BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00028283
         (501 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636816.1| hypothetical protein MTR_061s1011 [Medicago ...    60   3e-07
gb|ACL53619.1| unknown [Zea mays]                                      57   3e-06
ref|XP_006595368.1| PREDICTED: putative ribonuclease H protein A...    56   6e-06
gb|EOY21370.1| Ribonuclease H-like superfamily protein [Theobrom...    55   7e-06
ref|XP_003638600.1| hypothetical protein MTR_138s0002 [Medicago ...    55   7e-06
gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]               55   1e-05

>ref|XP_003636816.1| hypothetical protein MTR_061s1011 [Medicago truncatula]
           gi|358348871|ref|XP_003638465.1| hypothetical protein
           MTR_133s1012 [Medicago truncatula]
           gi|355502751|gb|AES83954.1| hypothetical protein
           MTR_061s1011 [Medicago truncatula]
           gi|355504400|gb|AES85603.1| hypothetical protein
           MTR_133s1012 [Medicago truncatula]
          Length = 234

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
 Frame = -3

Query: 472 CGRCTLCPLKEETMIHVLYQCSAAREFWKLDPNLSSLIFAKKPISLWDWWCSINCILSQN 293
           C  C  C    E   H+   C  AR  W    +   L F   P     W C  + ++ + 
Sbjct: 104 CSNCVWCVSSNEFTSHIFLHCEMARRIWMKLMSRLDLNFIMPPNLFIHWECWSSGVMHKK 163

Query: 292 QLE----FWSTAIWLLWKNRNACIFNGSVLNYDQLLQAVILNSS 173
             +     W  AIW +WK +N CIFNG V ++D+++  V + SS
Sbjct: 164 IRKGLRMIWQAAIWSIWKAQNDCIFNGVVTSWDEVVDDVKVLSS 207


>gb|ACL53619.1| unknown [Zea mays]
          Length = 202

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
 Frame = -3

Query: 463 CTLCPLKEETMIHVLYQCSAAREFWKL---DPNLSSLIFAKKPISLWDWWC-SINCILSQ 296
           C LC  +EET+ H+L  C  AR+FW L      L +L       SL DWW  ++  +   
Sbjct: 76  CPLCDQEEETIQHLLISCVFARQFWYLLLRRSGLPNLSPDNALCSLKDWWSRAVEKVPRD 135

Query: 295 NQLEFWSTAI---WLLWKNRNACIFNG 224
            Q  F S  I   W LW++RN C+FNG
Sbjct: 136 LQSGFNSLVILGAWSLWRHRNDCVFNG 162


>ref|XP_006595368.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 420

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
 Frame = -3

Query: 478 IPCGRCTLCPLKEETMIHVLYQCSAAREFWKLDPNLSSLI--FAKKPIS---LWDWWCSI 314
           +P  RC LC ++EET+ H+++ CSA R  W    N  S +  F   PI+    +  W S 
Sbjct: 289 LPSDRCPLCDVEEETVGHIMFSCSATRSLWWEVLNWVSRVGPFPTDPINHFIQFSHWNSK 348

Query: 313 NCILSQNQLEFWSTAIWLLWKNRNACIFNGSVLNYDQLLQAVILNS 176
             I+ + ++  W      +WK+RN+ +FN  + + ++++   + ++
Sbjct: 349 RHIVKRWEV-LWIALSMTIWKHRNSVVFNNQIFSPEKVMDEALFHT 393


>gb|EOY21370.1| Ribonuclease H-like superfamily protein [Theobroma cacao]
          Length = 569

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/100 (30%), Positives = 45/100 (45%)
 Frame = -3

Query: 493 AHRKVIPCGRCTLCPLKEETMIHVLYQCSAAREFWKLDPNLSSLIFAKKPISLWDWWCSI 314
           +HRK+     C  C   EET  H+L  C  AR  W L              S++DW   +
Sbjct: 274 SHRKINVDNICVFCQEDEETDFHILCYCQFARATW-LSSKWGFRDTGAHSTSVFDWIFQV 332

Query: 313 NCILSQNQLEFWSTAIWLLWKNRNACIFNGSVLNYDQLLQ 194
           +C L    +   +  +W +WK RN  IF   ++N  Q+L+
Sbjct: 333 SCNLGPKDVGEIACILWAIWKARNLRIFGNQIMNPVQVLK 372


>ref|XP_003638600.1| hypothetical protein MTR_138s0002 [Medicago truncatula]
           gi|355504535|gb|AES85738.1| hypothetical protein
           MTR_138s0002 [Medicago truncatula]
          Length = 242

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
 Frame = -3

Query: 463 CTLCPLKEETMIHVLYQCSAAREFWKLDPNLSSLIFAKKPISLWDWWC----SINCILSQ 296
           C  C    E+  H+   C  AR  W        L F   P     W C    +IN  + +
Sbjct: 33  CVWCATVPESTSHIFLHCDMARNIWLNLMVWLDLNFVMPPNLFVHWECWAMGNINKKIRK 92

Query: 295 NQLEFWSTAIWLLWKNRNACIFNGSVLNYDQLLQAV 188
                W  AIW++WK RN  IFN  +  +D+L++ V
Sbjct: 93  GLRMIWQAAIWVIWKARNGFIFNNVIARWDELVEEV 128


>gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]
          Length = 2749

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
 Frame = -3

Query: 466  RCTLCPLKEETMIHVLYQCSAAREFW---KLDPNLSSLIFAKKPISLWDWW----CSINC 308
            RC LC   +ET+ H+L  C  AREFW    L  NL  L    +  +  +WW      ++ 
Sbjct: 2622 RCPLCDQDQETLDHMLIGCVFAREFWFKLLLQVNLQFLAPQSEDSAFLEWWRMLCIKVSG 2681

Query: 307  ILSQNQLEFWSTAIWLLWKNRNACIFN 227
            I            +W LWK RN C+F+
Sbjct: 2682 IARDGLNSLVILGVWTLWKQRNGCVFD 2708