BLASTX nr result

ID: Rheum21_contig00028142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00028142
         (276 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006830011.1| hypothetical protein AMTR_s02909p00006680 [A...    79   6e-13
ref|XP_002863304.1| predicted protein [Arabidopsis lyrata subsp....    77   3e-12
gb|ESW05830.1| hypothetical protein PHAVU_011G213000g [Phaseolus...    75   9e-12
gb|EPS74535.1| hypothetical protein M569_00252, partial [Genlise...    65   7e-09
ref|XP_006849011.1| hypothetical protein AMTR_s00028p00129770 [A...    59   9e-07
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t...    57   2e-06
ref|XP_006857717.1| hypothetical protein AMTR_s00061p00179620 [A...    57   3e-06
ref|XP_003604155.1| hypothetical protein MTR_4g006050 [Medicago ...    55   7e-06

>ref|XP_006830011.1| hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]
           gi|548835773|gb|ERM97427.1| hypothetical protein
           AMTR_s02909p00006680 [Amborella trichopoda]
          Length = 82

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = -2

Query: 275 SPFNPLSKMRQKEGKSIDRPHHLHPVGTTRSLQGRLQHPG 156
           SPFNPLS+MRQKEGKS+DRPH LHPVGTTRS QGRL+HPG
Sbjct: 38  SPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRHPG 77


>ref|XP_002863304.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309138|gb|EFH39563.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 97

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = -2

Query: 275 SPFNPLSKMRQKEGKSIDRPHHLHPVGTTRSLQGRLQHPG 156
           SPFNPLS+MRQKEGKS+DRPH LHPVGTTRS QGRL++PG
Sbjct: 53  SPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPG 92


>gb|ESW05830.1| hypothetical protein PHAVU_011G213000g [Phaseolus vulgaris]
          Length = 60

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 33/41 (80%), Positives = 34/41 (82%)
 Frame = +1

Query: 154 SPGC*RRPWSDLVVPTGWR*WGRSMDFPSFCRILLKGLKGD 276
           +PGC RRPW DLVVPTGWR WGRSMD  SFC I LKGLKGD
Sbjct: 10  TPGCRRRPWGDLVVPTGWRRWGRSMDSFSFCHISLKGLKGD 50


>gb|EPS74535.1| hypothetical protein M569_00252, partial [Genlisea aurea]
          Length = 106

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/46 (69%), Positives = 34/46 (73%), Gaps = 6/46 (13%)
 Frame = -1

Query: 273 SLQPFE------QNAAKGRKIHRPTPSSPPRRNYEITPRTPSASRG 154
           +L PF       QN  KGRKIH PTPSSPPRRNYEITPR PSA+RG
Sbjct: 36  ALSPFNPLIEMRQNKRKGRKIHGPTPSSPPRRNYEITPRAPSAARG 81


>ref|XP_006849011.1| hypothetical protein AMTR_s00028p00129770 [Amborella trichopoda]
           gi|548852484|gb|ERN10592.1| hypothetical protein
           AMTR_s00028p00129770 [Amborella trichopoda]
          Length = 134

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = -1

Query: 267 QPFEQNAAKGRKIHRPTPSSPPRRNYEITPRTPSASR 157
           +PFE+N AKGRKI  PTPSSPP RNY+IT R PS  R
Sbjct: 88  KPFERNVAKGRKIRGPTPSSPPHRNYQITSRMPSTFR 124


>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
          Length = 405

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = -2

Query: 155 ECLSSLFKVFHSRGLIHGRKVAPSAPIISHLLFADDCIIFARANLNECQRI 3
           E LS+L     +RG IHG KV   AP++SHLLFAD+C +F RAN+ E QR+
Sbjct: 37  EGLSTLIHKEVNRGDIHGVKVCRGAPVVSHLLFADNCFLFCRANVVEAQRL 87


>ref|XP_006857717.1| hypothetical protein AMTR_s00061p00179620 [Amborella trichopoda]
           gi|548861813|gb|ERN19184.1| hypothetical protein
           AMTR_s00061p00179620 [Amborella trichopoda]
          Length = 113

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = -2

Query: 275 SPFNPLSKMRQKEGKSIDRPHHLHPVGTTRSLQGRL 168
           SPF PL +M QKE KS+ RPH LHP+GTTRS QGRL
Sbjct: 38  SPFTPLIEMWQKEEKSMGRPHRLHPIGTTRSSQGRL 73


>ref|XP_003604155.1| hypothetical protein MTR_4g006050 [Medicago truncatula]
           gi|355505210|gb|AES86352.1| hypothetical protein
           MTR_4g006050 [Medicago truncatula]
          Length = 169

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/30 (80%), Positives = 25/30 (83%)
 Frame = +1

Query: 154 SPGC*RRPWSDLVVPTGWR*WGRSMDFPSF 243
           +PGC RRPW DLVVPTGWR  GRSMDF SF
Sbjct: 9   TPGCRRRPWGDLVVPTGWRRGGRSMDFLSF 38


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