BLASTX nr result

ID: Rheum21_contig00028248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00028248
         (287 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321989.1| hypothetical protein POPTR_0015s01350g [Popu...    60   4e-07
ref|XP_006401750.1| hypothetical protein EUTSA_v10012933mg [Eutr...    58   1e-06
ref|XP_002317787.2| hypothetical protein POPTR_0012s02430g [Popu...    58   1e-06
ref|XP_004502677.1| PREDICTED: KH domain-containing protein At4g...    58   1e-06
ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arab...    58   1e-06
ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabi...    58   1e-06
ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g...    58   1e-06
gb|ESW08501.1| hypothetical protein PHAVU_009G051000g [Phaseolus...    57   3e-06
gb|EOY23588.1| RNA-binding KH domain-containing protein [Theobro...    57   3e-06
gb|EMJ20144.1| hypothetical protein PRUPE_ppa002491mg [Prunus pe...    57   3e-06
ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g...    57   3e-06
ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatul...    56   4e-06

>ref|XP_002321989.1| hypothetical protein POPTR_0015s01350g [Populus trichocarpa]
           gi|222868985|gb|EEF06116.1| hypothetical protein
           POPTR_0015s01350g [Populus trichocarpa]
          Length = 685

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/32 (84%), Positives = 32/32 (100%)
 Frame = +3

Query: 3   EKVIRMSGTPDQAERAQSLLQGFLLSIQEDGP 98
           EK+I++SGTP+QAERAQSLLQGF+LSIQEDGP
Sbjct: 654 EKIIQISGTPEQAERAQSLLQGFILSIQEDGP 685


>ref|XP_006401750.1| hypothetical protein EUTSA_v10012933mg [Eutrema salsugineum]
           gi|557102840|gb|ESQ43203.1| hypothetical protein
           EUTSA_v10012933mg [Eutrema salsugineum]
          Length = 647

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   EKVIRMSGTPDQAERAQSLLQGFLLSIQEDGP 98
           + +IR+SGTP+QAERAQSLLQGF+LSIQEDGP
Sbjct: 616 QNIIRISGTPEQAERAQSLLQGFILSIQEDGP 647


>ref|XP_002317787.2| hypothetical protein POPTR_0012s02430g [Populus trichocarpa]
           gi|550326217|gb|EEE96007.2| hypothetical protein
           POPTR_0012s02430g [Populus trichocarpa]
          Length = 655

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   EKVIRMSGTPDQAERAQSLLQGFLLSIQEDGP 98
           EK+I++SGTP+QAERAQSLLQGF+LS QEDGP
Sbjct: 624 EKIIKISGTPEQAERAQSLLQGFILSTQEDGP 655


>ref|XP_004502677.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X2
           [Cicer arietinum]
          Length = 648

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   EKVIRMSGTPDQAERAQSLLQGFLLSIQEDGP 98
           EK+I++SGTP+QAERAQSLLQGF+LS QEDGP
Sbjct: 617 EKIIQLSGTPEQAERAQSLLQGFILSTQEDGP 648


>ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
           lyrata] gi|297310050|gb|EFH40474.1| hypothetical protein
           ARALYDRAFT_495374 [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   EKVIRMSGTPDQAERAQSLLQGFLLSIQEDGP 98
           + +IR+SGTP+QAERAQSLLQGF+LSIQEDGP
Sbjct: 621 QNIIRISGTPEQAERAQSLLQGFILSIQEDGP 652


>ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
           gi|17065220|gb|AAL32764.1| RNA-binding protein-like
           [Arabidopsis thaliana] gi|30725478|gb|AAP37761.1|
           At5g53060 [Arabidopsis thaliana]
           gi|332008915|gb|AED96298.1| RNA-binding KH
           domain-containing protein [Arabidopsis thaliana]
          Length = 652

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   EKVIRMSGTPDQAERAQSLLQGFLLSIQEDGP 98
           + +IR+SGTP+QAERAQSLLQGF+LSIQEDGP
Sbjct: 621 QNIIRISGTPEQAERAQSLLQGFILSIQEDGP 652


>ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus] gi|449517605|ref|XP_004165836.1| PREDICTED: KH
           domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 666

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/32 (78%), Positives = 32/32 (100%)
 Frame = +3

Query: 3   EKVIRMSGTPDQAERAQSLLQGFLLSIQEDGP 98
           +K+I++SGTP+QAERAQSLLQGF+LS+QEDGP
Sbjct: 635 QKIIQISGTPEQAERAQSLLQGFILSLQEDGP 666


>gb|ESW08501.1| hypothetical protein PHAVU_009G051000g [Phaseolus vulgaris]
          Length = 644

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/32 (78%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   EKVIRMSGTPDQAERAQSLLQGFLLSIQEDGP 98
           +K+I++SGTP+QAERAQSLLQGF+LS QEDGP
Sbjct: 613 QKIIQISGTPEQAERAQSLLQGFILSTQEDGP 644


>gb|EOY23588.1| RNA-binding KH domain-containing protein [Theobroma cacao]
          Length = 675

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/32 (78%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   EKVIRMSGTPDQAERAQSLLQGFLLSIQEDGP 98
           +K+I++SGTP+QAERAQSLLQGF+LS QEDGP
Sbjct: 644 QKIIQISGTPEQAERAQSLLQGFILSTQEDGP 675


>gb|EMJ20144.1| hypothetical protein PRUPE_ppa002491mg [Prunus persica]
          Length = 667

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/32 (78%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   EKVIRMSGTPDQAERAQSLLQGFLLSIQEDGP 98
           +K+I++SGTP+QAERAQSLLQGF+LS QEDGP
Sbjct: 636 QKIIQISGTPEQAERAQSLLQGFILSTQEDGP 667


>ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 644

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/32 (78%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   EKVIRMSGTPDQAERAQSLLQGFLLSIQEDGP 98
           +K+I++SGTP+QAERAQSLLQGF+LS QEDGP
Sbjct: 613 QKIIQISGTPEQAERAQSLLQGFILSTQEDGP 644


>ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
           gi|355491329|gb|AES72532.1| Poly(rC)-binding protein
           [Medicago truncatula]
          Length = 646

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = +3

Query: 3   EKVIRMSGTPDQAERAQSLLQGFLLSIQEDGP 98
           EK+I++SGTP+QAER QSLLQGF+LS QEDGP
Sbjct: 615 EKIIQISGTPEQAERGQSLLQGFILSTQEDGP 646


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