BLASTX nr result

ID: Rheum21_contig00029430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00029430
         (312 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004298779.1| PREDICTED: ethylene-responsive transcription...    65   1e-08
ref|XP_002304466.1| AP2 domain-containing family protein [Populu...    64   3e-08
ref|XP_002280043.1| PREDICTED: ethylene-responsive transcription...    59   5e-07
ref|XP_002298066.1| AP2 domain-containing family protein [Populu...    59   5e-07
ref|XP_006857915.1| hypothetical protein AMTR_s00069p00140780 [A...    59   7e-07
gb|EMJ11676.1| hypothetical protein PRUPE_ppa026499mg [Prunus pe...    59   9e-07
ref|XP_004157231.1| PREDICTED: ethylene-responsive transcription...    58   1e-06
ref|XP_004140856.1| PREDICTED: ethylene-responsive transcription...    58   1e-06
gb|AGB07591.1| ethylene-responsive transcription factor 8 [Artem...    57   3e-06
gb|AFV60733.1| ethylene-responsive transcription factor 1 [Caric...    57   3e-06
ref|XP_006573759.1| PREDICTED: ethylene-responsive transcription...    56   4e-06
ref|XP_003570096.1| PREDICTED: ethylene-responsive transcription...    56   4e-06
gb|AHJ25963.1| dehydration responsive element binding transcript...    55   1e-05
ref|XP_004143932.1| PREDICTED: ethylene-responsive transcription...    55   1e-05
gb|ADJ67430.1| ethylene response factor 1 [Actinidia deliciosa]        55   1e-05

>ref|XP_004298779.1| PREDICTED: ethylene-responsive transcription factor ERF025-like
           [Fragaria vesca subsp. vesca]
          Length = 279

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 31/52 (59%), Positives = 39/52 (75%)
 Frame = +3

Query: 141 FVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPEDGGWPEDILGGDSLWNYD 296
           F+D EE+F M NL++DMA GM+VSPPR+  +PP D   PE   GG+SLWNYD
Sbjct: 229 FMDEEEIFGMPNLLVDMAEGMLVSPPRIN-SPPSDYDSPEYSDGGESLWNYD 279


>ref|XP_002304466.1| AP2 domain-containing family protein [Populus trichocarpa]
           gi|222841898|gb|EEE79445.1| AP2 domain-containing family
           protein [Populus trichocarpa]
          Length = 176

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 29/53 (54%), Positives = 39/53 (73%)
 Frame = +3

Query: 135 DAFVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPEDGGWPEDILGGDSLWNY 293
           + FVD E LFDM NL++DMAGGM++SPPR+ P+P +D     D   G+SLW+Y
Sbjct: 126 EEFVDEEALFDMPNLLVDMAGGMLLSPPRITPSPSDDSQGTSD---GESLWSY 175


>ref|XP_002280043.1| PREDICTED: ethylene-responsive transcription factor ERF025-like
           [Vitis vinifera]
          Length = 237

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/66 (46%), Positives = 42/66 (63%)
 Frame = +3

Query: 96  EVALDMESVGGLEDAFVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPEDGGWPEDILGG 275
           E   +  S+   ED F+D EEL +M NL++DMA GM+VSPPR+   P +D   PE+    
Sbjct: 174 EETTESSSLAAGEDQFIDEEELLNMPNLLVDMAEGMLVSPPRLKSQPSDDS--PEN-SDS 230

Query: 276 DSLWNY 293
           DSLW+Y
Sbjct: 231 DSLWSY 236


>ref|XP_002298066.1| AP2 domain-containing family protein [Populus trichocarpa]
           gi|222845324|gb|EEE82871.1| AP2 domain-containing family
           protein [Populus trichocarpa]
          Length = 177

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = +3

Query: 135 DAFVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPEDGGWPEDILGGDSLWNY 293
           + FVD E LFDM NL++DMAGGM++SPPR+   P +D     D   G+SLW+Y
Sbjct: 127 EEFVDEEALFDMPNLLVDMAGGMLLSPPRITSPPSDDSQGNSD---GESLWSY 176


>ref|XP_006857915.1| hypothetical protein AMTR_s00069p00140780 [Amborella trichopoda]
           gi|548862017|gb|ERN19382.1| hypothetical protein
           AMTR_s00069p00140780 [Amborella trichopoda]
          Length = 237

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +3

Query: 105 LDMESVGGLEDA-FVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPEDGGWPEDILGGDS 281
           L+ E+VG +++  F+D EELFDM +L++ MA GM+VSPPRM P P  D G  +   GG  
Sbjct: 177 LETENVGQIQEPEFLDEEELFDMPSLIVSMAEGMLVSPPRMDPPPENDNG--DSDSGG-- 232

Query: 282 LWNY 293
           LW+Y
Sbjct: 233 LWSY 236


>gb|EMJ11676.1| hypothetical protein PRUPE_ppa026499mg [Prunus persica]
          Length = 184

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
 Frame = +3

Query: 87  VAVEVALDMESVGGLEDAFVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPED-GGWPED 263
           V+  ++L   SVG     F+D EELF M NL++DMA GM+VSPPRM  +PP D    P +
Sbjct: 118 VSNSISLASSSVGD----FMDEEELFGMPNLLMDMAEGMLVSPPRMNDSPPSDYDDSPGN 173

Query: 264 ILGGDS-LWNY 293
             GG+S LW+Y
Sbjct: 174 SDGGESLLWSY 184


>ref|XP_004157231.1| PREDICTED: ethylene-responsive transcription factor ERF025-like
           [Cucumis sativus]
          Length = 142

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/59 (49%), Positives = 36/59 (61%)
 Frame = +3

Query: 117 SVGGLEDAFVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPEDGGWPEDILGGDSLWNY 293
           + G     FVD EEL +M NL++DMA GM+VSPPRM  +P  D   P    G D LW+Y
Sbjct: 83  ATGDCSGKFVDEEELLNMPNLLVDMAKGMLVSPPRM-KSPSSDDNSPNHSQGDDGLWSY 140


>ref|XP_004140856.1| PREDICTED: ethylene-responsive transcription factor ERF025-like
           [Cucumis sativus]
          Length = 192

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/59 (49%), Positives = 36/59 (61%)
 Frame = +3

Query: 117 SVGGLEDAFVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPEDGGWPEDILGGDSLWNY 293
           + G     FVD EEL +M NL++DMA GM+VSPPRM  +P  D   P    G D LW+Y
Sbjct: 133 ATGDCSGKFVDEEELLNMPNLLVDMAKGMLVSPPRM-KSPSSDDNSPNHSQGDDGLWSY 190


>gb|AGB07591.1| ethylene-responsive transcription factor 8 [Artemisia annua]
          Length = 191

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/53 (45%), Positives = 39/53 (73%)
 Frame = +3

Query: 135 DAFVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPEDGGWPEDILGGDSLWNY 293
           D ++D E++F M N++ DMA GM++SPPR+  +PP+D G   +  GG++LW+Y
Sbjct: 140 DQYMDHEDVFGMPNMLSDMAEGMLLSPPRINSSPPDD-GTDYNYSGGENLWDY 191


>gb|AFV60733.1| ethylene-responsive transcription factor 1 [Carica papaya]
          Length = 213

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/51 (52%), Positives = 36/51 (70%)
 Frame = +3

Query: 141 FVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPEDGGWPEDILGGDSLWNY 293
           F+D EEL +M NL++DMA GMMVSPPR+   P +D    E+   G+SLW+Y
Sbjct: 163 FIDEEELLNMPNLLVDMAEGMMVSPPRISSPPSDDS--QENFDHGESLWSY 211


>ref|XP_006573759.1| PREDICTED: ethylene-responsive transcription factor ERF026-like
           [Glycine max]
          Length = 183

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/59 (45%), Positives = 38/59 (64%)
 Frame = +3

Query: 117 SVGGLEDAFVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPEDGGWPEDILGGDSLWNY 293
           S    E  F+D E +F M +L++DMAGGM++SPPRM P PP D    +    G++LW+Y
Sbjct: 127 STSWFETDFIDEEVIFGMPSLLVDMAGGMLLSPPRMSP-PPSDNSLEKQ--NGETLWSY 182


>ref|XP_003570096.1| PREDICTED: ethylene-responsive transcription factor ERF025-like
           [Brachypodium distachyon]
          Length = 217

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
 Frame = +3

Query: 114 ESVGGLEDAFVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPEDGGWPEDILG-GDSLWN 290
           + +G   + F+D E +F+M  ++ +MA GMM+SPPR+ PT  ++  WP D  G G+SLW+
Sbjct: 156 KEIGNEGEEFMDEEAIFEMPQMLRNMAAGMMMSPPRLSPTASDE--WPADPSGAGESLWS 213

Query: 291 Y 293
           Y
Sbjct: 214 Y 214


>gb|AHJ25963.1| dehydration responsive element binding transcription factor [Morus
           notabilis] gi|587828822|gb|EXB19758.1|
           Ethylene-responsive transcription factor [Morus
           notabilis]
          Length = 261

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
 Frame = +3

Query: 141 FVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPEDGGW--PEDILGGDSLWNY 293
           +VD E LF M NL+++MA GM++SPPRM  +PP    +  P    GGDSLW Y
Sbjct: 208 YVDEEALFGMPNLLVEMAEGMLLSPPRMMESPPPSDEYYSPGSSDGGDSLWGY 260


>ref|XP_004143932.1| PREDICTED: ethylene-responsive transcription factor ERF026-like
           [Cucumis sativus] gi|449519924|ref|XP_004166984.1|
           PREDICTED: ethylene-responsive transcription factor
           ERF026-like [Cucumis sativus]
          Length = 252

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
 Frame = +3

Query: 81  KAVAVEVALDMESVGGLEDA--------FVDFEELFDMHNLMIDMAGGMMVSPPRMGPTP 236
           KAV    +     VG +ED         FVD EE+F M  L+ DMA GMMVSPPRM  +P
Sbjct: 174 KAVKKVSSTSSVDVGTMEDCSKKMRIEEFVDEEEIFGMPGLLADMAEGMMVSPPRMN-SP 232

Query: 237 PEDGGWPEDILGGDSLWNY 293
           P      E+  G +SLW+Y
Sbjct: 233 PLSDDLMENSDGTESLWSY 251


>gb|ADJ67430.1| ethylene response factor 1 [Actinidia deliciosa]
          Length = 249

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/53 (45%), Positives = 37/53 (69%)
 Frame = +3

Query: 135 DAFVDFEELFDMHNLMIDMAGGMMVSPPRMGPTPPEDGGWPEDILGGDSLWNY 293
           + F+D E +FDM N+++DMA G+++SPPRM   P +D     +  GGD+LW+Y
Sbjct: 198 EEFIDEEAIFDMPNMLVDMAEGILLSPPRMKSPPCDDDS--AESSGGDNLWSY 248


Top