BLASTX nr result
ID: Rheum21_contig00028407
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00028407
(281 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006606948.1| PREDICTED: uncharacterized protein LOC102661... 76 5e-12
ref|XP_006574082.1| PREDICTED: uncharacterized protein LOC102670... 76 5e-12
ref|XP_006577642.1| PREDICTED: uncharacterized protein LOC102660... 74 3e-11
emb|CAN72257.1| hypothetical protein VITISV_034188 [Vitis vinifera] 56 3e-10
emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera] 54 2e-08
emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera] 60 2e-07
emb|CAN77153.1| hypothetical protein VITISV_021905 [Vitis vinifera] 60 4e-07
emb|CAN66625.1| hypothetical protein VITISV_032065 [Vitis vinifera] 60 4e-07
ref|XP_006494563.1| PREDICTED: uncharacterized protein LOC102631... 58 1e-06
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 57 3e-06
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 57 3e-06
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th... 57 3e-06
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana] 57 3e-06
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 57 3e-06
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 57 3e-06
emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera] 56 4e-06
emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera] 44 4e-06
ref|XP_006478065.1| PREDICTED: uncharacterized protein LOC102619... 56 6e-06
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 56 6e-06
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|... 55 7e-06
>ref|XP_006606948.1| PREDICTED: uncharacterized protein LOC102661023 [Glycine max]
Length = 592
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/60 (58%), Positives = 41/60 (68%)
Frame = +1
Query: 1 HSHNPQVNTHGLRPSDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGSDGTQ 180
H+ QVNT P D+L D+GA+HHVTNDF NLALH PYTGPD+LFMG+ G Q
Sbjct: 313 HTGQVQVNTATAGPLQHDFLFDSGATHHVTNDFDNLALHHPYTGPDSLFMGNGSGYSADQ 372
>ref|XP_006574082.1| PREDICTED: uncharacterized protein LOC102670255 [Glycine max]
Length = 567
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = +1
Query: 1 HSHNPQVNTHGLRPSDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDG 165
H+ QVNT + PS D+L D+GA+HHVTND NLALH PYTGPD+LFMG+ G
Sbjct: 147 HTGQVQVNTATVGPSQHDFLFDSGATHHVTNDLDNLALHHPYTGPDSLFMGNGSG 201
>ref|XP_006577642.1| PREDICTED: uncharacterized protein LOC102660980 [Glycine max]
Length = 311
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/55 (60%), Positives = 39/55 (70%)
Frame = +1
Query: 1 HSHNPQVNTHGLRPSDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDG 165
H+ QVNT PS D+L D+GA+HHVTND NL LH PYTGPD+LFMG+ G
Sbjct: 147 HTGQVQVNTATAGPSQHDFLFDSGATHHVTNDLDNLVLHHPYTGPDSLFMGNGSG 201
>emb|CAN72257.1| hypothetical protein VITISV_034188 [Vitis vinifera]
Length = 1259
Score = 55.8 bits (133), Expect(2) = 3e-10
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +1
Query: 49 PDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDG 165
P WL+D+GASHHVT+D SNL++H PY G D + +G G
Sbjct: 367 PTWLLDSGASHHVTSDLSNLSIHAPYNGSDDIMIGDGTG 405
Score = 34.3 bits (77), Expect(2) = 3e-10
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 152 DIKTGVTVLKGPCVDGVYVWP 214
D++TG T+LKG DGVY WP
Sbjct: 428 DLRTGATLLKGKTKDGVYEWP 448
>emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]
Length = 555
Score = 53.5 bits (127), Expect(2) = 2e-08
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +1
Query: 43 SDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGSDGT 177
++P WL+D+GASHHVT D +N++LH PYT D + +G DGT
Sbjct: 74 NNPSWLLDSGASHHVTTDLNNMSLHAPYTRSDDVMIG-----DGT 113
Score = 30.8 bits (68), Expect(2) = 2e-08
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 152 DIKTGVTVLKGPCVDGVYVWPRTIPTT 232
D++TG +L G DGVY WP P +
Sbjct: 137 DLRTGAILLTGNTKDGVYEWPAAQPAS 163
>emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera]
Length = 786
Score = 60.1 bits (144), Expect(2) = 2e-07
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +1
Query: 40 PSDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGS 168
P+ P WL+D+G SHHVT D SNL+LH PYTG D + +G DGS
Sbjct: 83 PTTPQWLLDSGVSHHVTTDLSNLSLHTPYTGSDDIMIG--DGS 123
Score = 20.4 bits (41), Expect(2) = 2e-07
Identities = 5/7 (71%), Positives = 7/7 (100%)
Frame = +2
Query: 260 QWHHKLG 280
+WHH+LG
Sbjct: 161 EWHHRLG 167
>emb|CAN77153.1| hypothetical protein VITISV_021905 [Vitis vinifera]
Length = 809
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +1
Query: 40 PSDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGS 168
P+ P WL+D+GASHHVT D SNL+LH PYTG D + +G DGS
Sbjct: 20 PTTPQWLLDSGASHHVTADLSNLSLHTPYTGFDDIMIG--DGS 60
>emb|CAN66625.1| hypothetical protein VITISV_032065 [Vitis vinifera]
Length = 555
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = +1
Query: 40 PSDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGS 168
PS P WL+D+GASHHV D SNL+LH PYTG D + +G DGS
Sbjct: 287 PSTPQWLLDSGASHHVIADLSNLSLHTPYTGSDDIMIG--DGS 327
>ref|XP_006494563.1| PREDICTED: uncharacterized protein LOC102631139 [Citrus sinensis]
Length = 133
Score = 58.2 bits (139), Expect = 1e-06
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +1
Query: 43 SDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDG 165
++P WL+D+GASHH+T D SNL+LH PYTG D + +G G
Sbjct: 74 NNPTWLLDSGASHHITTDLSNLSLHAPYTGSDDVMIGDGTG 114
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/42 (57%), Positives = 34/42 (80%)
Frame = +1
Query: 43 SDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGS 168
S +WL+D+GA+HH+T+DF+NL+LHQPYTG D + + DGS
Sbjct: 292 SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVA--DGS 331
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/42 (57%), Positives = 34/42 (80%)
Frame = +1
Query: 43 SDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGS 168
S +WL+D+GA+HH+T+DF+NL+LHQPYTG D + + DGS
Sbjct: 327 SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVA--DGS 366
>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
Length = 847
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/42 (57%), Positives = 34/42 (80%)
Frame = +1
Query: 43 SDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGS 168
S +WL+D+GA+HH+T+DF+NL+LHQPYTG D + + DGS
Sbjct: 292 SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVA--DGS 331
>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
Length = 1048
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/42 (57%), Positives = 34/42 (80%)
Frame = +1
Query: 43 SDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGS 168
S +WL+D+GA+HH+T+DF+NL+LHQPYTG D + + DGS
Sbjct: 322 SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVA--DGS 361
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/42 (57%), Positives = 34/42 (80%)
Frame = +1
Query: 43 SDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGS 168
S +WL+D+GA+HH+T+DF+NL+LHQPYTG D + + DGS
Sbjct: 327 SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVA--DGS 366
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/42 (57%), Positives = 34/42 (80%)
Frame = +1
Query: 43 SDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGS 168
S +WL+D+GA+HH+T+DF+NL+LHQPYTG D + + DGS
Sbjct: 327 SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVA--DGS 366
>emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera]
Length = 424
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +1
Query: 16 QVNTHGLRPSDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDG 165
Q N P + WL+D+GASHHVT D NLALH P+ G D + +G+ G
Sbjct: 276 QANVATTIPPNTTWLLDSGASHHVTTDLHNLALHSPFDGTDEIMIGNGSG 325
>emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]
Length = 1044
Score = 44.3 bits (103), Expect(2) = 4e-06
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 55 WLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDG 165
WL+D+ ASH++T D NL++H Y G D + +G G
Sbjct: 208 WLIDSAASHNITGDIKNLSIHSEYDGTDEVLLGDGTG 244
Score = 31.6 bits (70), Expect(2) = 4e-06
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Frame = +2
Query: 161 TGVTVLKGPCVDGVYVWPRTI--PTTHHL-----HLSAPAQWHHKLG 280
TGV +L+G C +GVY++P ++ P+T + ++ WH +LG
Sbjct: 250 TGVILLRGACENGVYIFPNSMVAPSTPKMVAYVHERTSIDGWHKRLG 296
>ref|XP_006478065.1| PREDICTED: uncharacterized protein LOC102619803 [Citrus sinensis]
Length = 259
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1
Query: 22 NTHGLRPSDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGSDGTQG 183
+T P + +WL+D+ ASHHVT+D +NL+ HQ Y GPD + +G DGS T G
Sbjct: 198 HTTAYTPHNGNWLMDSAASHHVTSDIANLSHHQNYEGPDNIMIG--DGSGFTHG 249
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/39 (58%), Positives = 33/39 (84%)
Frame = +1
Query: 52 DWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGS 168
+WL+D+GA+HH+T+DF+NL+LHQPYTG D + + DGS
Sbjct: 328 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMIA--DGS 364
>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
polyprotein [Arabidopsis thaliana]
gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
[Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 55.5 bits (132), Expect = 7e-06
Identities = 24/42 (57%), Positives = 33/42 (78%)
Frame = +1
Query: 43 SDPDWLVDTGASHHVTNDFSNLALHQPYTGPDALFMGHQDGS 168
S WL+D+GA+HH+T+DF+NL+LHQPYTG D + + DGS
Sbjct: 308 SSNSWLLDSGATHHITSDFNNLSLHQPYTGGDDVMV--VDGS 347