BLASTX nr result
ID: Rheum21_contig00029278
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00029278
(372 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vit... 84 2e-14
ref|XP_004306591.1| PREDICTED: RING-H2 finger protein ATL78-like... 84 3e-14
ref|XP_006393284.1| hypothetical protein EUTSA_v10011772mg [Eutr... 83 4e-14
ref|XP_006393283.1| hypothetical protein EUTSA_v10011772mg [Eutr... 83 4e-14
ref|XP_006305976.1| hypothetical protein CARUB_v10011239mg [Caps... 82 1e-13
ref|XP_003526853.1| PREDICTED: RING-H2 finger protein ATL78-like... 78 1e-12
ref|NP_175349.1| RING-H2 finger protein ATL78 [Arabidopsis thali... 78 1e-12
ref|XP_002298709.2| zinc finger family protein [Populus trichoca... 77 2e-12
gb|EMJ13234.1| hypothetical protein PRUPE_ppa011240mg [Prunus pe... 77 2e-12
ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Rici... 77 2e-12
ref|XP_006578803.1| PREDICTED: RING-H2 finger protein ATL78-like... 77 3e-12
gb|ACU18824.1| unknown [Glycine max] 77 3e-12
gb|ACU18212.1| unknown [Glycine max] 77 3e-12
ref|XP_004502903.1| PREDICTED: RING-H2 finger protein ATL78-like... 76 4e-12
ref|XP_003602549.1| Ring-H2 zinc finger protein [Medicago trunca... 76 4e-12
gb|ESW09686.1| hypothetical protein PHAVU_009G147700g [Phaseolus... 76 5e-12
gb|AFK42323.1| unknown [Medicago truncatula] 76 5e-12
ref|XP_006371011.1| zinc finger family protein [Populus trichoca... 75 9e-12
ref|XP_002331879.1| predicted protein [Populus trichocarpa] 75 9e-12
ref|XP_006351048.1| PREDICTED: RING-H2 finger protein ATL78-like... 75 1e-11
>ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vitis vinifera]
gi|147833208|emb|CAN75293.1| hypothetical protein
VITISV_042413 [Vitis vinifera]
Length = 224
Score = 84.0 bits (206), Expect = 2e-14
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 17/98 (17%)
Frame = +1
Query: 118 MFASSSPSSQ---ELIRSLYNRRLLTQNEAASHPESYTTP--------------SNGFDA 246
M+AS+SPS Q +L+ Y+RRLL + P + + P SN FD
Sbjct: 1 MYASTSPSVQLFQDLVGDFYSRRLLLHSPLHESPATASPPATGNSHDSSEPYTGSNSFDT 60
Query: 247 NVVMVLSVLLCALICSLALNSLVRCALRCASFVSRDEN 360
NVVMVLSVLLCALICSL LNS++RCALRC+S V+ N
Sbjct: 61 NVVMVLSVLLCALICSLGLNSIIRCALRCSSLVASPGN 98
>ref|XP_004306591.1| PREDICTED: RING-H2 finger protein ATL78-like [Fragaria vesca subsp.
vesca]
Length = 235
Score = 83.6 bits (205), Expect = 3e-14
Identities = 46/97 (47%), Positives = 60/97 (61%), Gaps = 14/97 (14%)
Frame = +1
Query: 124 ASSSPSSQELIRSLYNRRLLTQN---------EAASHPESYTTPS-----NGFDANVVMV 261
A +S L+ Y+RRLL N + SH S ++P N FDANVVMV
Sbjct: 7 AFASHQLDHLVGDFYSRRLLLHNPLYPPPISPSSTSHDASSSSPDQYPGDNSFDANVVMV 66
Query: 262 LSVLLCALICSLALNSLVRCALRCASFVSRDENDNDN 372
LSVLLCALICSL LNS+++CALRC+SFV+ + + + N
Sbjct: 67 LSVLLCALICSLGLNSIIKCALRCSSFVAAESSSSSN 103
>ref|XP_006393284.1| hypothetical protein EUTSA_v10011772mg [Eutrema salsugineum]
gi|557089862|gb|ESQ30570.1| hypothetical protein
EUTSA_v10011772mg [Eutrema salsugineum]
Length = 213
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = +1
Query: 145 QELIRSLYNRRLLTQNEAASHPESYTTPSNGFDANVVMVLSVLLCALICSLALNSLVRCA 324
Q+++ S Y+RRLL + P Y +N FDANVVMVLSVLLCAL+CSL LNS++RCA
Sbjct: 17 QDILVSSYSRRLLLDQSPSPAPSPYAADNN-FDANVVMVLSVLLCALVCSLGLNSIIRCA 75
Query: 325 LRCASFVSRDENDN 366
LRC+S V + N
Sbjct: 76 LRCSSLVPSEAGGN 89
>ref|XP_006393283.1| hypothetical protein EUTSA_v10011772mg [Eutrema salsugineum]
gi|557089861|gb|ESQ30569.1| hypothetical protein
EUTSA_v10011772mg [Eutrema salsugineum]
Length = 154
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = +1
Query: 145 QELIRSLYNRRLLTQNEAASHPESYTTPSNGFDANVVMVLSVLLCALICSLALNSLVRCA 324
Q+++ S Y+RRLL + P Y +N FDANVVMVLSVLLCAL+CSL LNS++RCA
Sbjct: 17 QDILVSSYSRRLLLDQSPSPAPSPYAADNN-FDANVVMVLSVLLCALVCSLGLNSIIRCA 75
Query: 325 LRCASFVSRDENDN 366
LRC+S V + N
Sbjct: 76 LRCSSLVPSEAGGN 89
>ref|XP_006305976.1| hypothetical protein CARUB_v10011239mg [Capsella rubella]
gi|482574687|gb|EOA38874.1| hypothetical protein
CARUB_v10011239mg [Capsella rubella]
Length = 216
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Frame = +1
Query: 145 QELIRSLYNRRLLTQNEAASHPESYTTP---SNGFDANVVMVLSVLLCALICSLALNSLV 315
QE++ S Y+R+LL N S P +P N FDANVVMVLSVLLCAL+CSL LNS++
Sbjct: 17 QEILGSSYSRKLLFHNHDQS-PTPAPSPYAGDNNFDANVVMVLSVLLCALVCSLGLNSII 75
Query: 316 RCALRCASFVSRDENDN 366
RCALRC++ V + DN
Sbjct: 76 RCALRCSNLVPSEAGDN 92
>ref|XP_003526853.1| PREDICTED: RING-H2 finger protein ATL78-like [Glycine max]
Length = 236
Score = 78.2 bits (191), Expect = 1e-12
Identities = 48/95 (50%), Positives = 59/95 (62%), Gaps = 14/95 (14%)
Frame = +1
Query: 130 SSPSSQELIRSLYNRRLLTQ----NEAASHPESYTTPSN-------GFDANVVMVLSVLL 276
+SP +L Y+RRLL N++A P S S FDANVVMVLSVLL
Sbjct: 10 TSPLLHDLENFHYSRRLLLHSPYLNQSAKPPRSSHDSSTETYLGDGNFDANVVMVLSVLL 69
Query: 277 CALICSLALNSLVRCALRCASFVSRDE---NDNDN 372
CALICSL LNS++RCALRC++FV D N+N+N
Sbjct: 70 CALICSLGLNSIIRCALRCSNFVVSDSVATNNNNN 104
>ref|NP_175349.1| RING-H2 finger protein ATL78 [Arabidopsis thaliana]
gi|68565178|sp|Q6NQG7.1|ATL78_ARATH RecName:
Full=RING-H2 finger protein ATL78
gi|34365601|gb|AAQ65112.1| At1g49230 [Arabidopsis
thaliana] gi|51970612|dbj|BAD43998.1| putative RING zinc
finger protein [Arabidopsis thaliana]
gi|51971166|dbj|BAD44275.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|332194286|gb|AEE32407.1| RING-H2 finger protein ATL78
[Arabidopsis thaliana]
Length = 219
Score = 77.8 bits (190), Expect = 1e-12
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Frame = +1
Query: 145 QELIRSLYNRRLL--TQNEAASHPESYTTPSNGFDANVVMVLSVLLCALICSLALNSLVR 318
QE++ S Y+R+LL T +++ + S N FDANVVMVLSVLLCAL+CSL LNS++R
Sbjct: 19 QEILGSSYSRKLLFHTHDQSPTPAPSPYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIR 78
Query: 319 CALRCASFVSRDENDNDN 372
CALRC++ V E DN
Sbjct: 79 CALRCSNLVP-SEAGGDN 95
>ref|XP_002298709.2| zinc finger family protein [Populus trichocarpa]
gi|550348655|gb|EEE83514.2| zinc finger family protein
[Populus trichocarpa]
Length = 225
Score = 77.4 bits (189), Expect = 2e-12
Identities = 43/88 (48%), Positives = 55/88 (62%), Gaps = 14/88 (15%)
Frame = +1
Query: 145 QELIRSLYNRRLLTQ------NEAASHP--------ESYTTPSNGFDANVVMVLSVLLCA 282
Q + Y+RRLL + A+ P E+YT+ N FDANVVMVLSVLLCA
Sbjct: 13 QGFLGDFYSRRLLLHTPLYQSSNTATPPAPGNTASSETYTSTDNSFDANVVMVLSVLLCA 72
Query: 283 LICSLALNSLVRCALRCASFVSRDENDN 366
LICSL LNS++RCALRC++ V+ + N
Sbjct: 73 LICSLGLNSIIRCALRCSNLVASESAAN 100
>gb|EMJ13234.1| hypothetical protein PRUPE_ppa011240mg [Prunus persica]
Length = 218
Score = 77.0 bits (188), Expect = 2e-12
Identities = 44/83 (53%), Positives = 51/83 (61%), Gaps = 15/83 (18%)
Frame = +1
Query: 169 NRRLLTQN------EAASHPESYTTP---------SNGFDANVVMVLSVLLCALICSLAL 303
+RRLL N AS P S T P N FDANVVMVLSVLLCALICSL L
Sbjct: 12 SRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGL 71
Query: 304 NSLVRCALRCASFVSRDENDNDN 372
NS+++CALRC+SFV + + N
Sbjct: 72 NSIIKCALRCSSFVESRSSSSSN 94
>ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Ricinus communis]
gi|223538562|gb|EEF40166.1| RING-H2 finger protein
ATL1L, putative [Ricinus communis]
Length = 223
Score = 77.0 bits (188), Expect = 2e-12
Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 14/101 (13%)
Frame = +1
Query: 112 ITMFASSSPSSQELIRSLYNRRLLTQNEAASHPESYTTPS--------------NGFDAN 249
+T S++ Q+ Y+RRLL P + P+ N FDAN
Sbjct: 1 MTTSTSTAQLFQDFQGDFYSRRLLLHTPLYHSPTAAAPPAPGYSQEASEPYTGNNSFDAN 60
Query: 250 VVMVLSVLLCALICSLALNSLVRCALRCASFVSRDENDNDN 372
VVMVLSVLLCALICSL LNS++RCALRC+S V+ DN +
Sbjct: 61 VVMVLSVLLCALICSLGLNSIIRCALRCSSLVASRSADNSS 101
>ref|XP_006578803.1| PREDICTED: RING-H2 finger protein ATL78-like [Glycine max]
Length = 239
Score = 76.6 bits (187), Expect = 3e-12
Identities = 47/91 (51%), Positives = 59/91 (64%), Gaps = 10/91 (10%)
Frame = +1
Query: 130 SSPSSQELIRSLYNRRLL------TQNE---AASHPESYTTPSNG-FDANVVMVLSVLLC 279
+SP +L Y+RRLL Q+E +SH + T +G FDANVVMVLSVLLC
Sbjct: 10 TSPLLHDLENFHYSRRLLLHSPYLNQSEKPPTSSHDSTETYLGDGNFDANVVMVLSVLLC 69
Query: 280 ALICSLALNSLVRCALRCASFVSRDENDNDN 372
ALICSL LNS++RCALRC++FV D +N
Sbjct: 70 ALICSLGLNSIIRCALRCSNFVVSDSVATNN 100
>gb|ACU18824.1| unknown [Glycine max]
Length = 239
Score = 76.6 bits (187), Expect = 3e-12
Identities = 47/91 (51%), Positives = 59/91 (64%), Gaps = 10/91 (10%)
Frame = +1
Query: 130 SSPSSQELIRSLYNRRLL------TQNE---AASHPESYTTPSNG-FDANVVMVLSVLLC 279
+SP +L Y+RRLL Q+E +SH + T +G FDANVVMVLSVLLC
Sbjct: 10 TSPLLHDLENFHYSRRLLLHSPYLNQSEKPPTSSHDSTETYLGDGNFDANVVMVLSVLLC 69
Query: 280 ALICSLALNSLVRCALRCASFVSRDENDNDN 372
ALICSL LNS++RCALRC++FV D +N
Sbjct: 70 ALICSLGLNSIIRCALRCSNFVVSDSVATNN 100
>gb|ACU18212.1| unknown [Glycine max]
Length = 236
Score = 76.6 bits (187), Expect = 3e-12
Identities = 47/95 (49%), Positives = 58/95 (61%), Gaps = 14/95 (14%)
Frame = +1
Query: 130 SSPSSQELIRSLYNRRLLTQ----NEAASHPESYTTPSN-------GFDANVVMVLSVLL 276
+SP +L Y+RRLL N++A P S S FDANVVMVLSVLL
Sbjct: 10 TSPLLHDLENFHYSRRLLLHSPYLNQSAKPPRSSHDSSTETYLGDGNFDANVVMVLSVLL 69
Query: 277 CALICSLALNSLVRCALRCASFVSRDE---NDNDN 372
C LICSL LNS++RCALRC++FV D N+N+N
Sbjct: 70 CVLICSLGLNSIIRCALRCSNFVVSDSVATNNNNN 104
>ref|XP_004502903.1| PREDICTED: RING-H2 finger protein ATL78-like [Cicer arietinum]
Length = 225
Score = 76.3 bits (186), Expect = 4e-12
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 14/94 (14%)
Frame = +1
Query: 133 SPSSQELIRSLYNRRLL--------------TQNEAASHPESYTTPSNGFDANVVMVLSV 270
SP EL+ + ++RRLL T N ++ SY N FDANV+MVLSV
Sbjct: 9 SPLLHELVENFHSRRLLLHSPINQPSNPPISTNNHDSTSESSYLGDGN-FDANVIMVLSV 67
Query: 271 LLCALICSLALNSLVRCALRCASFVSRDENDNDN 372
LLCALICSL LNS++RCALRC++ V + +N
Sbjct: 68 LLCALICSLGLNSIIRCALRCSNLVMMSSDHLEN 101
>ref|XP_003602549.1| Ring-H2 zinc finger protein [Medicago truncatula]
gi|355491597|gb|AES72800.1| Ring-H2 zinc finger protein
[Medicago truncatula]
Length = 240
Score = 76.3 bits (186), Expect = 4e-12
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 13/92 (14%)
Frame = +1
Query: 133 SPSSQELIRSLYNRRLLTQNEAASHP-----------ESYTTPSNGFDANVVMVLSVLLC 279
SP EL+ + ++RRLL + +++P ES FDANVVMVLSVLLC
Sbjct: 9 SPLLHELVENFHSRRLLLHSSNSANPPISTSIHDSTKESSYAGDGNFDANVVMVLSVLLC 68
Query: 280 ALICSLALNSLVRCALRCASFV--SRDENDND 369
ALICSL LNS++RCAL+C++ V S D + N+
Sbjct: 69 ALICSLCLNSIIRCALKCSNLVVMSGDRSANN 100
>gb|ESW09686.1| hypothetical protein PHAVU_009G147700g [Phaseolus vulgaris]
Length = 226
Score = 75.9 bits (185), Expect = 5e-12
Identities = 45/84 (53%), Positives = 57/84 (67%), Gaps = 9/84 (10%)
Frame = +1
Query: 130 SSPSSQELIRSLYNRRLLTQNE--------AASHPESYTTPSNG-FDANVVMVLSVLLCA 282
+SP +L S ++RRLL + A+SH + T +G FDANVVMVLSVLLCA
Sbjct: 9 TSPLHHDL-HSFHSRRLLLHSPLNQSAKPPASSHDSTETYLGDGNFDANVVMVLSVLLCA 67
Query: 283 LICSLALNSLVRCALRCASFVSRD 354
LICSL LNS++RCALRC++FV D
Sbjct: 68 LICSLGLNSIIRCALRCSNFVVSD 91
>gb|AFK42323.1| unknown [Medicago truncatula]
Length = 228
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 11/82 (13%)
Frame = +1
Query: 133 SPSSQELIRSLYNRRLLTQNEAASHP-----------ESYTTPSNGFDANVVMVLSVLLC 279
SP EL+ + ++RRLL + +++P ES FDANVVMVLSVLLC
Sbjct: 9 SPLLHELVENFHSRRLLLHSSNSANPPISTSIHDSTKESSYAGDGNFDANVVMVLSVLLC 68
Query: 280 ALICSLALNSLVRCALRCASFV 345
ALICSL LNS++RCAL+C++ V
Sbjct: 69 ALICSLCLNSIIRCALKCSNLV 90
>ref|XP_006371011.1| zinc finger family protein [Populus trichocarpa]
gi|550316594|gb|ERP48808.1| zinc finger family protein
[Populus trichocarpa]
Length = 225
Score = 75.1 bits (183), Expect = 9e-12
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 16/99 (16%)
Frame = +1
Query: 118 MFASSSPSS--QELIRSLYNRRLLTQNEAASHPESYTTPSNG--------------FDAN 249
M AS+S + Q+ + Y+RRLL N + T P+ G FDAN
Sbjct: 1 MSASTSTTQLFQDFLGDFYSRRLLLHNPLYQSTNTATPPAPGNSAPSEPSTGTGSSFDAN 60
Query: 250 VVMVLSVLLCALICSLALNSLVRCALRCASFVSRDENDN 366
VVMVLSVLLCALICSL LNS++RCALRC++ + + N
Sbjct: 61 VVMVLSVLLCALICSLGLNSIIRCALRCSNIAASESAAN 99
>ref|XP_002331879.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 75.1 bits (183), Expect = 9e-12
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 16/99 (16%)
Frame = +1
Query: 118 MFASSSPSS--QELIRSLYNRRLLTQNEAASHPESYTTPSNG--------------FDAN 249
M AS+S + Q+ + Y+RRLL N + T P+ G FDAN
Sbjct: 1 MSASTSTTQLFQDFLGDFYSRRLLLHNPLYQSTNTATPPAPGNSAPSEPSTGTGSSFDAN 60
Query: 250 VVMVLSVLLCALICSLALNSLVRCALRCASFVSRDENDN 366
VVMVLSVLLCALICSL LNS++RCALRC++ + + N
Sbjct: 61 VVMVLSVLLCALICSLGLNSIIRCALRCSNIAASESAAN 99
>ref|XP_006351048.1| PREDICTED: RING-H2 finger protein ATL78-like [Solanum tuberosum]
Length = 226
Score = 74.7 bits (182), Expect = 1e-11
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 9/83 (10%)
Frame = +1
Query: 145 QELIRSL-YNRRLLTQNEAASHPESYTTPS--------NGFDANVVMVLSVLLCALICSL 297
Q+ +++L Y+RRLL H ++ P+ N FDA+VVMVLSVLLCALICSL
Sbjct: 11 QDFMKNLQYSRRLLLPATPQYHHDTTLAPTDLSQGDTTNTFDAHVVMVLSVLLCALICSL 70
Query: 298 ALNSLVRCALRCASFVSRDENDN 366
LNS++RCALRC S VS ++ +
Sbjct: 71 GLNSIIRCALRCTSLVSESDSSS 93