BLASTX nr result

ID: Rheum21_contig00029201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00029201
         (386 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC20033.1| F-box/kelch-repeat protein [Morus notabilis]            55   1e-05

>gb|EXC20033.1| F-box/kelch-repeat protein [Morus notabilis]
          Length = 402

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 41/116 (35%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
 Frame = +2

Query: 71  WFTNLPELGHVIVSNPSTRKCH-----EILPEPEDSGCFGVEIGLGYDPLVKDYKLVKLV 235
           WF      G + + NPS  +        +LPE   SG      G GYD    DYK VKL 
Sbjct: 137 WFNRSGFCGEIFLCNPSLNEFKLLHTPSLLPEFWPSG-----FGFGYDARANDYKFVKL- 190

Query: 236 FESVV-----RVAIYTLGAGSWKSIRFQGKGCSWHWVSYCIA-TKKVYLQGSLYFI 385
           F S       R  +YTLG  SWK I+   KG       +C+A  K VY +G  Y++
Sbjct: 191 FRSAYNPIASRALVYTLGIDSWKEIKMDLKG------KFCLADAKGVYCRGVYYWV 240


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