BLASTX nr result
ID: Rheum21_contig00029546
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00029546
(241 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY09401.1| Pentatricopeptide repeat superfamily protein [The... 130 2e-28
ref|XP_004497943.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 127 1e-27
ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago t... 127 2e-27
ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat... 127 2e-27
ref|XP_006490046.1| PREDICTED: putative pentatricopeptide repeat... 126 3e-27
ref|XP_004306162.1| PREDICTED: putative pentatricopeptide repeat... 126 3e-27
ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [S... 126 3e-27
ref|XP_006421479.1| hypothetical protein CICLE_v10006760mg [Citr... 125 6e-27
gb|EMJ04473.1| hypothetical protein PRUPE_ppa025467mg [Prunus pe... 125 6e-27
ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat... 125 8e-27
ref|XP_006656246.1| PREDICTED: putative pentatricopeptide repeat... 124 1e-26
ref|XP_006299919.1| hypothetical protein CARUB_v10016128mg [Caps... 124 1e-26
ref|XP_002322694.1| pentatricopeptide repeat-containing family p... 124 1e-26
ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat... 124 1e-26
emb|CBI29893.3| unnamed protein product [Vitis vinifera] 124 1e-26
gb|ESW17642.1| hypothetical protein PHAVU_007G256700g [Phaseolus... 123 2e-26
ref|NP_187990.1| pentatricopeptide repeat-containing protein [Ar... 122 4e-26
gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays] 122 4e-26
gb|EMT28838.1| hypothetical protein F775_05778 [Aegilops tauschii] 122 5e-26
ref|XP_002882843.1| pentatricopeptide repeat-containing protein ... 122 5e-26
>gb|EOY09401.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 718
Score = 130 bits (326), Expect = 2e-28
Identities = 56/80 (70%), Positives = 74/80 (92%)
Frame = +2
Query: 2 PNVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNK 181
P++EHYGC+VDLLGRAG++++A +F+++MP EPTAA+WGSLLGACR+H N+ IGE VG +
Sbjct: 349 PDIEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAALWGSLLGACRVHSNIDIGEFVGRR 408
Query: 182 LLEMEPDNAGNYVILSNLYA 241
LLE+EP+NAGNYVILSNL+A
Sbjct: 409 LLEIEPENAGNYVILSNLFA 428
>ref|XP_004497943.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Cicer arietinum]
Length = 642
Score = 127 bits (320), Expect = 1e-27
Identities = 57/80 (71%), Positives = 73/80 (91%)
Frame = +2
Query: 2 PNVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNK 181
P +EH+GC+VDLLGR+G++++A +F+++MP EPTAAIWGSLLGACR+H NV IGE VG++
Sbjct: 405 PEMEHFGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFVGHR 464
Query: 182 LLEMEPDNAGNYVILSNLYA 241
LLE+EP NAGNYVILSNLYA
Sbjct: 465 LLEIEPANAGNYVILSNLYA 484
>ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 840
Score = 127 bits (319), Expect = 2e-27
Identities = 57/80 (71%), Positives = 71/80 (88%)
Frame = +2
Query: 2 PNVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNK 181
P +EHYGC+VDLLGR+G++++A +F+++MP EPTAAIWGSLLGACR+H NV IGE G +
Sbjct: 603 PKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQ 662
Query: 182 LLEMEPDNAGNYVILSNLYA 241
LLE+EP NAGNYVILSNLYA
Sbjct: 663 LLEIEPGNAGNYVILSNLYA 682
>ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Setaria italica]
Length = 608
Score = 127 bits (318), Expect = 2e-27
Identities = 56/79 (70%), Positives = 69/79 (87%)
Frame = +2
Query: 5 NVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNKL 184
N+EHYGC++DLLGR+G+L KAL +++MP EPT AIWGSLLGACR+H NV +GE V KL
Sbjct: 372 NIEHYGCVIDLLGRSGRLQKALNLIQKMPFEPTRAIWGSLLGACRVHVNVHVGEFVAQKL 431
Query: 185 LEMEPDNAGNYVILSNLYA 241
LE+EP+NAGNYVILSN+YA
Sbjct: 432 LEIEPENAGNYVILSNIYA 450
>ref|XP_006490046.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Citrus sinensis]
Length = 644
Score = 126 bits (316), Expect = 3e-27
Identities = 57/80 (71%), Positives = 72/80 (90%)
Frame = +2
Query: 2 PNVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNK 181
P +EHYGC+VD+LGRAG++ +AL+F+++MP EPTAAI GSLLGACR+H NV IGE VG +
Sbjct: 407 PEIEHYGCVVDMLGRAGRVGEALEFIKKMPFEPTAAILGSLLGACRVHSNVDIGEFVGQR 466
Query: 182 LLEMEPDNAGNYVILSNLYA 241
L+E+EP+NAGNYVILSNLYA
Sbjct: 467 LMEIEPENAGNYVILSNLYA 486
>ref|XP_004306162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 637
Score = 126 bits (316), Expect = 3e-27
Identities = 56/80 (70%), Positives = 73/80 (91%)
Frame = +2
Query: 2 PNVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNK 181
P +EHYGC+VDLLGR+G++++A +F+++MP EPTAAIWGSLLGACR+H NV IGE VG +
Sbjct: 400 PELEHYGCVVDLLGRSGRVEEAFEFIKKMPSEPTAAIWGSLLGACRVHSNVKIGEFVGFQ 459
Query: 182 LLEMEPDNAGNYVILSNLYA 241
LL++EP+NAGNYVILSNL+A
Sbjct: 460 LLDIEPENAGNYVILSNLFA 479
>ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein
SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 126 bits (316), Expect = 3e-27
Identities = 56/79 (70%), Positives = 68/79 (86%)
Frame = +2
Query: 5 NVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNKL 184
N EHYGC++DLLGR+GQL KAL +E+MP +PT AIWGSLLGACR+H NV +GE V KL
Sbjct: 352 NTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKL 411
Query: 185 LEMEPDNAGNYVILSNLYA 241
L++EP+NAGNYVILSN+YA
Sbjct: 412 LDIEPENAGNYVILSNIYA 430
>ref|XP_006421479.1| hypothetical protein CICLE_v10006760mg [Citrus clementina]
gi|557523352|gb|ESR34719.1| hypothetical protein
CICLE_v10006760mg [Citrus clementina]
Length = 688
Score = 125 bits (314), Expect = 6e-27
Identities = 57/80 (71%), Positives = 71/80 (88%)
Frame = +2
Query: 2 PNVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNK 181
P +EHYGC+VD+LGRAG++ +AL+F++ MP EPTAAI GSLLGACR+H NV IGE VG +
Sbjct: 349 PEIEHYGCVVDMLGRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQR 408
Query: 182 LLEMEPDNAGNYVILSNLYA 241
L+E+EP+NAGNYVILSNLYA
Sbjct: 409 LMEIEPENAGNYVILSNLYA 428
>gb|EMJ04473.1| hypothetical protein PRUPE_ppa025467mg [Prunus persica]
Length = 575
Score = 125 bits (314), Expect = 6e-27
Identities = 57/80 (71%), Positives = 72/80 (90%)
Frame = +2
Query: 2 PNVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNK 181
P +EHYGC+VDLLGRAG++++A +F+++M EPTAAIWGSLLGACR+H NV IGE VG +
Sbjct: 350 PELEHYGCVVDLLGRAGRVEEAFEFIKKMRFEPTAAIWGSLLGACRVHSNVEIGEFVGFR 409
Query: 182 LLEMEPDNAGNYVILSNLYA 241
LL++EP+NAGNYVILSNLYA
Sbjct: 410 LLQIEPENAGNYVILSNLYA 429
>ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 125 bits (313), Expect = 8e-27
Identities = 56/79 (70%), Positives = 66/79 (83%)
Frame = +2
Query: 5 NVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNKL 184
++ HYGC++DLLGR+GQL KAL +E MP EPT AIWGSLLGACR+H NV +GE V KL
Sbjct: 378 HIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKL 437
Query: 185 LEMEPDNAGNYVILSNLYA 241
L+MEP NAGNYVILSN+YA
Sbjct: 438 LDMEPGNAGNYVILSNIYA 456
>ref|XP_006656246.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Oryza brachyantha]
Length = 438
Score = 124 bits (312), Expect = 1e-26
Identities = 55/76 (72%), Positives = 66/76 (86%)
Frame = +2
Query: 14 HYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNKLLEM 193
HYGC++DLLGR+G+L+KAL +E MP EPT +IWGSLLGACR+H NV +GE V KLLEM
Sbjct: 205 HYGCVIDLLGRSGRLEKALNLIENMPLEPTPSIWGSLLGACRVHANVHVGELVAQKLLEM 264
Query: 194 EPDNAGNYVILSNLYA 241
EP+NAGNYVILSN+YA
Sbjct: 265 EPENAGNYVILSNIYA 280
>ref|XP_006299919.1| hypothetical protein CARUB_v10016128mg [Capsella rubella]
gi|482568628|gb|EOA32817.1| hypothetical protein
CARUB_v10016128mg [Capsella rubella]
Length = 634
Score = 124 bits (312), Expect = 1e-26
Identities = 54/80 (67%), Positives = 72/80 (90%)
Frame = +2
Query: 2 PNVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNK 181
P+ EHYGC+VD+LGR+G++D+A +F+++MP EPTA + GSLLGACR+H +V IGE+VG K
Sbjct: 397 PDTEHYGCIVDMLGRSGRIDEAFEFIKRMPSEPTAGVLGSLLGACRVHLSVDIGESVGRK 456
Query: 182 LLEMEPDNAGNYVILSNLYA 241
L+E+EP+NAGNYVILSNLYA
Sbjct: 457 LIEIEPENAGNYVILSNLYA 476
>ref|XP_002322694.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222867324|gb|EEF04455.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 586
Score = 124 bits (312), Expect = 1e-26
Identities = 55/78 (70%), Positives = 70/78 (89%)
Frame = +2
Query: 8 VEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNKLL 187
+EHYGC++DLLGRAG++++A + +++MP EPTAAIWGSLLGACR+H N IGE VG +LL
Sbjct: 351 IEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLL 410
Query: 188 EMEPDNAGNYVILSNLYA 241
E+EP+NAGNYVILSNLYA
Sbjct: 411 EIEPENAGNYVILSNLYA 428
>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 124 bits (311), Expect = 1e-26
Identities = 56/80 (70%), Positives = 70/80 (87%)
Frame = +2
Query: 2 PNVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNK 181
P +EHYGC+VDL GRAG++++A +F+++MP EPTAAIWGSLLGACR+H NV IGE V +
Sbjct: 816 PEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARR 875
Query: 182 LLEMEPDNAGNYVILSNLYA 241
LLE+E +NAGNYVILSNLYA
Sbjct: 876 LLEIESENAGNYVILSNLYA 895
>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 124 bits (311), Expect = 1e-26
Identities = 56/80 (70%), Positives = 70/80 (87%)
Frame = +2
Query: 2 PNVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNK 181
P +EHYGC+VDL GRAG++++A +F+++MP EPTAAIWGSLLGACR+H NV IGE V +
Sbjct: 349 PEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARR 408
Query: 182 LLEMEPDNAGNYVILSNLYA 241
LLE+E +NAGNYVILSNLYA
Sbjct: 409 LLEIESENAGNYVILSNLYA 428
>gb|ESW17642.1| hypothetical protein PHAVU_007G256700g [Phaseolus vulgaris]
Length = 633
Score = 123 bits (309), Expect = 2e-26
Identities = 54/80 (67%), Positives = 71/80 (88%)
Frame = +2
Query: 2 PNVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNK 181
P+ +HYGC+VDLLGRAG++++A +F+ ++P EP+AAIWG LLGAC +H NV IGE VG++
Sbjct: 396 PDTKHYGCVVDLLGRAGRVEEAFEFIRKLPFEPSAAIWGCLLGACNVHLNVDIGEFVGHR 455
Query: 182 LLEMEPDNAGNYVILSNLYA 241
LLE+EP+NAGNYVILSNLYA
Sbjct: 456 LLEIEPENAGNYVILSNLYA 475
>ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like
[Arabidopsis thaliana] gi|332641888|gb|AEE75409.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 628
Score = 122 bits (307), Expect = 4e-26
Identities = 53/80 (66%), Positives = 71/80 (88%)
Frame = +2
Query: 2 PNVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNK 181
P EHYGC+VD+LGRAG++D+A +F+++MP +PTA + GSLLGACR+H +V IGE+VG +
Sbjct: 391 PGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRR 450
Query: 182 LLEMEPDNAGNYVILSNLYA 241
L+E+EP+NAGNYVILSNLYA
Sbjct: 451 LIEIEPENAGNYVILSNLYA 470
>gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 122 bits (307), Expect = 4e-26
Identities = 53/79 (67%), Positives = 68/79 (86%)
Frame = +2
Query: 5 NVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNKL 184
N +HYGC++DLLGR+GQL+KAL +++MP +PT AIWGSLLGACR+H NV +GE V KL
Sbjct: 374 NTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKL 433
Query: 185 LEMEPDNAGNYVILSNLYA 241
++EP+NAGNYVILSN+YA
Sbjct: 434 FDIEPENAGNYVILSNIYA 452
>gb|EMT28838.1| hypothetical protein F775_05778 [Aegilops tauschii]
Length = 548
Score = 122 bits (306), Expect = 5e-26
Identities = 54/79 (68%), Positives = 66/79 (83%)
Frame = +2
Query: 5 NVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNKL 184
++ HYGC++DLLGR+G+L KAL ++ MP EPT AIWGSLLGACR+H NV +GE V KL
Sbjct: 312 SIGHYGCVIDLLGRSGRLQKALDLIQDMPFEPTPAIWGSLLGACRVHVNVSVGEVVAQKL 371
Query: 185 LEMEPDNAGNYVILSNLYA 241
L+MEP NAGNYVILSN+YA
Sbjct: 372 LDMEPGNAGNYVILSNIYA 390
>ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297328683|gb|EFH59102.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 627
Score = 122 bits (306), Expect = 5e-26
Identities = 53/80 (66%), Positives = 72/80 (90%)
Frame = +2
Query: 2 PNVEHYGCMVDLLGRAGQLDKALKFMEQMPCEPTAAIWGSLLGACRLHCNVGIGETVGNK 181
P+ EHYGC+VD+LGRAG++D+A +F+++MP +PTA + GSLLGACR+H +V IGE VG++
Sbjct: 390 PDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHR 449
Query: 182 LLEMEPDNAGNYVILSNLYA 241
L+E+EP+NAGNYVILSNLYA
Sbjct: 450 LIEIEPENAGNYVILSNLYA 469