BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00028270
         (386 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888838.1| pentatricopeptide repeat-containing protein ...    85   1e-14
ref|XP_006390769.1| hypothetical protein EUTSA_v10019712mg [Eutr...    81   1e-13
gb|EOY17085.1| Pentatricopeptide repeat (PPR-like) superfamily p...    81   1e-13
gb|EOY17079.1| Pentatricopeptide repeat (PPR-like) superfamily p...    81   2e-13
gb|EOY03311.1| Pentatricopeptide repeat (PPR-like) superfamily p...    80   3e-13
ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_002325518.2| pentatricopeptide repeat-containing family p...    78   1e-12
ref|NP_177302.1| pentatricopeptide repeat-containing protein [Ar...    78   1e-12
ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Caps...    75   7e-12
gb|EXC35649.1| hypothetical protein L484_001633 [Morus notabilis]      74   2e-11
ref|XP_003604235.1| Pentatricopeptide repeat-containing protein ...    74   3e-11
ref|XP_006478380.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_002528030.1| pentatricopeptide repeat-containing protein,...    72   6e-11
ref|XP_004308527.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
gb|ESW11652.1| hypothetical protein PHAVU_008G048400g [Phaseolus...    71   1e-10
ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
gb|EPS73900.1| hypothetical protein M569_00856 [Genlisea aurea]        71   2e-10
ref|XP_004507080.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10

>ref|XP_002888838.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334679|gb|EFH65097.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 688

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 9/104 (8%)
 Frame = -2

Query: 286 SSTHHSPLKHNKIFVIKSSP------RSPLSSVAKEENPNSNLGTLSF---LYKKNPHVL 134
           +S +H P +  K      SP      R P +S AK+  P            L+ KNPH +
Sbjct: 19  TSLNHRPYRSYKDGAPAKSPFRPSRTRRPSTSPAKKPKPFRERDAFPSSLPLHSKNPHSI 78

Query: 133 HKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           H++IQR AR+NNL +A+++LDYL+Q G+PVN TTFSA++AAC+R
Sbjct: 79  HRDIQRFARKNNLEDALTILDYLEQRGIPVNATTFSALLAACVR 122


>ref|XP_006390769.1| hypothetical protein EUTSA_v10019712mg [Eutrema salsugineum]
           gi|557087203|gb|ESQ28055.1| hypothetical protein
           EUTSA_v10019712mg [Eutrema salsugineum]
          Length = 688

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/110 (41%), Positives = 68/110 (61%), Gaps = 10/110 (9%)
 Frame = -2

Query: 301 PCLP-RSSTHHSPLKHNKIFVIKSSP----RSPLSSVAKEENPNSNLGTLSF-----LYK 152
           P LP  SS +H P +  K      SP    RS   S++  +NP       +F     L+ 
Sbjct: 13  PSLPVTSSLNHRPHRSLKDRAPAKSPARPSRSRRPSISPAKNPKPFRERDAFPSSLPLHS 72

Query: 151 KNPHVLHKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           KNP+++H++IQ  AR+N L +A+++LDYL+Q G+PVN TTFSA++AAC+R
Sbjct: 73  KNPYIIHRDIQNFARQNKLEDALTILDYLEQRGIPVNATTFSALLAACVR 122


>gb|EOY17085.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
           [Theobroma cacao]
          Length = 431

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 44/110 (40%), Positives = 66/110 (60%), Gaps = 11/110 (10%)
 Frame = -2

Query: 298 CLPRSSTHHSPLKHNKIFVIKSSPRSPL------SSVAKEENPNSNLGTLSF-----LYK 152
           CL  S  +    ++N+   IK+S RSP       +      +P       +F     L+ 
Sbjct: 12  CLHSSPPNPLFYRNNQFSKIKASARSPPKPQKDPTKFTHRRSPPPFFEKYAFPSPLPLHT 71

Query: 151 KNPHVLHKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           KNPH ++K+IQR AR+N L EA+++LDY+ Q G+PVNPTTFS+++AAC+R
Sbjct: 72  KNPHAIYKDIQRFARQNKLKEALAILDYVNQQGIPVNPTTFSSLLAACVR 121


>gb|EOY17079.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
           [Theobroma cacao]
          Length = 529

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 44/110 (40%), Positives = 67/110 (60%), Gaps = 11/110 (10%)
 Frame = -2

Query: 298 CLPRSSTHHSPLKHNKIFVIKSSPRSPL------SSVAKEENPNSNLGTLSF-----LYK 152
           CL  S  +    ++N+   IK+S RSPL      +  A   +P       +F     L+ 
Sbjct: 12  CLRSSPPNPLFYRNNQFSRIKASARSPLKPQKDSTKFAHRRSPPPFFEKNAFSSSLPLHT 71

Query: 151 KNPHVLHKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           KNPH ++K+IQR AR+N L EA+++LDY+   G+PVNPT+FS+++AAC+R
Sbjct: 72  KNPHAIYKDIQRFARQNKLKEALAILDYVDHQGIPVNPTSFSSLLAACVR 121


>gb|EOY03311.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 683

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 42/90 (46%), Positives = 59/90 (65%)
 Frame = -2

Query: 271 SPLKHNKIFVIKSSPRSPLSSVAKEENPNSNLGTLSFLYKKNPHVLHKEIQRLARRNNLN 92
           SP K  +   I +  RSP     K   P+S       L+ KNPH ++K+IQR AR+N L 
Sbjct: 37  SPPKPQRNPTIFAHRRSPPPFFEKNAFPSSLP-----LHTKNPHAIYKDIQRFARQNKLK 91

Query: 91  EAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           EA+++LDY+ Q G+PVNPTTFS+++AAC+R
Sbjct: 92  EALAILDYVDQQGIPVNPTTFSSLLAACVR 121


>ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Solanum lycopersicum]
          Length = 674

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 33/62 (53%), Positives = 49/62 (79%)
 Frame = -2

Query: 187 NSNLGTLSFLYKKNPHVLHKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAAC 8
           ++NL  L  ++ KNPH ++K+IQR A +N L EA+++LDYL   G+PVNPTTF+++IAAC
Sbjct: 51  HNNLRNLLSVHTKNPHAIYKDIQRFAHQNKLKEALTILDYLDHRGIPVNPTTFASLIAAC 110

Query: 7   IR 2
           +R
Sbjct: 111 VR 112


>ref|XP_002325518.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550317217|gb|EEE99899.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 678

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
 Frame = -2

Query: 298 CLPRSSTHHSPLKHNKIFVIKSSPRSPLSSVAKEENPNSNLGTLSF---------LYKKN 146
           C P++  + + + H +   IKSS ++      + +NPN                 L+KKN
Sbjct: 12  CFPQNPLNIN-ITHRQFSKIKSSTQT---QPVQTQNPNKKHQQFDERDAFPASLPLHKKN 67

Query: 145 PHVLHKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           P  ++K+IQR +R+N L +A+ ++DY+ Q G+PVNPTTFSA+IAACIR
Sbjct: 68  PQAIYKDIQRFSRKNQLKDALIIMDYMDQQGIPVNPTTFSALIAACIR 115


>ref|NP_177302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169718|sp|Q9C9I3.1|PP115_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g71460, chloroplastic; Flags: Precursor
           gi|12323723|gb|AAG51819.1|AC016163_8 unknown protein;
           45757-47826 [Arabidopsis thaliana]
           gi|332197082|gb|AEE35203.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 9/104 (8%)
 Frame = -2

Query: 286 SSTHHSPLKHNKIFVIKSSP------RSPLSSVAKEENPNSNLGTLSF---LYKKNPHVL 134
           +S +H P + +K      SP      R P +S AK+  P            L+ KNP+++
Sbjct: 20  TSLNHRPHRSDKDGAPAKSPIRPSRTRRPSTSPAKKPKPFRERDAFPSSLPLHSKNPYII 79

Query: 133 HKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           H++IQ  AR+NNL  A+++LDYL+Q G+PVN TTFSA++ AC+R
Sbjct: 80  HRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVR 123


>ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Capsella rubella]
           gi|482569787|gb|EOA33975.1| hypothetical protein
           CARUB_v10021470mg [Capsella rubella]
          Length = 688

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
 Frame = -2

Query: 235 SSPRSPLSSVAKEENPNSNLGTLSF---LYKKNPHVLHKEIQRLARRNNLNEAVSLLDYL 65
           S  R P +S A++  P            L+ KNP  +H++IQ  AR+NNL +A+++LDYL
Sbjct: 42  SRTRRPSTSPARKPKPFRERDAFPSSLPLHSKNPCSIHRDIQSFARKNNLEDALTILDYL 101

Query: 64  QQLGVPVNPTTFSAVIAACIR 2
           +Q G+PVN TTFSA++AAC+R
Sbjct: 102 EQRGIPVNATTFSALLAACVR 122


>gb|EXC35649.1| hypothetical protein L484_001633 [Morus notabilis]
          Length = 647

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 30/53 (56%), Positives = 45/53 (84%)
 Frame = -2

Query: 160 LYKKNPHVLHKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           L+ KNP  ++ +IQR AR+N L++A+++LDY+ Q G+PVNPTTF+A+IAAC+R
Sbjct: 33  LHSKNPRAVYSDIQRFARQNKLSQALTILDYMDQQGIPVNPTTFAALIAACVR 85


>ref|XP_003604235.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355505290|gb|AES86432.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 688

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 21/116 (18%)
 Frame = -2

Query: 286 SSTHHSPLKH--NKIFVIKSSP--------RSPLSSVAKEENPNSNLGTLSF-------- 161
           S + H P  H  NKIF  K S         + P  ++  + N  +N     F        
Sbjct: 8   SLSQHFPPNHKPNKIFNFKPSSSFKTTHQRKKPKFTIPNKNNNKNNNVKKPFSEEDAFPC 67

Query: 160 ---LYKKNPHVLHKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
              L+ KNP  ++K+I+  AR+N LNEA+++LDY+ Q G+PVN TTFS++IAACIR
Sbjct: 68  SLPLHNKNPISIYKDIKNFARQNKLNEALAILDYVDQNGIPVNATTFSSLIAACIR 123


>ref|XP_006478380.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Citrus sinensis]
          Length = 681

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 39/99 (39%), Positives = 63/99 (63%), Gaps = 9/99 (9%)
 Frame = -2

Query: 271 SPLKHN-KIFVIKSSPRSPLSSV---AKEENPNSNLGTLSF-----LYKKNPHVLHKEIQ 119
           +P+ +N + F +K+S   P S+     K+ +   +    +F     L++KNP  ++K+IQ
Sbjct: 21  NPISNNHQFFKLKASATKPESTYFQKRKKHHTKKSAEKDAFPSSLPLHEKNPRAIYKDIQ 80

Query: 118 RLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           R AR+N L EA+ +LDY+ Q G+PVN TTF+A+I AC+R
Sbjct: 81  RFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVR 119


>ref|XP_002528030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532560|gb|EEF34348.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 32/53 (60%), Positives = 43/53 (81%)
 Frame = -2

Query: 160 LYKKNPHVLHKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           L+ KNP  ++K+IQR  R+N L EA+ ++DYL+Q G+PVN TTFSA+IAACIR
Sbjct: 75  LHTKNPSAVYKDIQRFTRQNKLKEALIIMDYLEQQGIPVNATTFSALIAACIR 127


>ref|XP_004308527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 683

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
 Frame = -2

Query: 292 PRSSTHHSPLK--HNKIF---VIKSSPRSPLSSVAKEENPNSNLGTLSFLYKKNPHVLHK 128
           P ++T++  L   H++ F    +    R P S   ++  P S       L+ KNP  ++K
Sbjct: 25  PATATNYDNLNTPHHRAFNLHALSRRHRKPPSFEERDAFPESLP-----LHTKNPRAVYK 79

Query: 127 EIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           +IQR A +N LNEA+++LDYL Q G+PVN TTFS +I AC+R
Sbjct: 80  DIQRFAAQNKLNEALTILDYLDQQGIPVNATTFSHLITACVR 121


>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 716

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 28/53 (52%), Positives = 44/53 (83%)
 Frame = -2

Query: 160 LYKKNPHVLHKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           L+ KNPH +++++QR AR+N L EA++++DY+ Q G+PVN TTFS++I AC+R
Sbjct: 74  LHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVR 126


>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 696

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 28/53 (52%), Positives = 44/53 (83%)
 Frame = -2

Query: 160 LYKKNPHVLHKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           L+ KNPH +++++QR AR+N L EA++++DY+ Q G+PVN TTFS++I AC+R
Sbjct: 74  LHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVR 126


>gb|ESW11652.1| hypothetical protein PHAVU_008G048400g [Phaseolus vulgaris]
          Length = 674

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 32/53 (60%), Positives = 44/53 (83%)
 Frame = -2

Query: 160 LYKKNPHVLHKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           L+ KNP  ++K+I+R AR+N L EA+++LDY+ Q G+PV+ TTFSAVIAACIR
Sbjct: 65  LHNKNPIFIYKDIKRFARQNKLKEALTILDYVDQRGIPVDSTTFSAVIAACIR 117


>ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Glycine max]
          Length = 682

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
 Frame = -2

Query: 292 PRSSTHHS-------PLKHNKIFVIKSSPRSPLSSVAKEENPNSNLGTLSFLYKKNPHVL 134
           P S THH+       P KH          + P     K+  P+S       L+ KNP  +
Sbjct: 35  PPSKTHHTKPPRFTTPRKHRT--------KKPKPFTEKDAFPSSLP-----LHNKNPIFI 81

Query: 133 HKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
            K+I+R AR+N L EA+++LDY+ Q G+PV+ TTFS+V+AACIR
Sbjct: 82  FKDIKRFARQNKLKEALTILDYVDQRGIPVDATTFSSVVAACIR 125


>gb|EPS73900.1| hypothetical protein M569_00856 [Genlisea aurea]
          Length = 680

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 31/53 (58%), Positives = 44/53 (83%)
 Frame = -2

Query: 160 LYKKNPHVLHKEIQRLARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
           ++KKNPH++++EIQR A +NNL +A  LLDYL++  VPVN TTF ++I+ACIR
Sbjct: 61  IHKKNPHIIYREIQRFASQNNLRKAFILLDYLERNAVPVNVTTFVSLISACIR 113


>ref|XP_004507080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cicer arietinum]
          Length = 694

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
 Frame = -2

Query: 238 KSSPRSPLSSVAKEENP--------NSNLGTLSFL-----------YKKNPHVLHKEIQR 116
           +SSP S  ++  K+++P        N N+    FL           + KNP  ++K+I+ 
Sbjct: 31  QSSPPSITTTTHKKKSPKFTTTTNKNKNISEKPFLEEDAFPCSLPLHNKNPLFIYKDIKN 90

Query: 115 LARRNNLNEAVSLLDYLQQLGVPVNPTTFSAVIAACIR 2
            AR+N L EA+++LDY+ Q G+PVN TTFS++IAACIR
Sbjct: 91  FARQNKLKEALTILDYVDQQGIPVNATTFSSLIAACIR 128