BLASTX nr result

ID: Rheum21_contig00029572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00029572
         (299 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002338928.1| predicted protein [Populus trichocarpa]            57   3e-06
ref|XP_002323541.2| hypothetical protein POPTR_0016s11570g [Popu...    55   7e-06

>ref|XP_002338928.1| predicted protein [Populus trichocarpa]
          Length = 138

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
 Frame = -2

Query: 298 RGEYRDQSHYKLKQVKIVRFDEQWNAMEFAKYVLTNAVALEQMLIL---TRRHIYLRDKF 128
           R EY   +H  LK+VK+  F ++WNAME A Y+L N +ALE+M+++   +   + LR + 
Sbjct: 61  RREYSRHTHSHLKEVKMEGFRDKWNAMELAIYLLKNTIALERMVVVVSDSTMQMDLRQRV 120

Query: 127 ESLQHKEI-NPTAQVII 80
           ++L  KE  N TA++II
Sbjct: 121 DNLLQKEKGNSTAELII 137


>ref|XP_002323541.2| hypothetical protein POPTR_0016s11570g [Populus trichocarpa]
           gi|550321288|gb|EEF05302.2| hypothetical protein
           POPTR_0016s11570g [Populus trichocarpa]
          Length = 426

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
 Frame = -2

Query: 298 RGEYRDQSHYKLKQVKIVRFDEQWNAMEFAKYVLTNAVALEQMLIL---TRRHIYLRDKF 128
           R EY   +H  LK+VK+  F ++WNAME A Y+L N +ALE+M+++   +   + LR + 
Sbjct: 349 RREYSRHTHSHLKEVKMEGFRDKWNAMELAIYLLKNTIALERMVVVVSGSTLQMDLRQRV 408

Query: 127 ESLQHKEI-NPTAQVII 80
            +L  KE  N TA++II
Sbjct: 409 TNLLQKERGNSTAELII 425


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