BLASTX nr result

ID: Rheum21_contig00027682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00027682
         (715 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158896.1| PREDICTED: putative F-box protein At1g65770-...    57   6e-06
ref|XP_004134837.1| PREDICTED: putative F-box protein At1g65770-...    57   6e-06

>ref|XP_004158896.1| PREDICTED: putative F-box protein At1g65770-like [Cucumis sativus]
          Length = 401

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 26/142 (18%)
 Frame = +2

Query: 101 DLCNILSKDIISYNGKLFAVDQWGGAFVMDYDSLQMTRVAAPLFAESDPDRLVIKLVEAP 280
           D CN    D+I Y G+ +AVD+WG  F +D  S+++ + + PL    +       LVE  
Sbjct: 186 DHCNFHYDDVIVYKGQFYAVDRWGTIFWID-SSMKLVQFSPPLCGFGNQKH----LVECN 240

Query: 281 GQLHLV--------------------------VSSPNPIFEYDVKVYVLRSELEQWHEVK 382
           G+L++V                           SSP  I   D K++ L  E  +W EVK
Sbjct: 241 GELYVVDRFLDKEPLLWNADIFHIHWLNNLIEDSSPKVI---DFKLHRLDQEWGRWVEVK 297

Query: 383 DLGDQVFIRCENHCFSVARDLF 448
           +LG++ F+   + CFSV+   F
Sbjct: 298 NLGNESFVLGNDCCFSVSTPYF 319


>ref|XP_004134837.1| PREDICTED: putative F-box protein At1g65770-like [Cucumis sativus]
          Length = 291

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 26/142 (18%)
 Frame = +2

Query: 101 DLCNILSKDIISYNGKLFAVDQWGGAFVMDYDSLQMTRVAAPLFAESDPDRLVIKLVEAP 280
           D CN    D+I Y G+ +AVD+WG  F +D  S+++ + + PL    +       LVE  
Sbjct: 92  DHCNFHYDDVIVYKGQFYAVDRWGTIFWID-SSMKLVQFSPPLCGFGNQKH----LVECN 146

Query: 281 GQLHLV--------------------------VSSPNPIFEYDVKVYVLRSELEQWHEVK 382
           G+L++V                           SSP  I   D K++ L  E  +W EVK
Sbjct: 147 GELYVVDRFLDKEPLLWNADIFHIHWLNNLIEDSSPKVI---DFKLHRLDQEWGRWVEVK 203

Query: 383 DLGDQVFIRCENHCFSVARDLF 448
           +LG++ F+   + CFSV+   F
Sbjct: 204 NLGNESFVLGNDCCFSVSTPYF 225


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