BLASTX nr result
ID: Rheum21_contig00028361
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00028361
(404 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA96273.1| Zinc finger, C3HC4 type family protein, expressed... 68 1e-09
gb|ABA91175.1| Zinc finger, C3HC4 type family protein [Oryza sat... 68 1e-09
ref|NP_001042381.2| Os01g0213000 [Oryza sativa Japonica Group] g... 67 2e-09
gb|EAY73004.1| hypothetical protein OsI_00877 [Oryza sativa Indi... 67 2e-09
ref|XP_004229697.1| PREDICTED: RING-H2 finger protein ATL34-like... 67 3e-09
dbj|BAD73152.1| hypothetical protein [Oryza sativa Japonica Group] 65 7e-09
gb|EAZ31565.1| hypothetical protein OsJ_15708 [Oryza sativa Japo... 65 7e-09
ref|XP_004968614.1| PREDICTED: E3 ubiquitin-protein ligase ATL41... 65 9e-09
gb|EMT01003.1| E3 ubiquitin-protein ligase Arkadia [Aegilops tau... 65 9e-09
ref|XP_002455531.1| hypothetical protein SORBIDRAFT_03g012750 [S... 65 9e-09
gb|EAY73006.1| hypothetical protein OsI_00879 [Oryza sativa Indi... 65 9e-09
tpg|DAA45706.1| TPA: putative RING zinc finger domain superfamil... 65 1e-08
gb|ABF95852.1| Zinc finger, C3HC4 type family protein [Oryza sat... 64 3e-08
tpg|DAA61257.1| TPA: putative RING zinc finger domain superfamil... 63 3e-08
ref|XP_003572979.1| PREDICTED: RING-H2 finger protein ATL3-like ... 63 3e-08
ref|XP_002454947.1| hypothetical protein SORBIDRAFT_03g001960 [S... 63 3e-08
ref|NP_001145817.1| uncharacterized protein LOC100279324 [Zea ma... 63 3e-08
ref|NP_001174945.1| Os06g0666500 [Oryza sativa Japonica Group] g... 63 5e-08
gb|EAZ37937.1| hypothetical protein OsJ_22287 [Oryza sativa Japo... 63 5e-08
ref|XP_004969995.1| PREDICTED: E3 ubiquitin-protein ligase ATL41... 62 6e-08
>gb|ABA96273.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group] gi|125535595|gb|EAY82083.1| hypothetical
protein OsI_37281 [Oryza sativa Indica Group]
gi|125575976|gb|EAZ17198.1| hypothetical protein
OsJ_32706 [Oryza sativa Japonica Group]
Length = 148
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/82 (40%), Positives = 45/82 (54%)
Frame = -1
Query: 311 PPEPPRWELDPSALPPPERIQEISAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVY 132
PP+P W D + R + ++ +C+IC G L+ +GERC TL C H FHK C+Y
Sbjct: 49 PPDPKIWLPDHAH----HRRRRDESSEMECSICLGELE-EGERCCTLAACRHEFHKECIY 103
Query: 131 IWLHKKATCPVCRRFYPFPVRS 66
WL + TCP+CR P S
Sbjct: 104 RWLANRNTCPLCRHISLPPASS 125
>gb|ABA91175.1| Zinc finger, C3HC4 type family protein [Oryza sativa Japonica
Group] gi|125533156|gb|EAY79704.1| hypothetical protein
OsI_34853 [Oryza sativa Indica Group]
Length = 145
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/82 (41%), Positives = 43/82 (52%)
Frame = -1
Query: 311 PPEPPRWELDPSALPPPERIQEISAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVY 132
PP+P W LP + ++C+IC G L+ +GERC TL C H FHK C+Y
Sbjct: 49 PPDPKIW------LPDHTHHRRQRDESSECSICLGELE-EGERCCTLVACRHEFHKECIY 101
Query: 131 IWLHKKATCPVCRRFYPFPVRS 66
WL TCP+CR P P S
Sbjct: 102 RWLANHNTCPLCRHM-PLPPAS 122
>ref|NP_001042381.2| Os01g0213000 [Oryza sativa Japonica Group]
gi|56201673|dbj|BAD73151.1| hypothetical protein [Oryza
sativa Japonica Group] gi|255672993|dbj|BAF04295.2|
Os01g0213000 [Oryza sativa Japonica Group]
Length = 166
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = -1
Query: 281 PSALPPPERIQEISAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVYIWLHKKATCP 102
P + PP R +AA +CA+C G+++ +GE LP C H FH CV WL + TCP
Sbjct: 82 PCFVLPPRRGGSAAAAAAECAVCLGAVE-EGETVRALPCCPHAFHARCVDAWLRLRPTCP 140
Query: 101 VCRRFYPFPVR 69
+CR P P R
Sbjct: 141 LCRADVPVPAR 151
>gb|EAY73004.1| hypothetical protein OsI_00877 [Oryza sativa Indica Group]
Length = 166
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = -1
Query: 281 PSALPPPERIQEISAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVYIWLHKKATCP 102
P + PP R +AA +CA+C G+++ +GE LP C H FH CV WL + TCP
Sbjct: 82 PCFVLPPRRGGSAAAAAAECAVCLGAVE-EGETVRALPCCPHAFHARCVDAWLRLRPTCP 140
Query: 101 VCRRFYPFPVR 69
+CR P P R
Sbjct: 141 LCRADVPVPAR 151
>ref|XP_004229697.1| PREDICTED: RING-H2 finger protein ATL34-like [Solanum lycopersicum]
Length = 144
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/69 (42%), Positives = 38/69 (55%)
Frame = -1
Query: 296 RWELDPSALPPPERIQEISAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVYIWLHK 117
RW + LPPP + CA+C ++G G++C LP CGH FH +CV WL
Sbjct: 27 RWFSPDNYLPPPFNVVVEEIGYCYCAVCLDEVNG-GDKCRQLPKCGHAFHAMCVDAWLEW 85
Query: 116 KATCPVCRR 90
TCP+CRR
Sbjct: 86 NWTCPICRR 94
>dbj|BAD73152.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 233
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 12/84 (14%)
Frame = -1
Query: 308 PEPPRWELDPSALP-----PPERIQE-------ISAACTDCAICTGSLDGDGERCSTLPL 165
P PPR+ LD +A+ P R ++ S++ +CA+C ++D +GE LP
Sbjct: 77 PTPPRFGLDAAAIARLPSFPYVRARDDGEVSDSASSSSVECAVCLSAVD-EGETVRQLPA 135
Query: 164 CGHRFHKVCVYIWLHKKATCPVCR 93
CGH FH+ C+ +WL +A+CPVCR
Sbjct: 136 CGHVFHRECIDMWLSSRASCPVCR 159
>gb|EAZ31565.1| hypothetical protein OsJ_15708 [Oryza sativa Japonica Group]
Length = 195
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 12/84 (14%)
Frame = -1
Query: 308 PEPPRWELDPSALP-----PPERIQE-------ISAACTDCAICTGSLDGDGERCSTLPL 165
P PPR+ LD +A+ P R ++ S++ +CA+C ++D +GE LP
Sbjct: 77 PTPPRFGLDAAAIARLPSFPYVRARDDGEVSDSASSSSVECAVCLSAVD-EGETVRQLPA 135
Query: 164 CGHRFHKVCVYIWLHKKATCPVCR 93
CGH FH+ C+ +WL +A+CPVCR
Sbjct: 136 CGHVFHRECIDMWLSSRASCPVCR 159
>ref|XP_004968614.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Setaria italica]
Length = 228
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = -1
Query: 242 SAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVYIWLHKKATCPVCR 93
+AA TDCA+C L DGE+ LP CGH FH CV WL + TCPVCR
Sbjct: 119 AAAATDCAVCLSEL-ADGEKVRALPSCGHVFHVECVDAWLRSRTTCPVCR 167
>gb|EMT01003.1| E3 ubiquitin-protein ligase Arkadia [Aegilops tauschii]
Length = 213
Score = 65.1 bits (157), Expect = 9e-09
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Frame = -1
Query: 308 PEPPRWELDPSALPPPERIQ--EISAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCV 135
PEPP EL +P E+ + E A + CA+C G ++ +G+ LP C H FH+ C+
Sbjct: 129 PEPPARELTADDIPACEQEEAAERPGAASGCAVCLGEME-NGDMVKRLPACLHMFHQHCI 187
Query: 134 YIWLHKKATCPVCR--RFYPFP 75
+WL +TCPVCR F P P
Sbjct: 188 DVWLRGHSTCPVCRFDVFAPLP 209
>ref|XP_002455531.1| hypothetical protein SORBIDRAFT_03g012750 [Sorghum bicolor]
gi|241927506|gb|EES00651.1| hypothetical protein
SORBIDRAFT_03g012750 [Sorghum bicolor]
Length = 261
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = -1
Query: 299 PRWELDPSALPP-PERIQEISAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVYIWL 123
PR LDP+ L P + + + A DCA+C L+ GE+ LP CGHRFH C+ W
Sbjct: 118 PRGGLDPAVLAAIPVVVVDDAGARGDCAVCLAELE-PGEKARALPRCGHRFHVECIDAWF 176
Query: 122 HKKATCPVCR 93
ATCP+CR
Sbjct: 177 RGNATCPLCR 186
>gb|EAY73006.1| hypothetical protein OsI_00879 [Oryza sativa Indica Group]
Length = 233
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Frame = -1
Query: 308 PEPPRWELDPSALP------------PPERIQEISAACTDCAICTGSLDGDGERCSTLPL 165
P PPR+ LD +A+ E S++ +CA+C ++D +GE LP
Sbjct: 77 PTPPRFGLDAAAIARLPSFPYVRARHDGEVSDSASSSSVECAVCLSAVD-EGETVRQLPA 135
Query: 164 CGHRFHKVCVYIWLHKKATCPVCR 93
CGH FH+ C+ +WL +A+CPVCR
Sbjct: 136 CGHVFHRECIDMWLSSRASCPVCR 159
>tpg|DAA45706.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 250
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = -1
Query: 287 LDPSALPPPERIQEISAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVYIWLHKKAT 108
LD +A+ R +E +AA DCA+C G L GE LP CGH FH CV +WL +T
Sbjct: 66 LDEAAIAALPR-EEAAAAGGDCAVCIGELAA-GEAARVLPRCGHAFHVECVDMWLRSHST 123
Query: 107 CPVCRR 90
CP+CRR
Sbjct: 124 CPLCRR 129
>gb|ABF95852.1| Zinc finger, C3HC4 type family protein [Oryza sativa Japonica
Group] gi|125543806|gb|EAY89945.1| hypothetical protein
OsI_11497 [Oryza sativa Indica Group]
Length = 128
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -1
Query: 290 ELDPSALPPPERIQEI-SAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVYIWLHKK 114
ELD SALP + +AA +CA+C G + DGER LP CGHRFH C+ W
Sbjct: 22 ELDISALPVFVHVAGCEAAAAVECAVCLGEVR-DGERGRLLPRCGHRFHVECIDRWFRAN 80
Query: 113 ATCPVCR 93
+TCP CR
Sbjct: 81 STCPFCR 87
>tpg|DAA61257.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 407
Score = 63.2 bits (152), Expect = 3e-08
Identities = 27/62 (43%), Positives = 36/62 (58%)
Frame = -1
Query: 278 SALPPPERIQEISAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVYIWLHKKATCPV 99
+A P + +E +A DCA+C D +R LPLCGH FH C+ +WL ATCP+
Sbjct: 167 AAAPASRKGKEKAAGPFDCAVCLSEF-ADHDRLRLLPLCGHAFHVACIDVWLRSSATCPL 225
Query: 98 CR 93
CR
Sbjct: 226 CR 227
>ref|XP_003572979.1| PREDICTED: RING-H2 finger protein ATL3-like [Brachypodium
distachyon]
Length = 148
Score = 63.2 bits (152), Expect = 3e-08
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = -1
Query: 263 PERIQEISAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVYIWLHKKATCPVCR 93
P+++ +CA+C +L DGERC+ LP CGH FH CV WL K CPVCR
Sbjct: 73 PDQLAAGEGGAGECAVCLEALR-DGERCAVLPRCGHGFHAECVGSWLRKSRLCPVCR 128
>ref|XP_002454947.1| hypothetical protein SORBIDRAFT_03g001960 [Sorghum bicolor]
gi|241926922|gb|EES00067.1| hypothetical protein
SORBIDRAFT_03g001960 [Sorghum bicolor]
Length = 435
Score = 63.2 bits (152), Expect = 3e-08
Identities = 28/50 (56%), Positives = 31/50 (62%)
Frame = -1
Query: 242 SAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVYIWLHKKATCPVCR 93
SAA DCA+C L DGE+ LP CGH FH CV WL + TCPVCR
Sbjct: 122 SAAAADCAVCLSEL-ADGEKVRALPDCGHVFHVDCVDAWLRSRTTCPVCR 170
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = -1
Query: 323 LARAPPEPPRWELDPSALPPPERIQEISAACTDCAICTGSLDGDGERCSTLPLCGHRFHK 144
+A P P R D +A E + AA +CA+C G LD +G+ LP C H FH+
Sbjct: 301 IAMLPCFPYRRHADTAA--DAEGSTSVPAAAAECAVCLGVLD-EGQMVRQLPGCKHVFHQ 357
Query: 143 VCVYIWLHKKATCPVCR 93
C+ +WL +A+CPVCR
Sbjct: 358 ECIDVWLASRASCPVCR 374
>ref|NP_001145817.1| uncharacterized protein LOC100279324 [Zea mays]
gi|219884539|gb|ACL52644.1| unknown [Zea mays]
Length = 407
Score = 63.2 bits (152), Expect = 3e-08
Identities = 27/62 (43%), Positives = 36/62 (58%)
Frame = -1
Query: 278 SALPPPERIQEISAACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVYIWLHKKATCPV 99
+A P + +E +A DCA+C D +R LPLCGH FH C+ +WL ATCP+
Sbjct: 167 AAAPASRKGKEKAAGPFDCAVCLSEF-ADHDRLRLLPLCGHAFHVACIDVWLRSSATCPL 225
Query: 98 CR 93
CR
Sbjct: 226 CR 227
>ref|NP_001174945.1| Os06g0666500 [Oryza sativa Japonica Group]
gi|52076527|dbj|BAD45404.1| RING zinc finger
protein-like [Oryza sativa Japonica Group]
gi|125556398|gb|EAZ02004.1| hypothetical protein
OsI_24035 [Oryza sativa Indica Group]
gi|255677304|dbj|BAH93673.1| Os06g0666500 [Oryza sativa
Japonica Group]
Length = 181
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/90 (37%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Frame = -1
Query: 326 CLARAPPEPPRW-----------ELDPSALPPPERIQEISAACTDCAICTGSLDGDGERC 180
C RA +P W D ALP + + + CAIC DGER
Sbjct: 66 CTRRAVADPVGWVEHRRAGAGLKREDVVALPVATYVASPAPSVAGCAICLSDF-ADGERV 124
Query: 179 STLPLCGHRFHKVCVYIWLHKKATCPVCRR 90
LP CGHRFH VC+ WL +CP CRR
Sbjct: 125 RLLPACGHRFHVVCIDRWLLAHCSCPTCRR 154
>gb|EAZ37937.1| hypothetical protein OsJ_22287 [Oryza sativa Japonica Group]
Length = 176
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/90 (37%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Frame = -1
Query: 326 CLARAPPEPPRW-----------ELDPSALPPPERIQEISAACTDCAICTGSLDGDGERC 180
C RA +P W D ALP + + + CAIC DGER
Sbjct: 61 CTRRAVADPVGWVEHRRAGAGLKREDVVALPVATYVASPAPSVAGCAICLSDF-ADGERV 119
Query: 179 STLPLCGHRFHKVCVYIWLHKKATCPVCRR 90
LP CGHRFH VC+ WL +CP CRR
Sbjct: 120 RLLPACGHRFHVVCIDRWLLAHCSCPTCRR 149
>ref|XP_004969995.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Setaria italica]
Length = 238
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/67 (46%), Positives = 38/67 (56%)
Frame = -1
Query: 236 ACTDCAICTGSLDGDGERCSTLPLCGHRFHKVCVYIWLHKKATCPVCRRFYPFPVRSKLN 57
ACT+CAIC G++ +GE LP CGH FH CV WL ++CPVCR P +
Sbjct: 110 ACTECAICLGNVQ-EGEVVRALPACGHVFHVPCVDTWLASSSSCPVCRAEVEPPPMEEGA 168
Query: 56 LLLKQEK 36
L QEK
Sbjct: 169 ARLVQEK 175