BLASTX nr result
ID: Rheum21_contig00028418
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00028418
(511 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321123.2| hypothetical protein POPTR_0014s15030g [Popu... 115 5e-24
ref|XP_006375522.1| hypothetical protein POPTR_0014s15060g [Popu... 113 2e-23
gb|EXC23115.1| Glutamate receptor 3.4 [Morus notabilis] 108 6e-22
ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinu... 108 1e-21
ref|XP_004289164.1| PREDICTED: glutamate receptor 3.4-like [Frag... 106 3e-21
ref|XP_002321124.1| Glutamate receptor 3.5 precursor family prot... 106 3e-21
ref|XP_006367285.1| PREDICTED: glutamate receptor 3.4-like isofo... 106 4e-21
ref|XP_006447544.1| hypothetical protein CICLE_v10014175mg [Citr... 105 8e-21
ref|XP_006447543.1| hypothetical protein CICLE_v10014175mg [Citr... 105 8e-21
gb|EMJ18262.1| hypothetical protein PRUPE_ppa001079mg [Prunus pe... 105 8e-21
ref|XP_002301627.1| Glutamate receptor 3.5 precursor family prot... 103 2e-20
ref|XP_003563011.1| PREDICTED: glutamate receptor 3.4-like [Brac... 102 4e-20
ref|XP_004243468.1| PREDICTED: glutamate receptor 3.4-like [Sola... 102 7e-20
dbj|BAL15055.1| glutamate receptor 3.2 [Solanum lycopersicum] 102 7e-20
sp|Q9SW97.2|GLR35_ARATH RecName: Full=Glutamate receptor 3.5; Al... 101 1e-19
ref|NP_001189655.1| glutamate receptor 3.5 [Arabidopsis thaliana... 101 1e-19
ref|XP_002273744.2| PREDICTED: glutamate receptor 3.4-like [Viti... 100 2e-19
emb|CBI28943.3| unnamed protein product [Vitis vinifera] 100 2e-19
emb|CAN66741.1| hypothetical protein VITISV_021644 [Vitis vinifera] 100 2e-19
dbj|BAC42828.1| putative ligand-gated ion channel protein [Arabi... 100 3e-19
>ref|XP_002321123.2| hypothetical protein POPTR_0014s15030g [Populus trichocarpa]
gi|550324236|gb|EEE99438.2| hypothetical protein
POPTR_0014s15030g [Populus trichocarpa]
Length = 964
Score = 115 bits (289), Expect = 5e-24
Identities = 64/102 (62%), Positives = 72/102 (70%), Gaps = 13/102 (12%)
Frame = -3
Query: 269 RALLLWVLLVTGIW-------------GFATGASSPSSSRPEGVNIGALFTFNSVIGRAV 129
R LLL +LL+TGI G T SS SS RP NIG+LFTF+SVIGRA
Sbjct: 22 RVLLLLLLLITGICVPMEVVFGQAAANGNGTSVSSSSSPRPSVANIGSLFTFDSVIGRAA 81
Query: 128 KPAIQAAIDDVNSDSSVLPGTRLNLIFHDTNCSGFLGTMEAL 3
PAI AA+DDVNSD +VLPGTRLNLI H+TNCSGFLGT+EAL
Sbjct: 82 GPAIAAAVDDVNSDPTVLPGTRLNLISHNTNCSGFLGTVEAL 123
>ref|XP_006375522.1| hypothetical protein POPTR_0014s15060g [Populus trichocarpa]
gi|550324239|gb|ERP53319.1| hypothetical protein
POPTR_0014s15060g [Populus trichocarpa]
Length = 137
Score = 113 bits (283), Expect = 2e-23
Identities = 62/102 (60%), Positives = 71/102 (69%), Gaps = 13/102 (12%)
Frame = -3
Query: 269 RALLLWVLLVTGIW-------------GFATGASSPSSSRPEGVNIGALFTFNSVIGRAV 129
R LLL +LL+TGI G T SS SS RP NIG+LFTF+SVIGRA
Sbjct: 22 RVLLLLLLLITGICVPMEVVFGQAAANGNGTSVSSSSSPRPSVANIGSLFTFDSVIGRAA 81
Query: 128 KPAIQAAIDDVNSDSSVLPGTRLNLIFHDTNCSGFLGTMEAL 3
PAI AA+DDVNSD +VLPGTRLNLI H+TNCSGFLGT+E +
Sbjct: 82 GPAIAAAVDDVNSDPTVLPGTRLNLISHNTNCSGFLGTVEGI 123
>gb|EXC23115.1| Glutamate receptor 3.4 [Morus notabilis]
Length = 939
Score = 108 bits (271), Expect = 6e-22
Identities = 51/72 (70%), Positives = 62/72 (86%)
Frame = -3
Query: 218 TGASSPSSSRPEGVNIGALFTFNSVIGRAVKPAIQAAIDDVNSDSSVLPGTRLNLIFHDT 39
TG ++ SSSRP VNIGALFT+NS IGR+ KPAI AA+DDVN DSS+L GT+LN+IFHDT
Sbjct: 51 TGNATVSSSRPRVVNIGALFTYNSAIGRSAKPAILAAVDDVNKDSSILKGTKLNVIFHDT 110
Query: 38 NCSGFLGTMEAL 3
NCS F+GT+E+L
Sbjct: 111 NCSAFMGTVESL 122
>ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinus communis]
gi|223536548|gb|EEF38194.1| glutamate receptor 3 plant,
putative [Ricinus communis]
Length = 938
Score = 108 bits (269), Expect = 1e-21
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = -3
Query: 200 SSSRPEGVNIGALFTFNSVIGRAVKPAIQAAIDDVNSDSSVLPGTRLNLIFHDTNCSGFL 21
SSSRP VNIGALFT NSVIGRA KPAI AA+ DVNSDSS+LPGT+LNLI DTNCSGF+
Sbjct: 31 SSSRPSVVNIGALFTINSVIGRAAKPAIAAAVGDVNSDSSILPGTKLNLIVQDTNCSGFI 90
Query: 20 GTMEAL 3
GT+EAL
Sbjct: 91 GTIEAL 96
>ref|XP_004289164.1| PREDICTED: glutamate receptor 3.4-like [Fragaria vesca subsp.
vesca]
Length = 940
Score = 106 bits (265), Expect = 3e-21
Identities = 51/66 (77%), Positives = 57/66 (86%)
Frame = -3
Query: 200 SSSRPEGVNIGALFTFNSVIGRAVKPAIQAAIDDVNSDSSVLPGTRLNLIFHDTNCSGFL 21
SS RP +N GALFTFNS IGR+ KPAI AAID+VNSDSSVL GT+L +IFHDTNCSGFL
Sbjct: 37 SSKRPSSLNFGALFTFNSAIGRSAKPAILAAIDEVNSDSSVLKGTKLKIIFHDTNCSGFL 96
Query: 20 GTMEAL 3
GT+EAL
Sbjct: 97 GTVEAL 102
>ref|XP_002321124.1| Glutamate receptor 3.5 precursor family protein [Populus
trichocarpa] gi|222861897|gb|EEE99439.1| Glutamate
receptor 3.5 precursor family protein [Populus
trichocarpa]
Length = 110
Score = 106 bits (265), Expect = 3e-21
Identities = 53/73 (72%), Positives = 59/73 (80%)
Frame = -3
Query: 227 GFATGASSPSSSRPEGVNIGALFTFNSVIGRAVKPAIQAAIDDVNSDSSVLPGTRLNLIF 48
G T SS SS RP NIG+LFTF+SVIGRA PAI AA+DDVNSD +VLPGTRLNLI
Sbjct: 12 GNGTSVSSSSSPRPSVANIGSLFTFDSVIGRAAGPAIAAAVDDVNSDPTVLPGTRLNLIS 71
Query: 47 HDTNCSGFLGTME 9
H+TNCSGFLGT+E
Sbjct: 72 HNTNCSGFLGTVE 84
>ref|XP_006367285.1| PREDICTED: glutamate receptor 3.4-like isoform X1 [Solanum
tuberosum] gi|565403685|ref|XP_006367286.1| PREDICTED:
glutamate receptor 3.4-like isoform X2 [Solanum
tuberosum]
Length = 941
Score = 106 bits (264), Expect = 4e-21
Identities = 57/96 (59%), Positives = 74/96 (77%), Gaps = 11/96 (11%)
Frame = -3
Query: 257 LWVLLVTGIWGFA---------TGASSPSSS--RPEGVNIGALFTFNSVIGRAVKPAIQA 111
+++LLV+ IW A T A++P SS RP+ VN+GALFT NSVIGR+ +PA+ A
Sbjct: 10 VFLLLVSWIWPLAVLGGTGNNTTNATAPLSSFSRPKVVNVGALFTSNSVIGRSAEPALVA 69
Query: 110 AIDDVNSDSSVLPGTRLNLIFHDTNCSGFLGTMEAL 3
AI+DVNSDSS+L GT+LNLIF DTNCSGF+GT++AL
Sbjct: 70 AINDVNSDSSILRGTKLNLIFQDTNCSGFVGTVDAL 105
>ref|XP_006447544.1| hypothetical protein CICLE_v10014175mg [Citrus clementina]
gi|567910465|ref|XP_006447546.1| hypothetical protein
CICLE_v10014175mg [Citrus clementina]
gi|557550155|gb|ESR60784.1| hypothetical protein
CICLE_v10014175mg [Citrus clementina]
gi|557550157|gb|ESR60786.1| hypothetical protein
CICLE_v10014175mg [Citrus clementina]
Length = 822
Score = 105 bits (261), Expect = 8e-21
Identities = 56/86 (65%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = -3
Query: 257 LWVLL-VTGIWGFATGASSPSSSRPEGVNIGALFTFNSVIGRAVKPAIQAAIDDVNSDSS 81
+WV + V G G G S SSSRP V IGALFT++SVIGRA PAI AA+DDVNSD S
Sbjct: 26 MWVPMEVIGRTG--NGNVSSSSSRPSSVRIGALFTYDSVIGRAAGPAIAAAVDDVNSDPS 83
Query: 80 VLPGTRLNLIFHDTNCSGFLGTMEAL 3
+LPGT LN + DTNCSGF+GTMEAL
Sbjct: 84 ILPGTTLNFVIRDTNCSGFVGTMEAL 109
>ref|XP_006447543.1| hypothetical protein CICLE_v10014175mg [Citrus clementina]
gi|567910463|ref|XP_006447545.1| hypothetical protein
CICLE_v10014175mg [Citrus clementina]
gi|568830837|ref|XP_006469691.1| PREDICTED: glutamate
receptor 3.4-like [Citrus sinensis]
gi|557550154|gb|ESR60783.1| hypothetical protein
CICLE_v10014175mg [Citrus clementina]
gi|557550156|gb|ESR60785.1| hypothetical protein
CICLE_v10014175mg [Citrus clementina]
Length = 945
Score = 105 bits (261), Expect = 8e-21
Identities = 56/86 (65%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = -3
Query: 257 LWVLL-VTGIWGFATGASSPSSSRPEGVNIGALFTFNSVIGRAVKPAIQAAIDDVNSDSS 81
+WV + V G G G S SSSRP V IGALFT++SVIGRA PAI AA+DDVNSD S
Sbjct: 26 MWVPMEVIGRTG--NGNVSSSSSRPSSVRIGALFTYDSVIGRAAGPAIAAAVDDVNSDPS 83
Query: 80 VLPGTRLNLIFHDTNCSGFLGTMEAL 3
+LPGT LN + DTNCSGF+GTMEAL
Sbjct: 84 ILPGTTLNFVIRDTNCSGFVGTMEAL 109
>gb|EMJ18262.1| hypothetical protein PRUPE_ppa001079mg [Prunus persica]
Length = 916
Score = 105 bits (261), Expect = 8e-21
Identities = 50/65 (76%), Positives = 56/65 (86%)
Frame = -3
Query: 197 SSRPEGVNIGALFTFNSVIGRAVKPAIQAAIDDVNSDSSVLPGTRLNLIFHDTNCSGFLG 18
S+RP +NIGALFT NSVIGRA KPAI AAIDDVNSD S+LPGT+L +I HDTNCS FLG
Sbjct: 14 STRPSSLNIGALFTLNSVIGRAAKPAIYAAIDDVNSDPSILPGTKLEVILHDTNCSAFLG 73
Query: 17 TMEAL 3
T+EAL
Sbjct: 74 TVEAL 78
>ref|XP_002301627.1| Glutamate receptor 3.5 precursor family protein [Populus
trichocarpa] gi|222843353|gb|EEE80900.1| Glutamate
receptor 3.5 precursor family protein [Populus
trichocarpa]
Length = 956
Score = 103 bits (257), Expect = 2e-20
Identities = 50/75 (66%), Positives = 59/75 (78%)
Frame = -3
Query: 227 GFATGASSPSSSRPEGVNIGALFTFNSVIGRAVKPAIQAAIDDVNSDSSVLPGTRLNLIF 48
G T SS SSSRP NIG L+T++SVIG+A PAI AA+DDVNSD ++LPGTRLNLI
Sbjct: 42 GNGTAVSSSSSSRPSVANIGTLYTYDSVIGKAAGPAIAAAVDDVNSDPTILPGTRLNLIS 101
Query: 47 HDTNCSGFLGTMEAL 3
H+TNCSGFL T+E L
Sbjct: 102 HNTNCSGFLATVEVL 116
>ref|XP_003563011.1| PREDICTED: glutamate receptor 3.4-like [Brachypodium distachyon]
Length = 925
Score = 102 bits (255), Expect = 4e-20
Identities = 58/96 (60%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Frame = -3
Query: 287 LDSSAMRALLLWVLLVTGIWGFATGASSPSS-SRPEGVNIGALFTFNSVIGRAVKPAIQA 111
+ SS + ALLL V + G G A S + SRP V IGALFTF+SVIGRAVKPAI+
Sbjct: 1 MSSSHLAALLLCVCIFAG-GGIADSQSGTNGLSRPTEVRIGALFTFDSVIGRAVKPAIEL 59
Query: 110 AIDDVNSDSSVLPGTRLNLIFHDTNCSGFLGTMEAL 3
AI DVN+D SVL GTRL+++ DTNCSGF+GT+EAL
Sbjct: 60 AIADVNADPSVLSGTRLSVLMQDTNCSGFVGTIEAL 95
>ref|XP_004243468.1| PREDICTED: glutamate receptor 3.4-like [Solanum lycopersicum]
Length = 941
Score = 102 bits (253), Expect = 7e-20
Identities = 55/103 (53%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Frame = -3
Query: 293 AHLDSSAMRALLLWVLLVTGIWGFA----TGASSPSSS--RPEGVNIGALFTFNSVIGRA 132
A+L L+ W+ + + G T A++P SS RP+ VN+GALFT NSVIGR+
Sbjct: 3 AYLRKRVFLLLVSWIWVPLAVLGGTGNNTTNATAPLSSFSRPKVVNVGALFTANSVIGRS 62
Query: 131 VKPAIQAAIDDVNSDSSVLPGTRLNLIFHDTNCSGFLGTMEAL 3
+PA+ AAI+DVNSD S+L GT+LNLIF DTNCSGF+GT++AL
Sbjct: 63 AEPALVAAINDVNSDYSILRGTKLNLIFQDTNCSGFVGTVDAL 105
>dbj|BAL15055.1| glutamate receptor 3.2 [Solanum lycopersicum]
Length = 934
Score = 102 bits (253), Expect = 7e-20
Identities = 55/103 (53%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Frame = -3
Query: 293 AHLDSSAMRALLLWVLLVTGIWGFA----TGASSPSSS--RPEGVNIGALFTFNSVIGRA 132
A+L L+ W+ + + G T A++P SS RP+ VN+GALFT NSVIGR+
Sbjct: 3 AYLRKRVFLLLVSWIWVPLAVLGGTGNNTTNATAPLSSFSRPKVVNVGALFTANSVIGRS 62
Query: 131 VKPAIQAAIDDVNSDSSVLPGTRLNLIFHDTNCSGFLGTMEAL 3
+PA+ AAI+DVNSD S+L GT+LNLIF DTNCSGF+GT++AL
Sbjct: 63 AEPALVAAINDVNSDYSILRGTKLNLIFQDTNCSGFVGTVDAL 105
>sp|Q9SW97.2|GLR35_ARATH RecName: Full=Glutamate receptor 3.5; AltName: Full=Ionotropic
glutamate receptor GLR6; AltName: Full=Ligand-gated ion
channel 3.5; Flags: Precursor
Length = 953
Score = 101 bits (251), Expect = 1e-19
Identities = 49/85 (57%), Positives = 63/85 (74%)
Frame = -3
Query: 257 LWVLLVTGIWGFATGASSPSSSRPEGVNIGALFTFNSVIGRAVKPAIQAAIDDVNSDSSV 78
LWVL + G + +S SSS P VN+GALFT++S IGRA K A AAI+D+N+D S+
Sbjct: 22 LWVLPIQGAGRESFSRNSSSSSLPSSVNVGALFTYDSFIGRAAKLAFVAAIEDINADQSI 81
Query: 77 LPGTRLNLIFHDTNCSGFLGTMEAL 3
L GT+LN++F DTNCSGF+GTM AL
Sbjct: 82 LRGTKLNIVFQDTNCSGFVGTMGAL 106
>ref|NP_001189655.1| glutamate receptor 3.5 [Arabidopsis thaliana]
gi|330253584|gb|AEC08678.1| glutamate receptor 3.5
[Arabidopsis thaliana]
Length = 898
Score = 101 bits (251), Expect = 1e-19
Identities = 49/85 (57%), Positives = 63/85 (74%)
Frame = -3
Query: 257 LWVLLVTGIWGFATGASSPSSSRPEGVNIGALFTFNSVIGRAVKPAIQAAIDDVNSDSSV 78
LWVL + G + +S SSS P VN+GALFT++S IGRA K A AAI+D+N+D S+
Sbjct: 17 LWVLPIQGAGRESFSRNSSSSSLPSSVNVGALFTYDSFIGRAAKLAFVAAIEDINADQSI 76
Query: 77 LPGTRLNLIFHDTNCSGFLGTMEAL 3
L GT+LN++F DTNCSGF+GTM AL
Sbjct: 77 LRGTKLNIVFQDTNCSGFVGTMGAL 101
>ref|XP_002273744.2| PREDICTED: glutamate receptor 3.4-like [Vitis vinifera]
Length = 911
Score = 100 bits (249), Expect = 2e-19
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
Frame = -3
Query: 251 VLLVTGIWGFATGAS---SPSSSRPEGVNIGALFTFNSVIGRAVKPAIQAAIDDVNSDSS 81
+LL+ IW G + S SSS VNIGA+FT NS IGRA +PAI AAIDDVNSDSS
Sbjct: 5 LLLIFCIWVPILGRAQNASVSSSAANVVNIGAVFTLNSFIGRAAQPAILAAIDDVNSDSS 64
Query: 80 VLPGTRLNLIFHDTNCSGFLGTMEAL 3
+L G +LN+IF DTNCSGFLGT+EAL
Sbjct: 65 ILEGRKLNVIFQDTNCSGFLGTVEAL 90
>emb|CBI28943.3| unnamed protein product [Vitis vinifera]
Length = 1255
Score = 100 bits (249), Expect = 2e-19
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
Frame = -3
Query: 251 VLLVTGIWGFATGAS---SPSSSRPEGVNIGALFTFNSVIGRAVKPAIQAAIDDVNSDSS 81
+LL+ IW G + S SSS VNIGA+FT NS IGRA +PAI AAIDDVNSDSS
Sbjct: 18 LLLIFCIWVPILGRAQNASVSSSAANVVNIGAVFTLNSFIGRAAQPAILAAIDDVNSDSS 77
Query: 80 VLPGTRLNLIFHDTNCSGFLGTMEAL 3
+L G +LN+IF DTNCSGFLGT+EAL
Sbjct: 78 ILEGRKLNVIFQDTNCSGFLGTVEAL 103
>emb|CAN66741.1| hypothetical protein VITISV_021644 [Vitis vinifera]
Length = 949
Score = 100 bits (249), Expect = 2e-19
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
Frame = -3
Query: 251 VLLVTGIWGFATGAS---SPSSSRPEGVNIGALFTFNSVIGRAVKPAIQAAIDDVNSDSS 81
+LL+ IW G + S SSS VNIGA+FT NS IGRA +PAI AAIDDVNSDSS
Sbjct: 18 LLLIFCIWVPILGRAQNASVSSSAANVVNIGAVFTLNSFIGRAAQPAILAAIDDVNSDSS 77
Query: 80 VLPGTRLNLIFHDTNCSGFLGTMEAL 3
+L G +LN+IF DTNCSGFLGT+EAL
Sbjct: 78 ILEGRKLNVIFQDTNCSGFLGTVEAL 103
>dbj|BAC42828.1| putative ligand-gated ion channel protein [Arabidopsis thaliana]
Length = 669
Score = 100 bits (248), Expect = 3e-19
Identities = 54/109 (49%), Positives = 73/109 (66%), Gaps = 17/109 (15%)
Frame = -3
Query: 278 SAMRALLLWVLLVTGIW----------GFATGASSPSSS-------RPEGVNIGALFTFN 150
S +A+ + +L V+ +W F+ +SS SSS RP VN+GALFT++
Sbjct: 11 SMAKAIRVVLLCVSVLWVVPKECACRSNFSRNSSSSSSSSLRPLRQRPSSVNVGALFTYD 70
Query: 149 SVIGRAVKPAIQAAIDDVNSDSSVLPGTRLNLIFHDTNCSGFLGTMEAL 3
S IGRA KPA++AA+DDVN+D SVL G +LN+IF D+NCSGF+GTM AL
Sbjct: 71 SFIGRAAKPAVKAAMDDVNADQSVLKGIKLNIIFQDSNCSGFIGTMGAL 119