BLASTX nr result
ID: Rheum21_contig00027891
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00027891
(431 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004146850.1| PREDICTED: mediator of RNA polymerase II tra... 65 9e-09
ref|XP_006466021.1| PREDICTED: mediator of RNA polymerase II tra... 60 2e-07
ref|XP_006426559.1| hypothetical protein CICLE_v10026403mg [Citr... 60 2e-07
ref|XP_006426558.1| hypothetical protein CICLE_v10026403mg [Citr... 60 2e-07
ref|XP_002280177.1| PREDICTED: uncharacterized protein LOC100260... 60 2e-07
ref|XP_004297580.1| PREDICTED: mediator of RNA polymerase II tra... 59 9e-07
ref|XP_002327548.1| predicted protein [Populus trichocarpa] gi|5... 58 2e-06
gb|EPS69291.1| hypothetical protein M569_05477, partial [Genlise... 56 4e-06
ref|XP_006305564.1| hypothetical protein CARUB_v10010152mg [Caps... 56 4e-06
gb|AAG50844.1|AC073944_11 hypothetical protein [Arabidopsis thal... 56 4e-06
ref|XP_002894487.1| hypothetical protein ARALYDRAFT_474562 [Arab... 56 4e-06
ref|NP_175905.2| uncharacterized protein [Arabidopsis thaliana] ... 56 4e-06
gb|EOY27122.1| COP9 signalosome complex subunit 7 [Theobroma cacao] 55 7e-06
>ref|XP_004146850.1| PREDICTED: mediator of RNA polymerase II transcription subunit
9-like [Cucumis sativus]
Length = 133
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/35 (82%), Positives = 34/35 (97%)
Frame = -1
Query: 107 LASHFHLLHLVEKLADATENGTRDQQADALISEMN 3
LASHFHLLHLVEKLADA ENGTRDQQ+DAL++++N
Sbjct: 39 LASHFHLLHLVEKLADAIENGTRDQQSDALVNDLN 73
>ref|XP_006466021.1| PREDICTED: mediator of RNA polymerase II transcription subunit
9-like [Citrus sinensis]
Length = 173
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/35 (77%), Positives = 33/35 (94%)
Frame = -1
Query: 107 LASHFHLLHLVEKLADATENGTRDQQADALISEMN 3
LAS+FHLLHL+E LADA ENGTRDQQ+DAL++E+N
Sbjct: 79 LASNFHLLHLMENLADAIENGTRDQQSDALVNELN 113
>ref|XP_006426559.1| hypothetical protein CICLE_v10026403mg [Citrus clementina]
gi|557528549|gb|ESR39799.1| hypothetical protein
CICLE_v10026403mg [Citrus clementina]
Length = 209
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/35 (77%), Positives = 33/35 (94%)
Frame = -1
Query: 107 LASHFHLLHLVEKLADATENGTRDQQADALISEMN 3
LAS+FHLLHL+E LADA ENGTRDQQ+DAL++E+N
Sbjct: 138 LASNFHLLHLMENLADAIENGTRDQQSDALVNELN 172
>ref|XP_006426558.1| hypothetical protein CICLE_v10026403mg [Citrus clementina]
gi|567867875|ref|XP_006426560.1| hypothetical protein
CICLE_v10026403mg [Citrus clementina]
gi|557528548|gb|ESR39798.1| hypothetical protein
CICLE_v10026403mg [Citrus clementina]
gi|557528550|gb|ESR39800.1| hypothetical protein
CICLE_v10026403mg [Citrus clementina]
Length = 232
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/35 (77%), Positives = 33/35 (94%)
Frame = -1
Query: 107 LASHFHLLHLVEKLADATENGTRDQQADALISEMN 3
LAS+FHLLHL+E LADA ENGTRDQQ+DAL++E+N
Sbjct: 138 LASNFHLLHLMENLADAIENGTRDQQSDALVNELN 172
>ref|XP_002280177.1| PREDICTED: uncharacterized protein LOC100260024 [Vitis vinifera]
gi|147856497|emb|CAN78638.1| hypothetical protein
VITISV_031737 [Vitis vinifera]
gi|297743090|emb|CBI35957.3| unnamed protein product
[Vitis vinifera]
Length = 166
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -1
Query: 107 LASHFHLLHLVEKLADATENGTRDQQADALISEMN 3
LASHFHLLHLVE L+DA ENGTRDQ +DAL+ E+N
Sbjct: 72 LASHFHLLHLVENLSDAIENGTRDQHSDALVRELN 106
>ref|XP_004297580.1| PREDICTED: mediator of RNA polymerase II transcription subunit
9-like [Fragaria vesca subsp. vesca]
Length = 173
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -1
Query: 107 LASHFHLLHLVEKLADATENGTRDQQADALISEMN 3
LASHFHL HLVEKL+D+ E GTRD Q+DALIS++N
Sbjct: 79 LASHFHLFHLVEKLSDSVETGTRDPQSDALISDLN 113
>ref|XP_002327548.1| predicted protein [Populus trichocarpa]
gi|566160841|ref|XP_006385439.1| hypothetical protein
POPTR_0003s04510g [Populus trichocarpa]
gi|550342402|gb|ERP63236.1| hypothetical protein
POPTR_0003s04510g [Populus trichocarpa]
Length = 190
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -1
Query: 107 LASHFHLLHLVEKLADATENGTRDQQADALISEMN 3
LASHFHLL L E LADA ENGTRDQ +DAL++E+N
Sbjct: 96 LASHFHLLQLAENLADAIENGTRDQHSDALVNELN 130
>gb|EPS69291.1| hypothetical protein M569_05477, partial [Genlisea aurea]
Length = 92
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = -1
Query: 107 LASHFHLLHLVEKLADATENGTRDQQADALISEMN 3
LAS FHL HLVE LAD TENG RDQQ DAL++E+N
Sbjct: 4 LASLFHLQHLVENLADVTENGNRDQQTDALVTELN 38
>ref|XP_006305564.1| hypothetical protein CARUB_v10010152mg [Capsella rubella]
gi|482574275|gb|EOA38462.1| hypothetical protein
CARUB_v10010152mg [Capsella rubella]
Length = 172
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -1
Query: 107 LASHFHLLHLVEKLADATENGTRDQQADALISEMN 3
LASHFHL +VEKL DA ENGTRDQ +DAL++E+N
Sbjct: 78 LASHFHLYPMVEKLTDAIENGTRDQNSDALVTELN 112
>gb|AAG50844.1|AC073944_11 hypothetical protein [Arabidopsis thaliana]
Length = 234
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -1
Query: 107 LASHFHLLHLVEKLADATENGTRDQQADALISEMN 3
LASHFHL +VEKLAD ENGTRDQ +DAL++E+N
Sbjct: 150 LASHFHLYPMVEKLADVIENGTRDQNSDALVNELN 184
>ref|XP_002894487.1| hypothetical protein ARALYDRAFT_474562 [Arabidopsis lyrata subsp.
lyrata] gi|297340329|gb|EFH70746.1| hypothetical protein
ARALYDRAFT_474562 [Arabidopsis lyrata subsp. lyrata]
Length = 230
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -1
Query: 107 LASHFHLLHLVEKLADATENGTRDQQADALISEMN 3
LASHFHL +VEKLAD ENGTRDQ +DAL++E+N
Sbjct: 136 LASHFHLYPMVEKLADVIENGTRDQNSDALVTELN 170
>ref|NP_175905.2| uncharacterized protein [Arabidopsis thaliana]
gi|75158655|sp|Q8RWA2.1|MED9_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
9 gi|20260684|gb|AAM13240.1| unknown protein
[Arabidopsis thaliana] gi|30023712|gb|AAP13389.1|
At1g55080 [Arabidopsis thaliana]
gi|110742509|dbj|BAE99172.1| hypothetical protein
[Arabidopsis thaliana] gi|332195062|gb|AEE33183.1|
uncharacterized protein AT1G55080 [Arabidopsis thaliana]
Length = 244
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -1
Query: 107 LASHFHLLHLVEKLADATENGTRDQQADALISEMN 3
LASHFHL +VEKLAD ENGTRDQ +DAL++E+N
Sbjct: 150 LASHFHLYPMVEKLADVIENGTRDQNSDALVNELN 184
>gb|EOY27122.1| COP9 signalosome complex subunit 7 [Theobroma cacao]
Length = 162
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -1
Query: 107 LASHFHLLHLVEKLADATENGTRDQQADALISEMN 3
LASHFHLL LVE L DA +NG+RDQ +DALI+E+N
Sbjct: 68 LASHFHLLQLVENLGDAIDNGSRDQHSDALINELN 102