.1| hypothetical protein 0_14503_01, partial [Pinus t... 92 7e-17
gb|AEW07919.1| hypothetical protein 0_14503_01, partial [Pinus l... 92 7e-17
gb|AEW07918.1| hypothetical protein 0_14503_01, partial [Pinus r... 92 7e-17
>ref|XP_006468080.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g20730-like isoform X1 [Citrus sinensis]
gi|568827470|ref|XP_006468081.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g20730-like isoform X2 [Citrus sinensis]
gi|568827472|ref|XP_006468082.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g20730-like isoform X3 [Citrus sinensis]
Length = 590
Score = 114 bits (284), Expect = 2e-23
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
I+P A+LW +ILGACS++G+ SL E+AA NLF++EP S NYVVL+ IY+A G WDNA
Sbjct: 499 IRPTASLWSAILGACSIYGNASLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAWK 558
Query: 185 TRALMEQRGLKKSPGYSYLHPMEKQTKLL 271
TR LME+R L+K+PGYS+L +K+ LL
Sbjct: 559 TRKLMEERSLRKNPGYSFLQSSKKKILLL 587
>ref|XP_006436374.1| hypothetical protein CICLE_v10031036mg [Citrus clementina]
gi|557538570|gb|ESR49614.1| hypothetical protein
CICLE_v10031036mg [Citrus clementina]
Length = 590
Score = 113 bits (283), Expect = 2e-23
Identities = 52/89 (58%), Positives = 68/89 (76%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
I+P A+LW +ILGACS++G+ SL E+AA NLF++EP S NYVVL+ IY+A G WDNA
Sbjct: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
Query: 185 TRALMEQRGLKKSPGYSYLHPMEKQTKLL 271
TR LME+R L+K+PGYS+L +K LL
Sbjct: 559 TRKLMEERSLRKNPGYSFLQSSKKNILLL 587
>ref|XP_002310672.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222853575|gb|EEE91122.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 551
Score = 104 bits (260), Expect = 1e-20
Identities = 48/79 (60%), Positives = 63/79 (79%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
I+PNA+LW +ILGAC ++G++ LAE AA +LF ++P NS NYVVLA IY+A G WDNA
Sbjct: 466 IKPNASLWGAILGACYIYGNMPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWK 525
Query: 185 TRALMEQRGLKKSPGYSYL 241
R LME+R LKK+PGYS++
Sbjct: 526 MRKLMEERNLKKAPGYSFI 544
>ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547280|gb|EEF48775.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 597
Score = 103 bits (258), Expect = 2e-20
Identities = 50/89 (56%), Positives = 63/89 (70%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
I+PN++LW +ILGACS++G +SL EVAA +L ++P NS NYVVLAGIY+A G WD A
Sbjct: 506 IKPNSSLWGAILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACR 565
Query: 185 TRALMEQRGLKKSPGYSYLHPMEKQTKLL 271
R LME R LKK PGYS + K + L
Sbjct: 566 MRNLMEYRSLKKIPGYSIIQSTNKNMRRL 594
>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1724
Score = 102 bits (253), Expect = 7e-20
Identities = 49/89 (55%), Positives = 64/89 (71%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
I+ NA+LW +ILGA S++G +SL + AA NLFN++P NS NYVVLA IYSA G+WD+A
Sbjct: 499 IKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWK 558
Query: 185 TRALMEQRGLKKSPGYSYLHPMEKQTKLL 271
R LME+R KK+ GYS+ +K LL
Sbjct: 559 IRKLMEERSTKKNAGYSFFQATKKSIPLL 587
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/84 (32%), Positives = 47/84 (55%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
+ PN WRS+L AC +HG++ LA A +L L+P++ + YV+ + + + G W++
Sbjct: 1517 VPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVEN 1576
Query: 185 TRALMEQRGLKKSPGYSYLHPMEK 256
R M +KK P S++ +K
Sbjct: 1577 LRKEMGSNNIKKQPACSWVKLKDK 1600
>emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
Length = 711
Score = 102 bits (253), Expect = 7e-20
Identities = 49/89 (55%), Positives = 64/89 (71%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
I+ NA+LW +ILGA S++G +SL + AA NLFN++P NS NYVVLA IYSA G+WD+A
Sbjct: 620 IKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWK 679
Query: 185 TRALMEQRGLKKSPGYSYLHPMEKQTKLL 271
R LME+R KK+ GYS+ +K LL
Sbjct: 680 IRKLMEERSTKKNAGYSFFQATKKSIPLL 708
>gb|EMJ14021.1| hypothetical protein PRUPE_ppa020651mg [Prunus persica]
Length = 588
Score = 100 bits (249), Expect = 2e-19
Identities = 49/88 (55%), Positives = 62/88 (70%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
I+PNA+LW +ILGACS++G+ SL E+AA +LF ++P NS NYVVL IY+A G WDNA
Sbjct: 497 IKPNASLWGAILGACSIYGNRSLGELAAMHLFEMDPKNSVNYVVLGSIYAASGAWDNALE 556
Query: 185 TRALMEQRGLKKSPGYSYLHPMEKQTKL 268
TR L+E R LKK P S L +T L
Sbjct: 557 TRNLIENRSLKKEPAQSLLQSTTTKTVL 584
>gb|EXB37173.1| hypothetical protein L484_013537 [Morus notabilis]
Length = 312
Score = 97.1 bits (240), Expect = 2e-18
Identities = 44/83 (53%), Positives = 61/83 (73%)
Frame = +2
Query: 8 QPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGTT 187
+PNAA+W S+LGAC +H + +LAE AA +LF LEP +S NY++LA IYSA G W++A
Sbjct: 106 EPNAAVWGSLLGACRIHSNPNLAEYAAKHLFELEPQSSGNYILLANIYSAAGRWEDAAKI 165
Query: 188 RALMEQRGLKKSPGYSYLHPMEK 256
R LM++RG+ KSPG S++ K
Sbjct: 166 RGLMKERGVTKSPGCSWIEVKRK 188
>gb|EOY26299.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 603
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
I+P +LW ++LGA +++G++S+ E AA +LFN++P S NY+ LAGIY+ G W+NA
Sbjct: 512 IEPTTSLWGALLGASNIYGNMSIGEAAAAHLFNMDPEKSVNYIALAGIYAGAGAWENAWE 571
Query: 185 TRALMEQRGLKKSPGYSYLHPMEKQTKLL 271
TR LM++R K P YS L EK+ LL
Sbjct: 572 TRKLMDKRSAVKDPAYSLLSSTEKKVVLL 600
>ref|XP_006365554.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g20730-like [Solanum tuberosum]
Length = 614
Score = 95.5 bits (236), Expect = 7e-18
Identities = 44/89 (49%), Positives = 62/89 (69%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
I+P+A+LW S+LGACS++G++ L +VAA +L N+EP N+ YVVLA +YSA G+WD+A
Sbjct: 523 IKPSASLWGSVLGACSIYGNMDLGKVAARHLCNIEPTNAVGYVVLASMYSAAGLWDSAWK 582
Query: 185 TRALMEQRGLKKSPGYSYLHPMEKQTKLL 271
R +++ R L K PGYS H LL
Sbjct: 583 ERDVVQTRRLPKDPGYSLFHSGNDMVALL 611
>ref|XP_004306585.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g20730-like [Fragaria vesca subsp. vesca]
Length = 588
Score = 95.1 bits (235), Expect = 8e-18
Identities = 44/79 (55%), Positives = 59/79 (74%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
I+PNA+LW +ILGACS +G+ SL EVAA +L++++P S NYVVL IY+A G WDNA
Sbjct: 497 IKPNASLWGAILGACSNYGNKSLGEVAAMHLYDIDPEKSVNYVVLGSIYAASGAWDNALE 556
Query: 185 TRALMEQRGLKKSPGYSYL 241
TR L++ R +KK P +S L
Sbjct: 557 TRGLVDNRSMKKEPAHSLL 575
>ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
+QP+A +W+++L AC VHG+V L E AA NLF LEP N+ YV+L+ +YSA G W+ A
Sbjct: 579 VQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAK 638
Query: 185 TRALMEQRGLKKSPGYSYLHPMEK 256
TR LM+ RG+ K PG S++ K
Sbjct: 639 TRRLMKLRGVSKEPGCSWIEMSSK 662
>emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
+QP+A +W+++L AC VHG+V L E AA NLF LEP N+ YV+L+ +YSA G W+ A
Sbjct: 512 VQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAK 571
Query: 185 TRALMEQRGLKKSPGYSYLHPMEK 256
TR LM+ RG+ K PG S++ K
Sbjct: 572 TRRLMKLRGVSKEPGCSWIEMSSK 595
>emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
+QP+A +W+++L AC VHG+V L E AA NLF LEP N+ YV+L+ +YSA G W+ A
Sbjct: 233 VQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAK 292
Query: 185 TRALMEQRGLKKSPGYSYLHPMEK 256
TR LM+ RG+ K PG S++ K
Sbjct: 293 TRRLMKLRGVSKEPGCSWIEMSSK 316
>ref|XP_004233109.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g20730-like [Solanum lycopersicum]
Length = 614
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/89 (48%), Positives = 61/89 (68%)
Frame = +2
Query: 5 IQPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGT 184
I+P+A+LW S+LGACS++ ++ L +VAA +L N+EP N+ YVVLA +YSA G+WD+A
Sbjct: 523 IKPSASLWGSVLGACSIYSNMDLGKVAARHLCNIEPTNAVGYVVLASMYSAAGLWDSAWK 582
Query: 185 TRALMEQRGLKKSPGYSYLHPMEKQTKLL 271
R +++ R L K PGYS H LL
Sbjct: 583 ERDVVQTRRLPKDPGYSLFHSGNDMVALL 611
>gb|AFG55302.1| hypothetical protein 0_14503_01, partial [Pinus taeda]
Length = 160
Score = 92.4 bits (228), Expect = 6e-17
Identities = 39/83 (46%), Positives = 59/83 (71%)
Frame = +2
Query: 8 QPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGTT 187
+PNA +W ++LGAC +H ++ LAE A LF L+P N+ NYV+L+ IY+A G WDN G
Sbjct: 44 EPNADVWSALLGACRIHLNIELAERVAKELFELQPENAGNYVLLSNIYAAAGEWDNVGKI 103
Query: 188 RALMEQRGLKKSPGYSYLHPMEK 256
R +M+ +GLK+SPG S++ ++
Sbjct: 104 RKIMKDKGLKRSPGCSWIEHKDR 126
>gb|AFG55306.1| hypothetical protein 0_14503_01, partial [Pinus taeda]
Length = 160
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/78 (50%), Positives = 57/78 (73%)
Frame = +2
Query: 8 QPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGTT 187
+PNA +W ++LGAC +H ++ LAE A LF L+P N+ NYV+L+ IY+A G WDN G
Sbjct: 44 EPNADVWSALLGACRIHLNIELAERVAKELFELQPENAGNYVLLSNIYAAAGKWDNVGKI 103
Query: 188 RALMEQRGLKKSPGYSYL 241
R +M+ +GLK+SPG S++
Sbjct: 104 RKIMKDKGLKRSPGCSWI 121
>gb|AFG55300.1| hypothetical protein 0_14503_01, partial [Pinus taeda]
Length = 160
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/78 (50%), Positives = 57/78 (73%)
Frame = +2
Query: 8 QPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGTT 187
+PNA +W ++LGAC +H ++ LAE A LF L+P N+ NYV+L+ IY+A G WDN G
Sbjct: 44 EPNADVWSALLGACRIHLNIKLAERVAKELFELQPENAGNYVLLSNIYAAAGEWDNVGKI 103
Query: 188 RALMEQRGLKKSPGYSYL 241
R +M+ +GLK+SPG S++
Sbjct: 104 RKIMKDKGLKRSPGCSWI 121
>gb|AEW07919.1| hypothetical protein 0_14503_01, partial [Pinus lambertiana]
Length = 160
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/78 (50%), Positives = 57/78 (73%)
Frame = +2
Query: 8 QPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGTT 187
+PNA +W ++LGAC +H ++ LAE AA LF L+P N+ NYV+L+ IY+A G WDN G
Sbjct: 44 EPNADVWSALLGACRIHLNIELAERAAKELFELQPENAGNYVLLSNIYAAAGKWDNVGKI 103
Query: 188 RALMEQRGLKKSPGYSYL 241
R +M +GLK++PG S++
Sbjct: 104 RKIMRDKGLKRTPGCSWI 121
>gb|AEW07918.1| hypothetical protein 0_14503_01, partial [Pinus radiata]
gi|383147104|gb|AFG55296.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147108|gb|AFG55298.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147110|gb|AFG55299.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147114|gb|AFG55301.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147118|gb|AFG55303.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147120|gb|AFG55304.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147122|gb|AFG55305.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147126|gb|AFG55307.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147128|gb|AFG55308.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147130|gb|AFG55309.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147132|gb|AFG55310.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147134|gb|AFG55311.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
gi|383147136|gb|AFG55312.1| hypothetical protein
0_14503_01, partial [Pinus taeda]
Length = 160
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/78 (50%), Positives = 57/78 (73%)
Frame = +2
Query: 8 QPNAALWRSILGACSVHGSVSLAEVAAGNLFNLEPNNSTNYVVLAGIYSALGVWDNAGTT 187
+PNA +W ++LGAC +H ++ LAE A LF L+P N+ NYV+L+ IY+A G WDN G
Sbjct: 44 EPNADVWSALLGACRIHLNIELAERVAKELFELQPENAGNYVLLSNIYAAAGEWDNVGKI 103
Query: 188 RALMEQRGLKKSPGYSYL 241
R +M+ +GLK+SPG S++
Sbjct: 104 RKIMKDKGLKRSPGCSWI 121