BLASTX nr result

ID: Rheum21_contig00027627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00027627
         (394 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                 59   9e-07
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607...    57   2e-06
ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614...    57   3e-06
ref|WP_008481407.1| hypothetical protein [Nitrolancetus hollandi...    56   4e-06

>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 23/42 (54%), Positives = 31/42 (73%)
 Frame = -3

Query: 392  GPNWEGPYRVVASPGNGSYKLEELSGRSVPRTWNTLNLKKFY 267
            G NWEGPYR+ +  G G+Y+LE+L GR V R WN  NL+++Y
Sbjct: 1064 GTNWEGPYRITSVAGIGAYRLEDLDGRVVHRPWNVNNLRRYY 1105


>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
          Length = 1866

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/42 (54%), Positives = 30/42 (71%)
 Frame = -3

Query: 392  GPNWEGPYRVVASPGNGSYKLEELSGRSVPRTWNTLNLKKFY 267
            GP WEGPYRV+ + G G+YKL    GR V R+WN  +LKK++
Sbjct: 1824 GPKWEGPYRVIRATGPGAYKLAYQDGRDVKRSWNAEHLKKYF 1865


>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
          Length = 1089

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/42 (54%), Positives = 30/42 (71%)
 Frame = -3

Query: 392  GPNWEGPYRVVASPGNGSYKLEELSGRSVPRTWNTLNLKKFY 267
            GP WEGPYRV+ + G G+YKL    GR V R+WN  +LKK++
Sbjct: 1047 GPKWEGPYRVIRATGPGAYKLACQDGRDVKRSWNAEHLKKYF 1088


>ref|WP_008481407.1| hypothetical protein [Nitrolancetus hollandicus]
           gi|390170603|emb|CCF85985.1| hypothetical protein
           NITHO_6470001 [Nitrolancetus hollandicus Lb]
          Length = 60

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/42 (59%), Positives = 28/42 (66%)
 Frame = -3

Query: 392 GPNWEGPYRVVASPGNGSYKLEELSGRSVPRTWNTLNLKKFY 267
           G NWEGPY V     NG YKL++L  R V R WN +NLKKFY
Sbjct: 18  GINWEGPYIVTEVVRNGVYKLKDLEDRPVKRPWNVINLKKFY 59


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